RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 LOC100131303A0A0U1RQF7 123 aa9.36□□□□□ -0.91
PRPF18-202ENST00000378572 LINC01549A6NIU2 74 aa9.36□□□□□ -0.91
PRPF18-202ENST00000378572 TSHBP01222 138 aa9.36□□□□□ -0.91
PRPF18-202ENST00000378572 GYPEP15421 78 aa9.36□□□□□ -0.91
PRPF18-202ENST00000378572 FAM19A2Q8N3H0 131 aa9.36□□□□□ -0.91
PRPF18-202ENST00000378572 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.91
PRPF18-202ENST00000378572 COTL1Q14019 142 aa9.35□□□□□ -0.91
PRPF18-202ENST00000378572 TMEM97Q5BJF2 176 aa9.35□□□□□ -0.91
PRPF18-202ENST00000378572 GTSF1LQ9H1H1 148 aa9.35□□□□□ -0.91
PRPF18-202ENST00000378572 FABP4P15090 132 aa9.34□□□□□ -0.91
PRPF18-202ENST00000378572 PMCHL1Q16048 86 aa9.34□□□□□ -0.91
PRPF18-202ENST00000378572 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
PRPF18-202ENST00000378572 SH2D6Q7Z4S9 175 aa9.34□□□□□ -0.91
PRPF18-202ENST00000378572 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.92
PRPF18-202ENST00000378572 LEPROTL1O95214 131 aa9.34□□□□□ -0.92
PRPF18-202ENST00000378572 AKR1D1P51857 326 aa9.34□□□□□ -0.92
PRPF18-202ENST00000378572 IGHV3-38A0A0C4DH36 116 aa9.33□□□□□ -0.92
PRPF18-202ENST00000378572 NFE4Q86UQ8 179 aa9.33□□□□□ -0.92
PRPF18-202ENST00000378572 ATP6V0E2Q8NHE4 81 aa9.33□□□□□ -0.92
PRPF18-202ENST00000378572 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
PRPF18-202ENST00000378572 LYPD5Q6UWN5 251 aa9.32□□□□□ -0.92
PRPF18-202ENST00000378572 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
PRPF18-202ENST00000378572 Q6ZRN7 208 aaPredicted RBP9.32□□□□□ -0.92
PRPF18-202ENST00000378572 LINC00469Q8N7U9 141 aa9.32□□□□□ -0.92
PRPF18-202ENST00000378572 C20orf203Q8NBC4 194 aa9.32□□□□□ -0.92
PRPF18-202ENST00000378572 HSPB8Q9UJY1 196 aa9.32□□□□□ -0.92
PRPF18-202ENST00000378572 CYSLTR1Q9Y271 337 aa9.32□□□□□ -0.92
PRPF18-202ENST00000378572 EPM2AB3EWF7 344 aa9.31□□□□□ -0.92
PRPF18-202ENST00000378572 SMIM6P0DI80 62 aa9.31□□□□□ -0.92
PRPF18-202ENST00000378572 CHCHD7Q9BUK0 85 aa9.31□□□□□ -0.92
PRPF18-202ENST00000378572 PGPEP1Q9NXJ5 209 aa9.31□□□□□ -0.92
PRPF18-202ENST00000378572 DNAH10OSP0CZ25 163 aa9.31□□□□□ -0.92
PRPF18-202ENST00000378572 NTM-AS1Q6ZSK4 140 aa9.31□□□□□ -0.92
PRPF18-202ENST00000378572 TRBV6-8A0A0A6YYG3 113 aa9.3□□□□□ -0.92
PRPF18-202ENST00000378572 ATP5LO75964 103 aa9.3□□□□□ -0.92
PRPF18-202ENST00000378572 WFDC10BQ8IUB3 73 aa9.3□□□□□ -0.92
PRPF18-202ENST00000378572 OR10D4PQ8NGN7 298 aa9.3□□□□□ -0.92
PRPF18-202ENST00000378572 TRBV25-1A0A075B6N4 114 aa9.29□□□□□ -0.92
PRPF18-202ENST00000378572 TIRAPP58753 221 aa9.29□□□□□ -0.92
PRPF18-202ENST00000378572 CDPF1Q6NVV7 123 aa9.29□□□□□ -0.92
PRPF18-202ENST00000378572 DEFB104AQ8WTQ1 72 aa9.29□□□□□ -0.92
PRPF18-202ENST00000378572 H7C423 109 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 NPSP0C0P6 89 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 ERASQ7Z444 233 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 TIMM17AQ99595 171 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 PYGO1Q9Y3Y4 419 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 A0A087WTM6 91 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 RPL39P62891 51 aaKnown RBP9.28□□□□□ -0.92
PRPF18-202ENST00000378572 SMAGPQ0VAQ4 97 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 LINC00173Q6ZV60 143 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 IFI27L1Q96BM0 104 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 SCGB3A1Q96QR1 104 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 TMEM243Q9BU79 118 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 TIMM21Q9BVV7 248 aa9.28□□□□□ -0.92
PRPF18-202ENST00000378572 IGIPA6NJ69 53 aa9.27□□□□□ -0.93
PRPF18-202ENST00000378572 LINC00587B1AMM8 73 aa9.27□□□□□ -0.93
PRPF18-202ENST00000378572 PSCAO43653 123 aa9.27□□□□□ -0.93
PRPF18-202ENST00000378572 C3orf79P0CE67 100 aa9.27□□□□□ -0.93
PRPF18-202ENST00000378572 TMEM141Q96I45 108 aa9.27□□□□□ -0.93
PRPF18-202ENST00000378572 MAP1LC3CQ9BXW4 147 aa9.27□□□□□ -0.93
PRPF18-202ENST00000378572 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.26□□□□□ -0.93
PRPF18-202ENST00000378572 MRPL52Q86TS9 123 aaKnown RBP9.26□□□□□ -0.93
PRPF18-202ENST00000378572 SPANXA1Q9NS26 97 aa9.26□□□□□ -0.93
PRPF18-202ENST00000378572 INAFM2P0DMQ5 153 aa9.25□□□□□ -0.93
PRPF18-202ENST00000378572 C10orf126Q8N4M7 172 aa9.25□□□□□ -0.93
PRPF18-202ENST00000378572 UBE2D4Q9Y2X8 147 aa9.25□□□□□ -0.93
PRPF18-202ENST00000378572 CSDC2Q9Y534 153 aaKnown RBP9.25□□□□□ -0.93
PRPF18-202ENST00000378572 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.25□□□□□ -0.93
PRPF18-202ENST00000378572 IGKV2-29A2NJV5 120 aaPredicted RBP9.25□□□□□ -0.93
PRPF18-202ENST00000378572 SYS1-DBNDD2H3BUS1 97 aa9.25□□□□□ -0.93
PRPF18-202ENST00000378572 LELP1Q5T871 98 aa9.25□□□□□ -0.93
PRPF18-202ENST00000378572 PET117Q6UWS5 81 aa9.25□□□□□ -0.93
PRPF18-202ENST00000378572 UBE2L6O14933 153 aa9.24□□□□□ -0.93
PRPF18-202ENST00000378572 ZNF25P17030 456 aaPredicted RBP9.24□□□□□ -0.93
PRPF18-202ENST00000378572 KRTAP10-1P60331 282 aa9.24□□□□□ -0.93
PRPF18-202ENST00000378572 KRTDAPP60985 99 aa9.24□□□□□ -0.93
PRPF18-202ENST00000378572 PAPPA-AS1Q5QFB9 102 aa9.24□□□□□ -0.93
PRPF18-202ENST00000378572 Q5VSD8 79 aa9.24□□□□□ -0.93
PRPF18-202ENST00000378572 K7EP13 123 aa9.23□□□□□ -0.93
PRPF18-202ENST00000378572 FGF6P10767 208 aa9.23□□□□□ -0.93
PRPF18-202ENST00000378572 PKIAP61925 76 aa9.23□□□□□ -0.93
PRPF18-202ENST00000378572 MRPS36P82909 103 aaKnown RBP9.23□□□□□ -0.93
PRPF18-202ENST00000378572 JOSD1Q15040 202 aaPredicted RBP9.23□□□□□ -0.93
PRPF18-202ENST00000378572 Q6ZN92 141 aa9.23□□□□□ -0.93
PRPF18-202ENST00000378572 GCSHP23434 173 aa9.22□□□□□ -0.93
PRPF18-202ENST00000378572 CHCHD5Q9BSY4 110 aa9.22□□□□□ -0.93
PRPF18-202ENST00000378572 Q9HAA7 133 aa9.22□□□□□ -0.93
PRPF18-202ENST00000378572 IGLV4-3A0A075B6K6 122 aa9.22□□□□□ -0.93
PRPF18-202ENST00000378572 IGLV5-52A0A0A0MRZ9 124 aa9.22□□□□□ -0.93
PRPF18-202ENST00000378572 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
PRPF18-202ENST00000378572 TRAV8-6A0A0B4J262 113 aa9.22□□□□□ -0.93
PRPF18-202ENST00000378572 PRSS1P07477 247 aa9.22□□□□□ -0.93
PRPF18-202ENST00000378572 HAMPP81172 84 aa9.22□□□□□ -0.93
PRPF18-202ENST00000378572 BAALCQ8WXS3 180 aa9.22□□□□□ -0.93
PRPF18-202ENST00000378572 A0A1B0GUV1 79 aa9.21□□□□□ -0.94
PRPF18-202ENST00000378572 XGP55808 180 aa9.21□□□□□ -0.94
PRPF18-202ENST00000378572 PYY3Q5JQD4 70 aa9.21□□□□□ -0.94
PRPF18-202ENST00000378572 LINC01545Q5VT33 79 aa9.21□□□□□ -0.94
PRPF18-202ENST00000378572 Q8N976 141 aa9.21□□□□□ -0.94
PRPF18-202ENST00000378572 FAM104AQ969W3 186 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms