RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
PCDHA1-201ENST00000378133 TRGV11A0A075B6L2 103 aa12.1□□□□□ -0.47
PCDHA1-201ENST00000378133 DEFB121Q5J5C9 76 aa12.1□□□□□ -0.47
PCDHA1-201ENST00000378133 TMEM61Q8N0U2 210 aa12.1□□□□□ -0.47
PCDHA1-201ENST00000378133 FBN2P35556 2912 aa12.1□□□□□ -0.47
PCDHA1-201ENST00000378133 DSCR9P59020 149 aa12.1□□□□□ -0.47
PCDHA1-201ENST00000378133 VSIG2Q96IQ7 327 aa12.1□□□□□ -0.47
PCDHA1-201ENST00000378133 FAM208BQ5VWN6 2430 aa12.1□□□□□ -0.47
PCDHA1-201ENST00000378133 FAM19A5Q7Z5A7 132 aaPredicted RBP12.1□□□□□ -0.47
PCDHA1-201ENST00000378133 LRRK2Q5S007 2527 aa12.09□□□□□ -0.47
PCDHA1-201ENST00000378133 DEFB136Q30KP8 78 aa12.09□□□□□ -0.47
PCDHA1-201ENST00000378133 DEFB131AP59861 70 aa12.09□□□□□ -0.47
PCDHA1-201ENST00000378133 C18orf65Q6ZTR6 163 aa12.09□□□□□ -0.47
PCDHA1-201ENST00000378133 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
PCDHA1-201ENST00000378133 SLURP1P55000 103 aa12.08□□□□□ -0.48
PCDHA1-201ENST00000378133 ZNF702PQ9H963 129 aa12.08□□□□□ -0.48
PCDHA1-201ENST00000378133 Q9UF83 564 aa12.08□□□□□ -0.48
PCDHA1-201ENST00000378133 WIPF1O43516 503 aa12.07□□□□□ -0.48
PCDHA1-201ENST00000378133 A0A096LNT2 108 aa12.07□□□□□ -0.48
PCDHA1-201ENST00000378133 TRBV7-7A0A0K0K1E9 115 aa12.07□□□□□ -0.48
PCDHA1-201ENST00000378133 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
PCDHA1-201ENST00000378133 DAND5Q8N907 189 aa12.07□□□□□ -0.48
PCDHA1-201ENST00000378133 TENM4Q6N022 2769 aa12.06□□□□□ -0.48
PCDHA1-201ENST00000378133 RNF152Q8N8N0 203 aa12.06□□□□□ -0.48
PCDHA1-201ENST00000378133 TMEM101Q96IK0 257 aa12.05□□□□□ -0.48
PCDHA1-201ENST00000378133 MYO9AB2RTY4 2548 aa12.05□□□□□ -0.48
PCDHA1-201ENST00000378133 J3QLI3 93 aa12.05□□□□□ -0.48
PCDHA1-201ENST00000378133 PLA2G2AP14555 144 aa12.05□□□□□ -0.48
PCDHA1-201ENST00000378133 Q6YL49 198 aa12.05□□□□□ -0.48
PCDHA1-201ENST00000378133 KLK5Q9Y337 293 aaPredicted RBP12.05□□□□□ -0.48
PCDHA1-201ENST00000378133 NACAE9PAV3 2078 aa12.04□□□□□ -0.48
PCDHA1-201ENST00000378133 RBMY1BA6NDE4 496 aaKnown RBP12.04□□□□□ -0.48
PCDHA1-201ENST00000378133 RBMY1EA6NEQ0 496 aaKnown RBP12.04□□□□□ -0.48
PCDHA1-201ENST00000378133 RBMY1DP0C7P1 496 aaKnown RBP12.04□□□□□ -0.48
PCDHA1-201ENST00000378133 Q6ZSN1 163 aa12.03□□□□□ -0.48
PCDHA1-201ENST00000378133 TEX15Q9BXT5 2789 aa12.03□□□□□ -0.48
PCDHA1-201ENST00000378133 KRTAP10-9P60411 292 aa12.03□□□□□ -0.48
PCDHA1-201ENST00000378133 PTPN13Q12923 2485 aa12.03□□□□□ -0.48
PCDHA1-201ENST00000378133 TIMM17BO60830 172 aa12.02□□□□□ -0.48
PCDHA1-201ENST00000378133 CITED2Q99967 270 aaPredicted RBP12.02□□□□□ -0.48
PCDHA1-201ENST00000378133 FAM236AA0A1B0GUQ0 79 aa12.02□□□□□ -0.49
PCDHA1-201ENST00000378133 FAM236BA0A1B0GV22 79 aa12.02□□□□□ -0.49
PCDHA1-201ENST00000378133 ACYP1P07311 99 aa12.02□□□□□ -0.49
PCDHA1-201ENST00000378133 HIST2H2BDQ6DRA6 164 aa12.02□□□□□ -0.49
PCDHA1-201ENST00000378133 UBE2D4Q9Y2X8 147 aa12.02□□□□□ -0.49
PCDHA1-201ENST00000378133 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.01□□□□□ -0.49
PCDHA1-201ENST00000378133 IGKV2-29A2NJV5 120 aaPredicted RBP12.01□□□□□ -0.49
PCDHA1-201ENST00000378133 HERVK_113P63121 156 aa12.01□□□□□ -0.49
PCDHA1-201ENST00000378133 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
PCDHA1-201ENST00000378133 CHCHD7Q9BUK0 85 aa12.01□□□□□ -0.49
PCDHA1-201ENST00000378133 EDA2RQ9HAV5 297 aa12.01□□□□□ -0.49
PCDHA1-201ENST00000378133 NDUFA7O95182 113 aa12□□□□□ -0.49
PCDHA1-201ENST00000378133 CDKN2A-AS1Q9UH64 79 aa12□□□□□ -0.49
PCDHA1-201ENST00000378133 CUBNO60494 3623 aa12□□□□□ -0.49
PCDHA1-201ENST00000378133 C9orf153Q5TBE3 101 aa12□□□□□ -0.49
PCDHA1-201ENST00000378133 IMUPQ9GZP8 106 aa12□□□□□ -0.49
PCDHA1-201ENST00000378133 J3QKU1 62 aa11.99□□□□□ -0.49
PCDHA1-201ENST00000378133 ABCA12Q86UK0 2595 aa11.99□□□□□ -0.49
PCDHA1-201ENST00000378133 NBPF19A0A087WUL8 3843 aa11.99□□□□□ -0.49
PCDHA1-201ENST00000378133 IGHV3-38A0A0C4DH36 116 aa11.98□□□□□ -0.49
PCDHA1-201ENST00000378133 J3KT08 172 aa11.98□□□□□ -0.49
PCDHA1-201ENST00000378133 NDUFA1O15239 70 aa11.98□□□□□ -0.49
PCDHA1-201ENST00000378133 FSHBP01225 129 aa11.98□□□□□ -0.49
PCDHA1-201ENST00000378133 KHDC1LQ5JSQ8 128 aa11.98□□□□□ -0.49
PCDHA1-201ENST00000378133 TLN2Q9Y4G6 2542 aa11.98□□□□□ -0.49
PCDHA1-201ENST00000378133 A8MTW9 85 aa11.98□□□□□ -0.49
PCDHA1-201ENST00000378133 IGHV4-31P0DP07 118 aa11.98□□□□□ -0.49
PCDHA1-201ENST00000378133 LINC00308Q8TCZ7 52 aa11.98□□□□□ -0.49
PCDHA1-201ENST00000378133 LINC00467Q9BRT7 94 aa11.98□□□□□ -0.49
PCDHA1-201ENST00000378133 A0A0U1RRA0 63 aa11.97□□□□□ -0.49
PCDHA1-201ENST00000378133 ZNF415Q09FC8 603 aa11.97□□□□□ -0.49
PCDHA1-201ENST00000378133 HIST2H2BCQ6DN03 193 aa11.97□□□□□ -0.49
PCDHA1-201ENST00000378133 COX7A2LO14548 114 aa11.97□□□□□ -0.49
PCDHA1-201ENST00000378133 LRRC75A-AS1Q8N1F1 130 aa11.97□□□□□ -0.49
PCDHA1-201ENST00000378133 NAV2Q8IVL1 2488 aa11.97□□□□□ -0.49
PCDHA1-201ENST00000378133 WNK1Q9H4A3 2382 aa11.97□□□□□ -0.49
PCDHA1-201ENST00000378133 SMCR5Q8TEV8 140 aa11.96□□□□□ -0.49
PCDHA1-201ENST00000378133 ZNF625Q96I27 306 aaPredicted RBP11.96□□□□□ -0.49
PCDHA1-201ENST00000378133 MAP6D1Q9H9H5 199 aa11.96□□□□□ -0.49
PCDHA1-201ENST00000378133 CR1P17927 2039 aa11.96□□□□□ -0.5
PCDHA1-201ENST00000378133 PEMTQ9UBM1 199 aa11.95□□□□□ -0.5
PCDHA1-201ENST00000378133 LINC00643Q86TS7 51 aa11.95□□□□□ -0.5
PCDHA1-201ENST00000378133 Q9H8V8 135 aa11.95□□□□□ -0.5
PCDHA1-201ENST00000378133 NOTCH3Q9UM47 2321 aa11.95□□□□□ -0.5
PCDHA1-201ENST00000378133 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.95□□□□□ -0.5
PCDHA1-201ENST00000378133 C11orf72Q8NBR9 251 aa11.95□□□□□ -0.5
PCDHA1-201ENST00000378133 DYNLRB2Q8TF09 96 aa11.95□□□□□ -0.5
PCDHA1-201ENST00000378133 TIRAPP58753 221 aa11.94□□□□□ -0.5
PCDHA1-201ENST00000378133 DAZ2Q13117 558 aaKnown RBP11.94□□□□□ -0.5
PCDHA1-201ENST00000378133 DAZ4Q86SG3 579 aaKnown RBP11.94□□□□□ -0.5
PCDHA1-201ENST00000378133 C3orf22Q8N5N4 141 aa11.94□□□□□ -0.5
PCDHA1-201ENST00000378133 DAZ3Q9NR90 486 aaKnown RBP11.94□□□□□ -0.5
PCDHA1-201ENST00000378133 DGAT2L7PQ6IED9 249 aa11.94□□□□□ -0.5
PCDHA1-201ENST00000378133 COX6A2Q02221 97 aa11.93□□□□□ -0.5
PCDHA1-201ENST00000378133 Q8N2B8 174 aa11.93□□□□□ -0.5
PCDHA1-201ENST00000378133 IGHV3-53P01767 116 aa11.93□□□□□ -0.5
PCDHA1-201ENST00000378133 BAALC-AS2P0C853 105 aa11.93□□□□□ -0.5
PCDHA1-201ENST00000378133 PIK3CD-AS1Q5SR53 167 aa11.93□□□□□ -0.5
PCDHA1-201ENST00000378133 IGLV5-45A0A087WSX0 123 aa11.92□□□□□ -0.5
PCDHA1-201ENST00000378133 F5H768 121 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms