RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SDIM1Q6ZPB5 146 aa3.6□□□□□ -1.83
PCDH9-201ENST00000377861 ANGP03950 147 aaKnown RBP3.6□□□□□ -1.83
PCDH9-201ENST00000377861 FANCMQ8IYD8 2048 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 LINC00959A0A1B0GUT2 108 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 FREM1Q5H8C1 2179 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 ETDCA0A1B0GVM5 59 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 RPL39P62891 51 aaKnown RBP3.59□□□□□ -1.83
PCDH9-201ENST00000377861 PRR15LQ9BU68 103 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 J3QKU1 62 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 IGHV3-64A0A075B6Q5 118 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 DEFB130BP0DP73 79 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 DEFB130AP0DP74 79 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 MAP6D1Q9H9H5 199 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 DOPEY1Q5JWR5 2465 aa3.59□□□□□ -1.83
PCDH9-201ENST00000377861 C11orf21Q9P2W6 132 aa3.59□□□□□ -1.84
PCDH9-201ENST00000377861 COL5A1P20908 1838 aaPredicted RBP3.59□□□□□ -1.84
PCDH9-201ENST00000377861 IGHV4-31P0DP07 118 aa3.59□□□□□ -1.84
PCDH9-201ENST00000377861 GYPEP15421 78 aa3.59□□□□□ -1.84
PCDH9-201ENST00000377861 SPTSSBQ8NFR3 76 aa3.59□□□□□ -1.84
PCDH9-201ENST00000377861 DPH3Q96FX2 82 aa3.59□□□□□ -1.84
PCDH9-201ENST00000377861 ZNF625Q96I27 306 aaPredicted RBP3.58□□□□□ -1.84
PCDH9-201ENST00000377861 REG3AQ06141 175 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 S4R3C0 116 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 IGLV1-51P01701 117 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 CAMK2N2Q96S95 79 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 LTBP2Q14767 1821 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 OBSCN-AS1Q96MR7 158 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 WDR81Q562E7 1941 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 IGHV3-38A0A0C4DH36 116 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 UPK3BQ9BT76 320 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 TNRC6AQ8NDV7 1962 aaKnown RBP3.58□□□□□ -1.84
PCDH9-201ENST00000377861 NAA38Q9BRA0 125 aaKnown RBP3.58□□□□□ -1.84
PCDH9-201ENST00000377861 ZNF407Q9C0G0 2248 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 CDIP1Q9H305 208 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 SMIM1B2RUZ4 78 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 MED12Q93074 2177 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 HILS1P60008 231 aa3.58□□□□□ -1.84
PCDH9-201ENST00000377861 ZNF73O43830 326 aaPredicted RBP3.57□□□□□ -1.84
PCDH9-201ENST00000377861 TRBV7-4A0A0J9YYF1 115 aa3.57□□□□□ -1.84
PCDH9-201ENST00000377861 HCG22E2RYF7 251 aa3.57□□□□□ -1.84
PCDH9-201ENST00000377861 XGP55808 180 aa3.57□□□□□ -1.84
PCDH9-201ENST00000377861 FAM30AQ9NZY2 134 aa3.57□□□□□ -1.84
PCDH9-201ENST00000377861 LECT2O14960 151 aa3.57□□□□□ -1.84
PCDH9-201ENST00000377861 XCL1P47992 114 aa3.57□□□□□ -1.84
PCDH9-201ENST00000377861 MT-ATP8P03928 68 aa3.57□□□□□ -1.84
PCDH9-201ENST00000377861 LINC00575Q6W349 94 aa3.57□□□□□ -1.84
PCDH9-201ENST00000377861 IGHV3OR16-8A0A075B7F1 116 aa3.57□□□□□ -1.84
PCDH9-201ENST00000377861 PLA2G2DQ9UNK4 145 aa3.57□□□□□ -1.84
PCDH9-201ENST00000377861 F5H768 121 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 MUC6Q6W4X9 2439 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 ABCA12Q86UK0 2595 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 ESM1Q9NQ30 184 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 TLN2Q9Y4G6 2542 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 KLKP1Q107X0 134 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 SMIM11BQ8TCY0 68 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 IGHV4-30-2A0A087WSY4 118 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 IGFL4Q6B9Z1 124 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 PCNX1Q96RV3 2341 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 KIAA2026Q5HYC2 2103 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 TICRRQ7Z2Z1 1910 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 SPRY2O43597 315 aa3.56□□□□□ -1.84
PCDH9-201ENST00000377861 A0A0U1RQV1 116 aa3.55□□□□□ -1.84
PCDH9-201ENST00000377861 TFF1P04155 84 aa3.55□□□□□ -1.84
PCDH9-201ENST00000377861 MED13LQ71F56 2210 aa3.55□□□□□ -1.84
PCDH9-201ENST00000377861 VPREB1P12018 145 aa3.55□□□□□ -1.84
PCDH9-201ENST00000377861 SPRNQ5BIV9 151 aa3.55□□□□□ -1.84
PCDH9-201ENST00000377861 TRANK1O15050 2925 aa3.55□□□□□ -1.84
PCDH9-201ENST00000377861 SEC61GP60059 68 aa3.55□□□□□ -1.84
PCDH9-201ENST00000377861 LY6G6DO95868 133 aa3.55□□□□□ -1.84
PCDH9-201ENST00000377861 B9D2Q9BPU9 175 aa3.55□□□□□ -1.84
PCDH9-201ENST00000377861 HEATR1Q9H583 2144 aaKnown RBP3.55□□□□□ -1.84
PCDH9-201ENST00000377861 CYP4F30PQ9H0H9 118 aa3.55□□□□□ -1.84
PCDH9-201ENST00000377861 C3orf56Q8N813 242 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 FAM236DA0A1B0GTK5 79 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 FAM236CP0DP71 79 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 SYCNQ0VAF6 134 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 WFDC9Q8NEX5 89 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 MPDZO75970 2070 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 LYPD5Q6UWN5 251 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 CHCHD10Q8WYQ3 142 aaPredicted RBP3.54□□□□□ -1.84
PCDH9-201ENST00000377861 FXYD7P58549 80 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 CLEC2BQ92478 149 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 EML6Q6ZMW3 1958 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 LY6HO94772 140 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 SPINK2P20155 84 aa3.54□□□□□ -1.84
PCDH9-201ENST00000377861 SPAG11BQ08648 103 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 LINC01006Q8NI28 216 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 TP53BP1Q12888 1972 aaPredicted RBP3.53□□□□□ -1.84
PCDH9-201ENST00000377861 PKD1L2Q7Z442 2459 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 A0A087X002 238 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 C6orf99Q4VX62 202 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 C2orf16Q68DN1 1984 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 A8MZ25 164 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 PSCAO43653 123 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 ZNF702PQ9H963 129 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 CCDC168Q8NDH2 2452 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 ADAMTSL4-AS1Q5T5F5 129 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 SPANXA2-OT1Q8N9U9 137 aa3.53□□□□□ -1.84
PCDH9-201ENST00000377861 PRR14LQ5THK1 2151 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms