RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ODF3L2Q3SX64 289 aa9.38□□□□□ -0.91
USP11-204ENST00000377107 AMELXQ99217 191 aa9.38□□□□□ -0.91
USP11-204ENST00000377107 IGHV3-33P01772 117 aa9.37□□□□□ -0.91
USP11-204ENST00000377107 UBE2L6O14933 153 aa9.37□□□□□ -0.91
USP11-204ENST00000377107 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
USP11-204ENST00000377107 CLEC2BQ92478 149 aa9.37□□□□□ -0.91
USP11-204ENST00000377107 RPL36AP83881 106 aaKnown RBP9.36□□□□□ -0.91
USP11-204ENST00000377107 RPL36ALQ969Q0 106 aaKnown RBP9.36□□□□□ -0.91
USP11-204ENST00000377107 SETXQ7Z333 2677 aaKnown RBP9.36□□□□□ -0.91
USP11-204ENST00000377107 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
USP11-204ENST00000377107 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
USP11-204ENST00000377107 Q9H8V8 135 aa9.36□□□□□ -0.91
USP11-204ENST00000377107 UBE2D4Q9Y2X8 147 aa9.36□□□□□ -0.91
USP11-204ENST00000377107 TRBV20-1A0A075B6N2 111 aa9.36□□□□□ -0.91
USP11-204ENST00000377107 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.36□□□□□ -0.91
USP11-204ENST00000377107 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
USP11-204ENST00000377107 MT-ATP8P03928 68 aa9.35□□□□□ -0.91
USP11-204ENST00000377107 UBE2D3P61077 147 aa9.35□□□□□ -0.91
USP11-204ENST00000377107 UBE2D2P62837 147 aa9.35□□□□□ -0.91
USP11-204ENST00000377107 TEN1Q86WV5 123 aa9.35□□□□□ -0.91
USP11-204ENST00000377107 PPDPFLQ8WWR9 84 aa9.35□□□□□ -0.91
USP11-204ENST00000377107 C11orf68Q9H3H3 251 aaKnown RBP9.35□□□□□ -0.91
USP11-204ENST00000377107 DEFB130BP0DP73 79 aa9.35□□□□□ -0.91
USP11-204ENST00000377107 DEFB130AP0DP74 79 aa9.35□□□□□ -0.91
USP11-204ENST00000377107 COX6A2Q02221 97 aa9.35□□□□□ -0.91
USP11-204ENST00000377107 LOC100131303A0A0U1RQF7 123 aa9.35□□□□□ -0.91
USP11-204ENST00000377107 TRGV4A0A0C4DH28 118 aa9.34□□□□□ -0.91
USP11-204ENST00000377107 COX6CP09669 75 aa9.34□□□□□ -0.91
USP11-204ENST00000377107 PRIMA1Q86XR5 153 aa9.34□□□□□ -0.91
USP11-204ENST00000377107 VSIG2Q96IQ7 327 aa9.34□□□□□ -0.91
USP11-204ENST00000377107 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
USP11-204ENST00000377107 RPL13AP40429 203 aaKnown RBP9.34□□□□□ -0.91
USP11-204ENST00000377107 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
USP11-204ENST00000377107 TRIAP1O43715 76 aa9.34□□□□□ -0.91
USP11-204ENST00000377107 GAGE6Q13070 117 aa9.34□□□□□ -0.91
USP11-204ENST00000377107 CIRBPQ14011 172 aaKnown RBP9.34□□□□□ -0.91
USP11-204ENST00000377107 C1orf158Q8N1D5 194 aa9.34□□□□□ -0.91
USP11-204ENST00000377107 SPANXA1Q9NS26 97 aa9.34□□□□□ -0.91
USP11-204ENST00000377107 MRPS36P82909 103 aaKnown RBP9.33□□□□□ -0.92
USP11-204ENST00000377107 CARD19Q96LW7 228 aa9.33□□□□□ -0.92
USP11-204ENST00000377107 A0A096LPF7 62 aa9.33□□□□□ -0.92
USP11-204ENST00000377107 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
USP11-204ENST00000377107 CR1P17927 2039 aa9.33□□□□□ -0.92
USP11-204ENST00000377107 ATXN8Q156A1 80 aa9.32□□□□□ -0.92
USP11-204ENST00000377107 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
USP11-204ENST00000377107 ESM1Q9NQ30 184 aa9.32□□□□□ -0.92
USP11-204ENST00000377107 TEX49A0A1B0GTD5 131 aa9.32□□□□□ -0.92
USP11-204ENST00000377107 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.32□□□□□ -0.92
USP11-204ENST00000377107 CKS1BP61024 79 aa9.31□□□□□ -0.92
USP11-204ENST00000377107 TMEM101Q96IK0 257 aa9.31□□□□□ -0.92
USP11-204ENST00000377107 CHCHD5Q9BSY4 110 aa9.31□□□□□ -0.92
USP11-204ENST00000377107 LINC01620Q4KN68 170 aa9.31□□□□□ -0.92
USP11-204ENST00000377107 PYGO1Q9Y3Y4 419 aa9.31□□□□□ -0.92
USP11-204ENST00000377107 TINCRA0A1B0GVN0 87 aa9.31□□□□□ -0.92
USP11-204ENST00000377107 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
USP11-204ENST00000377107 FSHBP01225 129 aa9.3□□□□□ -0.92
USP11-204ENST00000377107 XGP55808 180 aa9.3□□□□□ -0.92
USP11-204ENST00000377107 ICOSQ9Y6W8 199 aa9.3□□□□□ -0.92
USP11-204ENST00000377107 FAM104AQ969W3 186 aa9.3□□□□□ -0.92
USP11-204ENST00000377107 FHL3Q13643 280 aa9.3□□□□□ -0.92
USP11-204ENST00000377107 CLPSL2Q6UWE3 100 aa9.3□□□□□ -0.92
USP11-204ENST00000377107 UBR5O95071 2799 aaPredicted RBP9.29□□□□□ -0.92
USP11-204ENST00000377107 ZNF469Q96JG9 3925 aaPredicted RBP9.29□□□□□ -0.92
USP11-204ENST00000377107 K7EQD1 137 aa9.29□□□□□ -0.92
USP11-204ENST00000377107 A0A1B0GV72 72 aa9.29□□□□□ -0.92
USP11-204ENST00000377107 RS1O15537 224 aa9.28□□□□□ -0.92
USP11-204ENST00000377107 MIAQ16674 131 aa9.28□□□□□ -0.92
USP11-204ENST00000377107 SPATA25Q9BR10 227 aa9.28□□□□□ -0.92
USP11-204ENST00000377107 A0A0B4J2C4 111 aa9.28□□□□□ -0.92
USP11-204ENST00000377107 RNF152Q8N8N0 203 aa9.28□□□□□ -0.92
USP11-204ENST00000377107 SMR3AQ99954 134 aa9.28□□□□□ -0.92
USP11-204ENST00000377107 ATRQ13535 2644 aa9.27□□□□□ -0.93
USP11-204ENST00000377107 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
USP11-204ENST00000377107 LINC00242Q5T6M2 205 aa9.27□□□□□ -0.93
USP11-204ENST00000377107 CDIP1Q9H305 208 aa9.27□□□□□ -0.93
USP11-204ENST00000377107 CRLF1O75462 422 aa9.27□□□□□ -0.93
USP11-204ENST00000377107 PF4P02776 101 aa9.27□□□□□ -0.93
USP11-204ENST00000377107 PFN2P35080 140 aa9.27□□□□□ -0.93
USP11-204ENST00000377107 LINC01006Q8NI28 216 aa9.27□□□□□ -0.93
USP11-204ENST00000377107 DEFB4AO15263 64 aa9.26□□□□□ -0.93
USP11-204ENST00000377107 NTM-AS1Q6ZSK4 140 aa9.26□□□□□ -0.93
USP11-204ENST00000377107 C5orf38Q86SI9 138 aa9.26□□□□□ -0.93
USP11-204ENST00000377107 DNAJC30Q96LL9 226 aa9.26□□□□□ -0.93
USP11-204ENST00000377107 TMEM243Q9BU79 118 aa9.26□□□□□ -0.93
USP11-204ENST00000377107 HERVK_113P63121 156 aa9.26□□□□□ -0.93
USP11-204ENST00000377107 NBPF19A0A087WUL8 3843 aa9.26□□□□□ -0.93
USP11-204ENST00000377107 LINC00158P58513 81 aa9.25□□□□□ -0.93
USP11-204ENST00000377107 ZFAND6Q6FIF0 208 aa9.25□□□□□ -0.93
USP11-204ENST00000377107 LITAFQ99732 161 aa9.25□□□□□ -0.93
USP11-204ENST00000377107 SNCGO76070 127 aa9.25□□□□□ -0.93
USP11-204ENST00000377107 TRAV8-4A0A0B4J246 113 aa9.25□□□□□ -0.93
USP11-204ENST00000377107 UNC79Q9P2D8 2635 aa9.24□□□□□ -0.93
USP11-204ENST00000377107 CRYBA4P53673 196 aa9.24□□□□□ -0.93
USP11-204ENST00000377107 ATP6V0E2Q8NHE4 81 aa9.24□□□□□ -0.93
USP11-204ENST00000377107 UBE2WQ96B02 151 aa9.24□□□□□ -0.93
USP11-204ENST00000377107 OR13C6PQ8NH95 151 aa9.24□□□□□ -0.93
USP11-204ENST00000377107 BEAN1Q3B7T3 259 aa9.23□□□□□ -0.93
USP11-204ENST00000377107 Q8N2B8 174 aa9.23□□□□□ -0.93
USP11-204ENST00000377107 TTC32Q5I0X7 151 aa9.23□□□□□ -0.93
USP11-204ENST00000377107 TEX29Q8N6K0 151 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms