RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 TRBV6-5A0A0K0K1A5 114 aa10.87□□□□□ -0.67
HLA-A-201ENST00000376802 I3L3M4 83 aa10.87□□□□□ -0.67
HLA-A-201ENST00000376802 XCL1P47992 114 aa10.87□□□□□ -0.67
HLA-A-201ENST00000376802 SMIM15Q7Z3B0 74 aa10.87□□□□□ -0.67
HLA-A-201ENST00000376802 RNF213Q63HN8 5207 aa10.86□□□□□ -0.67
HLA-A-201ENST00000376802 CCL25O15444 150 aa10.86□□□□□ -0.67
HLA-A-201ENST00000376802 TSHBP01222 138 aa10.86□□□□□ -0.67
HLA-A-201ENST00000376802 PMCHP20382 165 aa10.86□□□□□ -0.67
HLA-A-201ENST00000376802 PEA15Q15121 130 aa10.85□□□□□ -0.67
HLA-A-201ENST00000376802 FAM231DQ6ZW35 169 aa10.85□□□□□ -0.67
HLA-A-201ENST00000376802 IGHV1-58A0A0C4DH39 117 aa10.84□□□□□ -0.67
HLA-A-201ENST00000376802 A8MWL6 223 aa10.84□□□□□ -0.67
HLA-A-201ENST00000376802 GATCO43716 136 aaKnown RBP10.84□□□□□ -0.67
HLA-A-201ENST00000376802 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
HLA-A-201ENST00000376802 EIF5A2Q9GZV4 153 aaKnown RBP10.84□□□□□ -0.67
HLA-A-201ENST00000376802 LINC00474Q9P2X8 69 aa10.84□□□□□ -0.67
HLA-A-201ENST00000376802 A0A0J9YXV3 536 aa10.84□□□□□ -0.67
HLA-A-201ENST00000376802 ATP6V1G1O75348 118 aa10.84□□□□□ -0.67
HLA-A-201ENST00000376802 SRSF9Q13242 221 aaKnown RBP eCLIP10.84□□□□□ -0.67
HLA-A-201ENST00000376802 TMEM101Q96IK0 257 aa10.84□□□□□ -0.67
HLA-A-201ENST00000376802 BTF3L4Q96K17 158 aa10.84□□□□□ -0.67
HLA-A-201ENST00000376802 CDC42SE2Q9NRR3 84 aa10.84□□□□□ -0.67
HLA-A-201ENST00000376802 TMEM242Q9NWH2 141 aa10.84□□□□□ -0.67
HLA-A-201ENST00000376802 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
HLA-A-201ENST00000376802 POLR2KP53803 58 aaKnown RBP10.83□□□□□ -0.68
HLA-A-201ENST00000376802 SPINK6Q6UWN8 80 aa10.83□□□□□ -0.68
HLA-A-201ENST00000376802 MRPL52Q86TS9 123 aaKnown RBP10.83□□□□□ -0.68
HLA-A-201ENST00000376802 CARD19Q96LW7 228 aa10.83□□□□□ -0.68
HLA-A-201ENST00000376802 SRSF3P84103 164 aaKnown RBP10.82□□□□□ -0.68
HLA-A-201ENST00000376802 CT83Q5H943 113 aa10.82□□□□□ -0.68
HLA-A-201ENST00000376802 CD164L2Q6UWJ8 174 aa10.82□□□□□ -0.68
HLA-A-201ENST00000376802 MRAP2Q96G30 205 aa10.82□□□□□ -0.68
HLA-A-201ENST00000376802 ST20Q9HBF5 79 aa10.82□□□□□ -0.68
HLA-A-201ENST00000376802 TRBV27A0A0K0K1C4 114 aa10.81□□□□□ -0.68
HLA-A-201ENST00000376802 SYCNQ0VAF6 134 aa10.81□□□□□ -0.68
HLA-A-201ENST00000376802 SS18Q15532 418 aa10.81□□□□□ -0.68
HLA-A-201ENST00000376802 TMEM191AQ9H0A3 160 aa10.81□□□□□ -0.68
HLA-A-201ENST00000376802 TMEM218A2RU14 115 aa10.8□□□□□ -0.68
HLA-A-201ENST00000376802 RAB4AP20338 218 aa10.8□□□□□ -0.68
HLA-A-201ENST00000376802 S100A1P23297 94 aa10.8□□□□□ -0.68
HLA-A-201ENST00000376802 ZNF664Q8N3J9 261 aa10.8□□□□□ -0.68
HLA-A-201ENST00000376802 PKIGQ9Y2B9 76 aa10.8□□□□□ -0.68
HLA-A-201ENST00000376802 A0A1B0GUT8 65 aa10.79□□□□□ -0.68
HLA-A-201ENST00000376802 HIGD1CA8MV81 97 aa10.79□□□□□ -0.68
HLA-A-201ENST00000376802 C9JQL5 133 aa10.79□□□□□ -0.68
HLA-A-201ENST00000376802 ZNF561-AS1K7EIQ3 104 aa10.79□□□□□ -0.68
HLA-A-201ENST00000376802 SRP19P09132 144 aaKnown RBP10.79□□□□□ -0.68
HLA-A-201ENST00000376802 CAMPP49913 170 aa10.78□□□□□ -0.68
HLA-A-201ENST00000376802 PTTG1IPP53801 180 aa10.78□□□□□ -0.68
HLA-A-201ENST00000376802 Q6ZRP5 223 aa10.78□□□□□ -0.68
HLA-A-201ENST00000376802 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
HLA-A-201ENST00000376802 IGLV4-69A0A075B6H9 119 aa10.77□□□□□ -0.69
HLA-A-201ENST00000376802 C7orf77A4D0Y5 90 aa10.77□□□□□ -0.69
HLA-A-201ENST00000376802 LCE2BO14633 110 aa10.77□□□□□ -0.69
HLA-A-201ENST00000376802 C10orf91Q5T1B1 145 aa10.77□□□□□ -0.69
HLA-A-201ENST00000376802 REG3GQ6UW15 175 aa10.77□□□□□ -0.69
HLA-A-201ENST00000376802 AMN1Q8IY45 258 aa10.77□□□□□ -0.69
HLA-A-201ENST00000376802 SEC11CQ9BY50 192 aa10.77□□□□□ -0.69
HLA-A-201ENST00000376802 CEBPGP53567 150 aa10.76□□□□□ -0.69
HLA-A-201ENST00000376802 LINC01551Q86U37 167 aa10.76□□□□□ -0.69
HLA-A-201ENST00000376802 BORCS7Q96B45 105 aa10.76□□□□□ -0.69
HLA-A-201ENST00000376802 CARHSP1Q9Y2V2 147 aaKnown RBP10.76□□□□□ -0.69
HLA-A-201ENST00000376802 LOC107984640A0A0U1RRK4 108 aa10.75□□□□□ -0.69
HLA-A-201ENST00000376802 A0A1W2PNN7 141 aa10.75□□□□□ -0.69
HLA-A-201ENST00000376802 SMKR1H3BMG3 65 aa10.75□□□□□ -0.69
HLA-A-201ENST00000376802 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
HLA-A-201ENST00000376802 UBE2D4Q9Y2X8 147 aa10.75□□□□□ -0.69
HLA-A-201ENST00000376802 CSDC2Q9Y534 153 aaKnown RBP10.75□□□□□ -0.69
HLA-A-201ENST00000376802 C1orf196B1AJZ1 125 aa10.74□□□□□ -0.69
HLA-A-201ENST00000376802 VCYO14598 125 aa10.74□□□□□ -0.69
HLA-A-201ENST00000376802 ADCYAP1P18509 176 aa10.74□□□□□ -0.69
HLA-A-201ENST00000376802 GAGE2BQ13066 116 aa10.74□□□□□ -0.69
HLA-A-201ENST00000376802 FAM74A3Q4VXF1 159 aa10.74□□□□□ -0.69
HLA-A-201ENST00000376802 NRACQ8N912 160 aa10.74□□□□□ -0.69
HLA-A-201ENST00000376802 SMIM7Q9BQ49 75 aa10.74□□□□□ -0.69
HLA-A-201ENST00000376802 OSTCQ9NRP0 149 aa10.74□□□□□ -0.69
HLA-A-201ENST00000376802 F8W036 122 aa10.73□□□□□ -0.69
HLA-A-201ENST00000376802 COX7A2LO14548 114 aa10.73□□□□□ -0.69
HLA-A-201ENST00000376802 RNASE13Q5GAN3 156 aaKnown RBP10.73□□□□□ -0.69
HLA-A-201ENST00000376802 MALP21145 153 aa10.72□□□□□ -0.69
HLA-A-201ENST00000376802 ISOC2Q96AB3 205 aa10.72□□□□□ -0.69
HLA-A-201ENST00000376802 V9GYV3 84 aa10.72□□□□□ -0.69
HLA-A-201ENST00000376802 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.71□□□□□ -0.69
HLA-A-201ENST00000376802 FCER1GP30273 86 aa10.71□□□□□ -0.69
HLA-A-201ENST00000376802 SUMO2P61956 95 aaKnown RBP10.71□□□□□ -0.69
HLA-A-201ENST00000376802 TRAV13-1A0A0B4J241 112 aa10.7□□□□□ -0.7
HLA-A-201ENST00000376802 APOMO95445 188 aa10.7□□□□□ -0.7
HLA-A-201ENST00000376802 C5orf38Q86SI9 138 aa10.7□□□□□ -0.7
HLA-A-201ENST00000376802 SVBPQ8N300 66 aa10.7□□□□□ -0.7
HLA-A-201ENST00000376802 C2orf48Q96LS8 159 aa10.7□□□□□ -0.7
HLA-A-201ENST00000376802 CAMK2N2Q96S95 79 aa10.7□□□□□ -0.7
HLA-A-201ENST00000376802 PSORS1C2Q9UIG4 136 aa10.7□□□□□ -0.7
HLA-A-201ENST00000376802 ZNF727A8MUV8 499 aa10.69□□□□□ -0.7
HLA-A-201ENST00000376802 RIGQ13278 110 aa10.69□□□□□ -0.7
HLA-A-201ENST00000376802 C9orf116Q5BN46 136 aaPredicted RBP10.69□□□□□ -0.7
HLA-A-201ENST00000376802 FAM104AQ969W3 186 aa10.69□□□□□ -0.7
HLA-A-201ENST00000376802 PPP1R17O96001 155 aa10.68□□□□□ -0.7
HLA-A-201ENST00000376802 PNRC1Q12796 327 aaPredicted RBP10.68□□□□□ -0.7
HLA-A-201ENST00000376802 Q6ZUT4 128 aa10.68□□□□□ -0.7
HLA-A-201ENST00000376802 TIMM21Q9BVV7 248 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms