RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 PAX4O43316 350 aa8.81□□□□□ -1
CLCN6-206ENST00000376496 MRAPQ8TCY5 172 aa8.81□□□□□ -1
CLCN6-206ENST00000376496 AMELXQ99217 191 aa8.81□□□□□ -1
CLCN6-206ENST00000376496 SPANXA1Q9NS26 97 aa8.81□□□□□ -1
CLCN6-206ENST00000376496 DNAH3Q8TD57 4116 aa8.81□□□□□ -1
CLCN6-206ENST00000376496 TRAV26-1A0A087WT03 109 aa8.81□□□□□ -1
CLCN6-206ENST00000376496 SPART-AS1P0CW21 52 aa8.81□□□□□ -1
CLCN6-206ENST00000376496 Q6ZVH6 145 aa8.81□□□□□ -1
CLCN6-206ENST00000376496 SBSPONQ8IVN8 264 aa8.81□□□□□ -1
CLCN6-206ENST00000376496 PRO0255Q9UI72 69 aa8.81□□□□□ -1
CLCN6-206ENST00000376496 TSPEAR-AS2P59090 65 aa8.8□□□□□ -1
CLCN6-206ENST00000376496 TMEM243Q9BU79 118 aa8.8□□□□□ -1
CLCN6-206ENST00000376496 IGKV3OR2-268A0A0C4DH90 116 aa8.8□□□□□ -1
CLCN6-206ENST00000376496 CIDEAO60543 219 aa8.8□□□□□ -1
CLCN6-206ENST00000376496 ZNF22P17026 224 aaPredicted RBP8.79□□□□□ -1
CLCN6-206ENST00000376496 CHCHD5Q9BSY4 110 aa8.79□□□□□ -1
CLCN6-206ENST00000376496 UBE2L6O14933 153 aa8.79□□□□□ -1
CLCN6-206ENST00000376496 DEFB121Q5J5C9 76 aa8.79□□□□□ -1
CLCN6-206ENST00000376496 AMMECR1LQ6DCA0 310 aa8.79□□□□□ -1
CLCN6-206ENST00000376496 ATP6V0E2Q8NHE4 81 aa8.79□□□□□ -1
CLCN6-206ENST00000376496 TRBV25-1A0A075B6N4 114 aa8.78□□□□□ -1
CLCN6-206ENST00000376496 TRBV6-8A0A0A6YYG3 113 aa8.78□□□□□ -1
CLCN6-206ENST00000376496 TRAV13-1A0A0B4J241 112 aa8.78□□□□□ -1
CLCN6-206ENST00000376496 ATP5G1P05496 136 aa8.78□□□□□ -1
CLCN6-206ENST00000376496 C2orf88Q9BSF0 95 aa8.78□□□□□ -1
CLCN6-206ENST00000376496 A8MZ25 164 aa8.78□□□□□ -1
CLCN6-206ENST00000376496 E9PLD3 99 aa8.78□□□□□ -1
CLCN6-206ENST00000376496 C12orf74Q32Q52 190 aa8.78□□□□□ -1
CLCN6-206ENST00000376496 NFE4Q86UQ8 179 aa8.78□□□□□ -1
CLCN6-206ENST00000376496 TRAV8-3A0A0A6YYJ7 113 aa8.77□□□□□ -1
CLCN6-206ENST00000376496 K7EIL1 84 aa8.77□□□□□ -1
CLCN6-206ENST00000376496 TMEM97Q5BJF2 176 aa8.77□□□□□ -1
CLCN6-206ENST00000376496 PAPPA-AS1Q5QFB9 102 aa8.77□□□□□ -1
CLCN6-206ENST00000376496 IGLV4-60A0A075B6I1 120 aa8.77□□□□□ -1.01
CLCN6-206ENST00000376496 K7EP13 123 aa8.77□□□□□ -1.01
CLCN6-206ENST00000376496 COX6A2Q02221 97 aa8.77□□□□□ -1.01
CLCN6-206ENST00000376496 BVES-AS1Q5T3Y7 98 aa8.77□□□□□ -1.01
CLCN6-206ENST00000376496 PLEKHB2Q96CS7 222 aa8.77□□□□□ -1.01
CLCN6-206ENST00000376496 GTSF1LQ9H1H1 148 aa8.77□□□□□ -1.01
CLCN6-206ENST00000376496 A0A0J9YWU9 116 aa8.77□□□□□ -1.01
CLCN6-206ENST00000376496 ZNF25P17030 456 aaPredicted RBP8.77□□□□□ -1.01
CLCN6-206ENST00000376496 Q8N3U1 123 aa8.77□□□□□ -1.01
CLCN6-206ENST00000376496 OR5A1Q8NGJ0 315 aa8.77□□□□□ -1.01
CLCN6-206ENST00000376496 TMEM223A0PJW6 202 aa8.76□□□□□ -1.01
CLCN6-206ENST00000376496 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
CLCN6-206ENST00000376496 DLEU1O43261 78 aa8.76□□□□□ -1.01
CLCN6-206ENST00000376496 UBE2D1P51668 147 aa8.76□□□□□ -1.01
CLCN6-206ENST00000376496 MRPS36P82909 103 aaKnown RBP8.76□□□□□ -1.01
CLCN6-206ENST00000376496 CDC42SE2Q9NRR3 84 aa8.76□□□□□ -1.01
CLCN6-206ENST00000376496 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
CLCN6-206ENST00000376496 Q6ZTC4 211 aa8.75□□□□□ -1.01
CLCN6-206ENST00000376496 LINC00469Q8N7U9 141 aa8.75□□□□□ -1.01
CLCN6-206ENST00000376496 MYMXA0A1B0GTQ4 84 aa8.75□□□□□ -1.01
CLCN6-206ENST00000376496 CDKN2A-AS1Q9UH64 79 aa8.75□□□□□ -1.01
CLCN6-206ENST00000376496 TMEM262E9PQX1 116 aa8.74□□□□□ -1.01
CLCN6-206ENST00000376496 HERVK_113P61574 105 aa8.74□□□□□ -1.01
CLCN6-206ENST00000376496 MRPL52Q86TS9 123 aaKnown RBP8.74□□□□□ -1.01
CLCN6-206ENST00000376496 TIMM21Q9BVV7 248 aa8.74□□□□□ -1.01
CLCN6-206ENST00000376496 NANOS2P60321 138 aaKnown RBP8.74□□□□□ -1.01
CLCN6-206ENST00000376496 CLPSL2Q6UWE3 100 aa8.74□□□□□ -1.01
CLCN6-206ENST00000376496 GEMIN7Q9H840 131 aaKnown RBP8.74□□□□□ -1.01
CLCN6-206ENST00000376496 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
CLCN6-206ENST00000376496 TMEM101Q96IK0 257 aa8.73□□□□□ -1.01
CLCN6-206ENST00000376496 J3QQQ9 107 aa8.73□□□□□ -1.01
CLCN6-206ENST00000376496 GCSHP23434 173 aa8.73□□□□□ -1.01
CLCN6-206ENST00000376496 COL5A1-AS1Q5SY13 56 aa8.73□□□□□ -1.01
CLCN6-206ENST00000376496 TINCRA0A1B0GVN0 87 aa8.72□□□□□ -1.01
CLCN6-206ENST00000376496 SCGB1D4Q6XE38 83 aa8.72□□□□□ -1.01
CLCN6-206ENST00000376496 SIVA1O15304 175 aa8.71□□□□□ -1.01
CLCN6-206ENST00000376496 IGHV3-30-3P0DP02 117 aa8.71□□□□□ -1.01
CLCN6-206ENST00000376496 LBHQ53QV2 105 aaPredicted RBP8.71□□□□□ -1.01
CLCN6-206ENST00000376496 CSDC2Q9Y534 153 aaKnown RBP8.71□□□□□ -1.01
CLCN6-206ENST00000376496 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.02
CLCN6-206ENST00000376496 FXYD2P54710 66 aa8.71□□□□□ -1.02
CLCN6-206ENST00000376496 NPSP0C0P6 89 aa8.7□□□□□ -1.02
CLCN6-206ENST00000376496 HSD52Q0P140 79 aa8.7□□□□□ -1.02
CLCN6-206ENST00000376496 LEPROTO15243 131 aa8.7□□□□□ -1.02
CLCN6-206ENST00000376496 RBX1P62877 108 aa8.7□□□□□ -1.02
CLCN6-206ENST00000376496 HIST1H4GQ99525 98 aa8.69□□□□□ -1.02
CLCN6-206ENST00000376496 HIGD1BQ9P298 99 aa8.69□□□□□ -1.02
CLCN6-206ENST00000376496 ORAOV1Q8WV07 137 aa8.69□□□□□ -1.02
CLCN6-206ENST00000376496 NAA38Q9BRA0 125 aaKnown RBP8.69□□□□□ -1.02
CLCN6-206ENST00000376496 K7ERJ3 54 aa8.68□□□□□ -1.02
CLCN6-206ENST00000376496 MRPL23Q16540 153 aaKnown RBP8.68□□□□□ -1.02
CLCN6-206ENST00000376496 ICOSQ9Y6W8 199 aa8.68□□□□□ -1.02
CLCN6-206ENST00000376496 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
CLCN6-206ENST00000376496 IGHV1-58A0A0C4DH39 117 aa8.67□□□□□ -1.02
CLCN6-206ENST00000376496 H7C423 109 aa8.67□□□□□ -1.02
CLCN6-206ENST00000376496 C10orf126Q8N4M7 172 aa8.67□□□□□ -1.02
CLCN6-206ENST00000376496 RAB37Q96AX2 223 aa8.67□□□□□ -1.02
CLCN6-206ENST00000376496 C11orf68Q9H3H3 251 aaKnown RBP8.67□□□□□ -1.02
CLCN6-206ENST00000376496 TIRAPP58753 221 aa8.67□□□□□ -1.02
CLCN6-206ENST00000376496 COL7A1Q02388 2944 aa8.67□□□□□ -1.02
CLCN6-206ENST00000376496 KPRPQ5T749 579 aaPredicted RBP8.67□□□□□ -1.02
CLCN6-206ENST00000376496 TAX1BP3O14907 124 aa8.67□□□□□ -1.02
CLCN6-206ENST00000376496 HERVK_113P63121 156 aa8.67□□□□□ -1.02
CLCN6-206ENST00000376496 PTTG1IPP53801 180 aa8.66□□□□□ -1.02
CLCN6-206ENST00000376496 CEND1Q8N111 149 aa8.66□□□□□ -1.02
CLCN6-206ENST00000376496 HUWE1Q7Z6Z7 4374 aaKnown RBP8.66□□□□□ -1.02
CLCN6-206ENST00000376496 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms