RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 CSDC2Q9Y534 153 aaKnown RBP14.78□□□□□ -0.04
HLA-C-201ENST00000376228 H7C423 109 aa14.77□□□□□ -0.04
HLA-C-201ENST00000376228 MRPS36P82909 103 aaKnown RBP14.77□□□□□ -0.04
HLA-C-201ENST00000376228 MRPL52Q86TS9 123 aaKnown RBP14.77□□□□□ -0.04
HLA-C-201ENST00000376228 ANKRD39Q53RE8 183 aa14.76□□□□□ -0.05
HLA-C-201ENST00000376228 LYSTQ99698 3801 aa14.76□□□□□ -0.05
HLA-C-201ENST00000376228 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.76□□□□□ -0.05
HLA-C-201ENST00000376228 IGKV2-29A2NJV5 120 aaPredicted RBP14.76□□□□□ -0.05
HLA-C-201ENST00000376228 STPG4Q8N801 248 aa14.76□□□□□ -0.05
HLA-C-201ENST00000376228 C14orf144Q96I85 54 aa14.76□□□□□ -0.05
HLA-C-201ENST00000376228 VCX2Q9H322 139 aa14.76□□□□□ -0.05
HLA-C-201ENST00000376228 IGLV4-69A0A075B6H9 119 aa14.75□□□□□ -0.05
HLA-C-201ENST00000376228 PAX4O43316 350 aa14.75□□□□□ -0.05
HLA-C-201ENST00000376228 GYPEP15421 78 aa14.75□□□□□ -0.05
HLA-C-201ENST00000376228 COX8AP10176 69 aa14.74□□□□□ -0.05
HLA-C-201ENST00000376228 ZC2HC1BQ5TFG8 222 aa14.74□□□□□ -0.05
HLA-C-201ENST00000376228 NFE4Q86UQ8 179 aa14.74□□□□□ -0.05
HLA-C-201ENST00000376228 OPRPNQ99935 248 aaPredicted RBP14.74□□□□□ -0.05
HLA-C-201ENST00000376228 SACSQ9NZJ4 4579 aa14.74□□□□□ -0.05
HLA-C-201ENST00000376228 DYNC2H1Q8NCM8 4307 aaKnown RBP14.74□□□□□ -0.05
HLA-C-201ENST00000376228 TRBV25-1A0A075B6N4 114 aa14.73□□□□□ -0.05
HLA-C-201ENST00000376228 ATP6V0E2Q8NHE4 81 aa14.73□□□□□ -0.05
HLA-C-201ENST00000376228 VSIG2Q96IQ7 327 aa14.73□□□□□ -0.05
HLA-C-201ENST00000376228 TMEM243Q9BU79 118 aa14.73□□□□□ -0.05
HLA-C-201ENST00000376228 TRBV6-8A0A0A6YYG3 113 aa14.72□□□□□ -0.05
HLA-C-201ENST00000376228 PLECQ15149 4684 aaKnown RBP14.72□□□□□ -0.05
HLA-C-201ENST00000376228 SLC25A34Q6PIV7 304 aa14.72□□□□□ -0.05
HLA-C-201ENST00000376228 C12orf74Q32Q52 190 aa14.71□□□□□ -0.05
HLA-C-201ENST00000376228 RYR2Q92736 4967 aa14.71□□□□□ -0.05
HLA-C-201ENST00000376228 TRAV26-1A0A087WT03 109 aa14.71□□□□□ -0.06
HLA-C-201ENST00000376228 DLEU1O43261 78 aa14.71□□□□□ -0.06
HLA-C-201ENST00000376228 CEMP1Q6PRD7 247 aaPredicted RBP14.71□□□□□ -0.06
HLA-C-201ENST00000376228 C11orf86A6NJI1 115 aa14.7□□□□□ -0.06
HLA-C-201ENST00000376228 FGF6P10767 208 aa14.7□□□□□ -0.06
HLA-C-201ENST00000376228 MRPS16Q9Y3D3 137 aaKnown RBP14.7□□□□□ -0.06
HLA-C-201ENST00000376228 ZNF25P17030 456 aaPredicted RBP14.69□□□□□ -0.06
HLA-C-201ENST00000376228 NANOS2P60321 138 aaKnown RBP14.69□□□□□ -0.06
HLA-C-201ENST00000376228 DGAT2L7PQ6IED9 249 aa14.69□□□□□ -0.06
HLA-C-201ENST00000376228 BOD1L2Q8IYS8 172 aa14.69□□□□□ -0.06
HLA-C-201ENST00000376228 F5H768 121 aa14.68□□□□□ -0.06
HLA-C-201ENST00000376228 Q6ZUT4 128 aa14.68□□□□□ -0.06
HLA-C-201ENST00000376228 SH2D6Q7Z4S9 175 aa14.68□□□□□ -0.06
HLA-C-201ENST00000376228 HNRNPA3P51991 378 aaKnown RBP14.67□□□□□ -0.06
HLA-C-201ENST00000376228 C11orf45Q8TAV5 145 aa14.67□□□□□ -0.06
HLA-C-201ENST00000376228 H3BNG1 76 aa14.66□□□□□ -0.06
HLA-C-201ENST00000376228 UBE2L6O14933 153 aa14.66□□□□□ -0.06
HLA-C-201ENST00000376228 C2orf88Q9BSF0 95 aa14.66□□□□□ -0.06
HLA-C-201ENST00000376228 HYDINQ4G0P3 5121 aa14.66□□□□□ -0.06
HLA-C-201ENST00000376228 IGKV2D-26A0A0A0MRZ7 120 aa14.66□□□□□ -0.06
HLA-C-201ENST00000376228 LCE6AA0A183 80 aa14.66□□□□□ -0.06
HLA-C-201ENST00000376228 E9PLD3 99 aa14.66□□□□□ -0.06
HLA-C-201ENST00000376228 MRPL23Q16540 153 aaKnown RBP14.66□□□□□ -0.06
HLA-C-201ENST00000376228 FAM19A3Q7Z5A8 133 aa14.66□□□□□ -0.06
HLA-C-201ENST00000376228 CDC42SE2Q9NRR3 84 aa14.66□□□□□ -0.06
HLA-C-201ENST00000376228 OR5A1Q8NGJ0 315 aa14.65□□□□□ -0.06
HLA-C-201ENST00000376228 CHAC1Q9BUX1 264 aa14.65□□□□□ -0.06
HLA-C-201ENST00000376228 A0A0J9YY99 117 aa14.64□□□□□ -0.07
HLA-C-201ENST00000376228 NUPR2A6NF83 97 aa14.64□□□□□ -0.07
HLA-C-201ENST00000376228 SIVA1O15304 175 aa14.64□□□□□ -0.07
HLA-C-201ENST00000376228 NMUP48645 174 aa14.64□□□□□ -0.07
HLA-C-201ENST00000376228 TMEM101Q96IK0 257 aa14.64□□□□□ -0.07
HLA-C-201ENST00000376228 A0A0J9YXV3 536 aa14.63□□□□□ -0.07
HLA-C-201ENST00000376228 TINCRA0A1B0GVN0 87 aa14.63□□□□□ -0.07
HLA-C-201ENST00000376228 HERVK_113P61574 105 aa14.63□□□□□ -0.07
HLA-C-201ENST00000376228 AMMECR1LQ6DCA0 310 aa14.63□□□□□ -0.07
HLA-C-201ENST00000376228 ICOSQ9Y6W8 199 aa14.63□□□□□ -0.07
HLA-C-201ENST00000376228 UBE2D1P51668 147 aa14.62□□□□□ -0.07
HLA-C-201ENST00000376228 ZNF22P17026 224 aaPredicted RBP14.61□□□□□ -0.07
HLA-C-201ENST00000376228 TIRAPP58753 221 aa14.61□□□□□ -0.07
HLA-C-201ENST00000376228 CTAG1AP78358 180 aa14.61□□□□□ -0.07
HLA-C-201ENST00000376228 PCP2Q8IVA1 136 aa14.61□□□□□ -0.07
HLA-C-201ENST00000376228 HTN3P15516 51 aa14.61□□□□□ -0.07
HLA-C-201ENST00000376228 TMEM170BQ5T4T1 132 aa14.61□□□□□ -0.07
HLA-C-201ENST00000376228 CHCHD5Q9BSY4 110 aa14.61□□□□□ -0.07
HLA-C-201ENST00000376228 A0A1B0GUV1 79 aa14.6□□□□□ -0.07
HLA-C-201ENST00000376228 SEC11AP67812 179 aa14.6□□□□□ -0.07
HLA-C-201ENST00000376228 RNASE13Q5GAN3 156 aaKnown RBP14.6□□□□□ -0.07
HLA-C-201ENST00000376228 A0A096LPF7 62 aa14.59□□□□□ -0.07
HLA-C-201ENST00000376228 TMEM223A0PJW6 202 aa14.59□□□□□ -0.07
HLA-C-201ENST00000376228 M0R143 59 aa14.59□□□□□ -0.07
HLA-C-201ENST00000376228 GAGE6Q13070 117 aa14.59□□□□□ -0.07
HLA-C-201ENST00000376228 Q6ZTC4 211 aa14.59□□□□□ -0.07
HLA-C-201ENST00000376228 C2orf91Q6ZV80 131 aa14.59□□□□□ -0.07
HLA-C-201ENST00000376228 IGLV5-45A0A087WSX0 123 aa14.58□□□□□ -0.08
HLA-C-201ENST00000376228 TCTAP57738 103 aa14.58□□□□□ -0.08
HLA-C-201ENST00000376228 LBHQ53QV2 105 aaPredicted RBP14.58□□□□□ -0.08
HLA-C-201ENST00000376228 HIGD1BQ9P298 99 aa14.58□□□□□ -0.08
HLA-C-201ENST00000376228 KLK5Q9Y337 293 aaPredicted RBP14.58□□□□□ -0.08
HLA-C-201ENST00000376228 ALMS1Q8TCU4 4167 aa14.57□□□□□ -0.08
HLA-C-201ENST00000376228 TP73-AS1Q9UF72 201 aa14.57□□□□□ -0.08
HLA-C-201ENST00000376228 SNHG12Q9BXW3 62 aa14.56□□□□□ -0.08
HLA-C-201ENST00000376228 HERVK_113P63121 156 aa14.55□□□□□ -0.08
HLA-C-201ENST00000376228 LINC00242Q5T6M2 205 aa14.55□□□□□ -0.08
HLA-C-201ENST00000376228 LELP1Q5T871 98 aa14.55□□□□□ -0.08
HLA-C-201ENST00000376228 GEMIN7Q9H840 131 aaKnown RBP14.55□□□□□ -0.08
HLA-C-201ENST00000376228 DNAH1Q9P2D7 4330 aa14.55□□□□□ -0.08
HLA-C-201ENST00000376228 TRAV8-6A0A0B4J262 113 aa14.54□□□□□ -0.08
HLA-C-201ENST00000376228 LEPROTO15243 131 aa14.54□□□□□ -0.08
HLA-C-201ENST00000376228 MAPKAPK5-AS1Q8N8E1 139 aa14.54□□□□□ -0.08
HLA-C-201ENST00000376228 IGLV4-60A0A075B6I1 120 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms