RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 IGHV1OR15-1A0A075B7D0 117 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 H3BMM0 161 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 SNCGO76070 127 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 LY6G6DO95868 133 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 RBMY1A1P0DJD3 496 aaKnown RBP12.31□□□□□ -0.44
PHF1-202ENST00000374516 RBMY1CP0DJD4 496 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 GAGE5Q13069 117 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 GAGE6Q13070 117 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 RBMY1FQ15415 496 aaKnown RBP12.31□□□□□ -0.44
PHF1-202ENST00000374516 SPXQ9BT56 116 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 MAP6D1Q9H9H5 199 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 TRAV4A0A0B4J268 109 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 TEX49A0A1B0GTD5 131 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 RBMY1BA6NDE4 496 aaKnown RBP12.31□□□□□ -0.44
PHF1-202ENST00000374516 RBMY1EA6NEQ0 496 aaKnown RBP12.31□□□□□ -0.44
PHF1-202ENST00000374516 PRM2P04554 102 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 RBMY1DP0C7P1 496 aaKnown RBP12.31□□□□□ -0.44
PHF1-202ENST00000374516 IGHV3-30-3P0DP02 117 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 C16orf95Q9H693 158 aa12.31□□□□□ -0.44
PHF1-202ENST00000374516 TRBV10-2A0A0K0K1G8 114 aa12.3□□□□□ -0.44
PHF1-202ENST00000374516 CRLF1O75462 422 aa12.3□□□□□ -0.44
PHF1-202ENST00000374516 ADARB2-AS1A8MUL3 147 aa12.29□□□□□ -0.44
PHF1-202ENST00000374516 TRIAP1O43715 76 aa12.29□□□□□ -0.44
PHF1-202ENST00000374516 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
PHF1-202ENST00000374516 LITAFQ99732 161 aa12.29□□□□□ -0.44
PHF1-202ENST00000374516 PRSS2P07478 247 aa12.29□□□□□ -0.44
PHF1-202ENST00000374516 TIMM21Q9BVV7 248 aa12.28□□□□□ -0.44
PHF1-202ENST00000374516 NDUFV3P56181 108 aaKnown RBP12.27□□□□□ -0.44
PHF1-202ENST00000374516 FAM104AQ969W3 186 aa12.27□□□□□ -0.44
PHF1-202ENST00000374516 NOTCH3Q9UM47 2321 aa12.27□□□□□ -0.44
PHF1-202ENST00000374516 HIVEP1P15822 2718 aa12.27□□□□□ -0.44
PHF1-202ENST00000374516 NSD1Q96L73 2696 aaPredicted RBP12.27□□□□□ -0.44
PHF1-202ENST00000374516 MRPS36P82909 103 aaKnown RBP12.27□□□□□ -0.45
PHF1-202ENST00000374516 ADAMTSL4-AS1Q5T5F5 129 aa12.27□□□□□ -0.45
PHF1-202ENST00000374516 SS18L2Q9UHA2 77 aa12.27□□□□□ -0.45
PHF1-202ENST00000374516 PYGO1Q9Y3Y4 419 aa12.27□□□□□ -0.45
PHF1-202ENST00000374516 TRAV8-4A0A0B4J246 113 aa12.26□□□□□ -0.45
PHF1-202ENST00000374516 TRAV8-3A0A0A6YYJ7 113 aa12.26□□□□□ -0.45
PHF1-202ENST00000374516 B5MCH6 92 aa12.26□□□□□ -0.45
PHF1-202ENST00000374516 ODF3L2Q3SX64 289 aa12.25□□□□□ -0.45
PHF1-202ENST00000374516 TTC32Q5I0X7 151 aa12.25□□□□□ -0.45
PHF1-202ENST00000374516 FN1P02751 2386 aaKnown RBP12.25□□□□□ -0.45
PHF1-202ENST00000374516 H7C423 109 aa12.25□□□□□ -0.45
PHF1-202ENST00000374516 UBE2WQ96B02 151 aa12.25□□□□□ -0.45
PHF1-202ENST00000374516 ICOSQ9Y6W8 199 aa12.25□□□□□ -0.45
PHF1-202ENST00000374516 IGHV1-58A0A0C4DH39 117 aa12.24□□□□□ -0.45
PHF1-202ENST00000374516 IFITM1P13164 125 aa12.24□□□□□ -0.45
PHF1-202ENST00000374516 Q6Q795 121 aa12.24□□□□□ -0.45
PHF1-202ENST00000374516 C2orf82Q6UX34 121 aa12.24□□□□□ -0.45
PHF1-202ENST00000374516 CEMP1Q6PRD7 247 aaPredicted RBP12.23□□□□□ -0.45
PHF1-202ENST00000374516 SPANXDQ9BXN6 97 aa12.23□□□□□ -0.45
PHF1-202ENST00000374516 SPANXCQ9NY87 97 aa12.23□□□□□ -0.45
PHF1-202ENST00000374516 C2CD3Q4AC94 2353 aa12.23□□□□□ -0.45
PHF1-202ENST00000374516 A8MTW9 85 aa12.23□□□□□ -0.45
PHF1-202ENST00000374516 INAFM1C9JVW0 142 aa12.23□□□□□ -0.45
PHF1-202ENST00000374516 PROK1P58294 105 aa12.23□□□□□ -0.45
PHF1-202ENST00000374516 NDUFA12Q9UI09 145 aa12.23□□□□□ -0.45
PHF1-202ENST00000374516 C15orf53Q8NAA6 179 aa12.22□□□□□ -0.45
PHF1-202ENST00000374516 TRGV11A0A075B6L2 103 aa12.22□□□□□ -0.45
PHF1-202ENST00000374516 COX6CP09669 75 aa12.22□□□□□ -0.45
PHF1-202ENST00000374516 GAGE12JA6NER3 117 aa12.21□□□□□ -0.45
PHF1-202ENST00000374516 GAGE7O76087 117 aa12.21□□□□□ -0.45
PHF1-202ENST00000374516 GAGE12FP0CL80 117 aa12.21□□□□□ -0.45
PHF1-202ENST00000374516 GAGE12GP0CL81 117 aa12.21□□□□□ -0.45
PHF1-202ENST00000374516 GAGE12IP0CL82 117 aa12.21□□□□□ -0.45
PHF1-202ENST00000374516 GAGE4Q13068 117 aa12.21□□□□□ -0.45
PHF1-202ENST00000374516 RNASE13Q5GAN3 156 aaKnown RBP12.21□□□□□ -0.45
PHF1-202ENST00000374516 VSIG2Q96IQ7 327 aa12.21□□□□□ -0.45
PHF1-202ENST00000374516 FLNBO75369 2602 aaKnown RBP12.21□□□□□ -0.45
PHF1-202ENST00000374516 IGHV3-73A0A0B4J1V6 119 aa12.21□□□□□ -0.46
PHF1-202ENST00000374516 TRAV25A0A0B4J276 109 aa12.21□□□□□ -0.46
PHF1-202ENST00000374516 MIAQ16674 131 aa12.21□□□□□ -0.46
PHF1-202ENST00000374516 XCL2Q9UBD3 114 aa12.21□□□□□ -0.46
PHF1-202ENST00000374516 VWFP04275 2813 aa12.21□□□□□ -0.46
PHF1-202ENST00000374516 LINC01587Q99440 93 aa12.2□□□□□ -0.46
PHF1-202ENST00000374516 A8MZ25 164 aa12.2□□□□□ -0.46
PHF1-202ENST00000374516 H3BT86 120 aa12.2□□□□□ -0.46
PHF1-202ENST00000374516 NDUFA7O95182 113 aa12.2□□□□□ -0.46
PHF1-202ENST00000374516 KRTAP10-3P60369 221 aa12.2□□□□□ -0.46
PHF1-202ENST00000374516 STHQ8IWL8 128 aa12.2□□□□□ -0.46
PHF1-202ENST00000374516 EDA2RQ9HAV5 297 aa12.2□□□□□ -0.46
PHF1-202ENST00000374516 TENM1Q9UKZ4 2725 aa12.19□□□□□ -0.46
PHF1-202ENST00000374516 TINCRA0A1B0GVN0 87 aa12.19□□□□□ -0.46
PHF1-202ENST00000374516 NPC2P61916 151 aa12.19□□□□□ -0.46
PHF1-202ENST00000374516 CCDC179H3BU77 68 aa12.19□□□□□ -0.46
PHF1-202ENST00000374516 CLEC2BQ92478 149 aa12.19□□□□□ -0.46
PHF1-202ENST00000374516 TNFRSF18Q9Y5U5 241 aa12.19□□□□□ -0.46
PHF1-202ENST00000374516 IGHV3OR16-12A0A075B7B8 117 aa12.17□□□□□ -0.46
PHF1-202ENST00000374516 LST1O00453 97 aa12.17□□□□□ -0.46
PHF1-202ENST00000374516 WFDC10AQ9H1F0 79 aa12.17□□□□□ -0.46
PHF1-202ENST00000374516 Q9UF83 564 aa12.17□□□□□ -0.46
PHF1-202ENST00000374516 INSP01308 110 aa12.16□□□□□ -0.46
PHF1-202ENST00000374516 UBE2D4Q9Y2X8 147 aa12.16□□□□□ -0.46
PHF1-202ENST00000374516 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.46
PHF1-202ENST00000374516 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
PHF1-202ENST00000374516 CHCHD7Q9BUK0 85 aa12.15□□□□□ -0.46
PHF1-202ENST00000374516 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.46
PHF1-202ENST00000374516 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
PHF1-202ENST00000374516 FAM240AA0A1B0GVK7 77 aa12.14□□□□□ -0.47
PHF1-202ENST00000374516 TIMM17BO60830 172 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms