RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TMEM101Q96IK0 257 aa8.51□□□□□ -1.05
CXCL12-202ENST00000374426 PTTG1IPP53801 180 aa8.5□□□□□ -1.05
CXCL12-202ENST00000374426 CD164L2Q6UWJ8 174 aa8.5□□□□□ -1.05
CXCL12-202ENST00000374426 CDC42SE2Q9NRR3 84 aa8.5□□□□□ -1.05
CXCL12-202ENST00000374426 ZNF561-AS1K7EIQ3 104 aa8.49□□□□□ -1.05
CXCL12-202ENST00000374426 SS18Q15532 418 aa8.49□□□□□ -1.05
CXCL12-202ENST00000374426 MRPL52Q86TS9 123 aaKnown RBP8.49□□□□□ -1.05
CXCL12-202ENST00000374426 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
CXCL12-202ENST00000374426 TMEM242Q9NWH2 141 aa8.49□□□□□ -1.05
CXCL12-202ENST00000374426 A0A1W2PNN7 141 aa8.48□□□□□ -1.05
CXCL12-202ENST00000374426 TAGLN2P37802 199 aaKnown RBP8.48□□□□□ -1.05
CXCL12-202ENST00000374426 CAMPP49913 170 aa8.48□□□□□ -1.05
CXCL12-202ENST00000374426 LOC107984640A0A0U1RRK4 108 aa8.47□□□□□ -1.05
CXCL12-202ENST00000374426 GAGE2BQ13066 116 aa8.47□□□□□ -1.05
CXCL12-202ENST00000374426 ZNF664Q8N3J9 261 aa8.47□□□□□ -1.05
CXCL12-202ENST00000374426 ST20Q9HBF5 79 aa8.47□□□□□ -1.05
CXCL12-202ENST00000374426 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
CXCL12-202ENST00000374426 A8MWL6 223 aa8.46□□□□□ -1.06
CXCL12-202ENST00000374426 GATCO43716 136 aaKnown RBP8.46□□□□□ -1.06
CXCL12-202ENST00000374426 POLR2KP53803 58 aaKnown RBP8.46□□□□□ -1.06
CXCL12-202ENST00000374426 FAM231DQ6ZW35 169 aa8.46□□□□□ -1.06
CXCL12-202ENST00000374426 FAM210AQ96ND0 272 aa8.46□□□□□ -1.06
CXCL12-202ENST00000374426 TRBV27A0A0K0K1C4 114 aa8.45□□□□□ -1.06
CXCL12-202ENST00000374426 C7orf77A4D0Y5 90 aa8.45□□□□□ -1.06
CXCL12-202ENST00000374426 NUP35Q8NFH5 326 aa8.45□□□□□ -1.06
CXCL12-202ENST00000374426 ISOC2Q96AB3 205 aa8.45□□□□□ -1.06
CXCL12-202ENST00000374426 PSORS1C2Q9UIG4 136 aa8.45□□□□□ -1.06
CXCL12-202ENST00000374426 COX7A2LO14548 114 aa8.44□□□□□ -1.06
CXCL12-202ENST00000374426 APOMO95445 188 aa8.44□□□□□ -1.06
CXCL12-202ENST00000374426 MALP21145 153 aa8.44□□□□□ -1.06
CXCL12-202ENST00000374426 C9orf116Q5BN46 136 aaPredicted RBP8.44□□□□□ -1.06
CXCL12-202ENST00000374426 CT83Q5H943 113 aa8.44□□□□□ -1.06
CXCL12-202ENST00000374426 TMEM191AQ9H0A3 160 aa8.44□□□□□ -1.06
CXCL12-202ENST00000374426 C1orf196B1AJZ1 125 aa8.43□□□□□ -1.06
CXCL12-202ENST00000374426 TMEM250H0YL14 139 aa8.43□□□□□ -1.06
CXCL12-202ENST00000374426 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.43□□□□□ -1.06
CXCL12-202ENST00000374426 RAB4AP20338 218 aa8.43□□□□□ -1.06
CXCL12-202ENST00000374426 SLC51BQ86UW2 128 aa8.43□□□□□ -1.06
CXCL12-202ENST00000374426 CAMK2N2Q96S95 79 aa8.43□□□□□ -1.06
CXCL12-202ENST00000374426 A0A1B0GUT8 65 aa8.42□□□□□ -1.06
CXCL12-202ENST00000374426 MT-ND6P03923 174 aa8.42□□□□□ -1.06
CXCL12-202ENST00000374426 RNASE13Q5GAN3 156 aaKnown RBP8.42□□□□□ -1.06
CXCL12-202ENST00000374426 AMN1Q8IY45 258 aa8.42□□□□□ -1.06
CXCL12-202ENST00000374426 BORCS7Q96B45 105 aa8.42□□□□□ -1.06
CXCL12-202ENST00000374426 CSDC2Q9Y534 153 aaKnown RBP8.42□□□□□ -1.06
CXCL12-202ENST00000374426 MUC2Q02817 5179 aa8.42□□□□□ -1.06
CXCL12-202ENST00000374426 HIGD1CA8MV81 97 aa8.41□□□□□ -1.06
CXCL12-202ENST00000374426 PHF5AQ7RTV0 110 aaKnown RBP8.41□□□□□ -1.06
CXCL12-202ENST00000374426 C2orf48Q96LS8 159 aa8.41□□□□□ -1.06
CXCL12-202ENST00000374426 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
CXCL12-202ENST00000374426 TRAV13-1A0A0B4J241 112 aa8.4□□□□□ -1.06
CXCL12-202ENST00000374426 SMKR1H3BMG3 65 aa8.4□□□□□ -1.06
CXCL12-202ENST00000374426 VCYO14598 125 aa8.4□□□□□ -1.06
CXCL12-202ENST00000374426 FCER1GP30273 86 aa8.4□□□□□ -1.06
CXCL12-202ENST00000374426 RPL18AQ02543 176 aaKnown RBP8.4□□□□□ -1.06
CXCL12-202ENST00000374426 C1orf137Q5JT78 98 aa8.4□□□□□ -1.06
CXCL12-202ENST00000374426 C5orf38Q86SI9 138 aa8.4□□□□□ -1.06
CXCL12-202ENST00000374426 TSKUQ8WUA8 353 aa8.4□□□□□ -1.06
CXCL12-202ENST00000374426 OPRPNQ99935 248 aaPredicted RBP8.4□□□□□ -1.06
CXCL12-202ENST00000374426 CEBPGP53567 150 aa8.39□□□□□ -1.07
CXCL12-202ENST00000374426 Q6ZUT4 128 aa8.39□□□□□ -1.07
CXCL12-202ENST00000374426 TCTE3Q8IZS6 198 aa8.39□□□□□ -1.07
CXCL12-202ENST00000374426 NRACQ8N912 160 aa8.39□□□□□ -1.07
CXCL12-202ENST00000374426 SUMO2P61956 95 aaKnown RBP8.38□□□□□ -1.07
CXCL12-202ENST00000374426 SPAG11BQ08648 103 aa8.38□□□□□ -1.07
CXCL12-202ENST00000374426 LINC01551Q86U37 167 aa8.38□□□□□ -1.07
CXCL12-202ENST00000374426 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
CXCL12-202ENST00000374426 SMAGPQ0VAQ4 97 aa8.37□□□□□ -1.07
CXCL12-202ENST00000374426 RNF151Q2KHN1 245 aa8.37□□□□□ -1.07
CXCL12-202ENST00000374426 KIR2DL4Q99706 377 aa8.37□□□□□ -1.07
CXCL12-202ENST00000374426 IGLV7-43P04211 117 aa8.36□□□□□ -1.07
CXCL12-202ENST00000374426 KRTAP11-1Q8IUC1 163 aa8.36□□□□□ -1.07
CXCL12-202ENST00000374426 DIRC1Q969H9 104 aa8.36□□□□□ -1.07
CXCL12-202ENST00000374426 SMIM7Q9BQ49 75 aa8.36□□□□□ -1.07
CXCL12-202ENST00000374426 TIMM21Q9BVV7 248 aa8.36□□□□□ -1.07
CXCL12-202ENST00000374426 OSTCQ9NRP0 149 aa8.36□□□□□ -1.07
CXCL12-202ENST00000374426 FAM168BA1KXE4 195 aa8.35□□□□□ -1.07
CXCL12-202ENST00000374426 PPP1R17O96001 155 aa8.35□□□□□ -1.07
CXCL12-202ENST00000374426 BLOC1S1P78537 153 aa8.35□□□□□ -1.07
CXCL12-202ENST00000374426 ALKAL2Q6UX46 152 aa8.35□□□□□ -1.07
CXCL12-202ENST00000374426 OR10D4PQ8NGN7 298 aa8.35□□□□□ -1.07
CXCL12-202ENST00000374426 FAM104AQ969W3 186 aa8.35□□□□□ -1.07
CXCL12-202ENST00000374426 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
CXCL12-202ENST00000374426 A0A087WZ39 114 aa8.34□□□□□ -1.07
CXCL12-202ENST00000374426 RIGQ13278 110 aa8.34□□□□□ -1.07
CXCL12-202ENST00000374426 V9GYV3 84 aa8.34□□□□□ -1.07
CXCL12-202ENST00000374426 IGHV3OR16-9A0A0B4J2B5 98 aa8.33□□□□□ -1.08
CXCL12-202ENST00000374426 H0Y9J4 135 aa8.33□□□□□ -1.08
CXCL12-202ENST00000374426 PPP1R2P9O14990 202 aa8.33□□□□□ -1.08
CXCL12-202ENST00000374426 C10orf25Q5T742 122 aa8.33□□□□□ -1.08
CXCL12-202ENST00000374426 ORAOV1Q8WV07 137 aa8.33□□□□□ -1.08
CXCL12-202ENST00000374426 TMEM18Q96B42 140 aa8.33□□□□□ -1.08
CXCL12-202ENST00000374426 IMMP2LQ96T52 175 aa8.33□□□□□ -1.08
CXCL12-202ENST00000374426 ZNF727A8MUV8 499 aa8.32□□□□□ -1.08
CXCL12-202ENST00000374426 RPL39P62891 51 aaKnown RBP8.32□□□□□ -1.08
CXCL12-202ENST00000374426 MRPL51Q4U2R6 128 aaKnown RBP8.32□□□□□ -1.08
CXCL12-202ENST00000374426 FAM104BQ5XKR9 115 aa8.32□□□□□ -1.08
CXCL12-202ENST00000374426 F8WDY8 70 aa8.31□□□□□ -1.08
CXCL12-202ENST00000374426 NDUFA1O15239 70 aa8.31□□□□□ -1.08
CXCL12-202ENST00000374426 KRTAP1-4P0C5Y4 121 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 211.4 ms