RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 LEPROTO15243 131 aa12.71□□□□□ -0.37
CTSA-204ENST00000372484 NBEAL2Q6ZNJ1 2754 aa12.71□□□□□ -0.38
CTSA-204ENST00000372484 NTM-AS1Q6ZSK4 140 aa12.71□□□□□ -0.38
CTSA-204ENST00000372484 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
CTSA-204ENST00000372484 TIMM21Q9BVV7 248 aa12.7□□□□□ -0.38
CTSA-204ENST00000372484 A0A0J9YY99 117 aa12.69□□□□□ -0.38
CTSA-204ENST00000372484 TINCRA0A1B0GVN0 87 aa12.69□□□□□ -0.38
CTSA-204ENST00000372484 LOC100131303A0A0U1RQF7 123 aa12.68□□□□□ -0.38
CTSA-204ENST00000372484 LINC00694P0DN24 101 aa12.68□□□□□ -0.38
CTSA-204ENST00000372484 DEFB130BP0DP73 79 aa12.68□□□□□ -0.38
CTSA-204ENST00000372484 DEFB130AP0DP74 79 aa12.68□□□□□ -0.38
CTSA-204ENST00000372484 FHL2Q14192 279 aa12.68□□□□□ -0.38
CTSA-204ENST00000372484 X6R8D5 127 aa12.68□□□□□ -0.38
CTSA-204ENST00000372484 KIR2DL5BQ8NHK3 375 aa12.67□□□□□ -0.38
CTSA-204ENST00000372484 SMIM9A6NGZ8 99 aa12.67□□□□□ -0.38
CTSA-204ENST00000372484 UBE2D1P51668 147 aa12.67□□□□□ -0.38
CTSA-204ENST00000372484 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
CTSA-204ENST00000372484 GTSF1LQ9H1H1 148 aa12.67□□□□□ -0.38
CTSA-204ENST00000372484 GEMIN7Q9H840 131 aaKnown RBP12.67□□□□□ -0.38
CTSA-204ENST00000372484 A0A1W2PPM0 123 aa12.66□□□□□ -0.38
CTSA-204ENST00000372484 GAGE10A6NGK3 116 aa12.66□□□□□ -0.38
CTSA-204ENST00000372484 IGHV3-30-3P0DP02 117 aa12.65□□□□□ -0.38
CTSA-204ENST00000372484 SAMD5Q5TGI4 173 aa12.65□□□□□ -0.38
CTSA-204ENST00000372484 SBSPONQ8IVN8 264 aa12.65□□□□□ -0.38
CTSA-204ENST00000372484 CSDC2Q9Y534 153 aaKnown RBP12.65□□□□□ -0.38
CTSA-204ENST00000372484 TRAV8-3A0A0A6YYJ7 113 aa12.65□□□□□ -0.38
CTSA-204ENST00000372484 WFDC9Q8NEX5 89 aa12.65□□□□□ -0.38
CTSA-204ENST00000372484 TMEM243Q9BU79 118 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 TRRAPQ9Y4A5 3859 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 TMEM238LA0A1B0GVL6 79 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 A6NJY4 79 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 UBE2L6O14933 153 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 APOC4P55056 127 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 SMAGPQ0VAQ4 97 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 DEFB135Q30KP9 77 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 GTF2H5Q6ZYL4 71 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 LINC00612Q8N6U2 182 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 OR5A1Q8NGJ0 315 aa12.64□□□□□ -0.39
CTSA-204ENST00000372484 SPANXB1Q9NS25 103 aaPredicted RBP12.64□□□□□ -0.39
CTSA-204ENST00000372484 IGHV1-58A0A0C4DH39 117 aa12.63□□□□□ -0.39
CTSA-204ENST00000372484 FABP2P12104 132 aa12.63□□□□□ -0.39
CTSA-204ENST00000372484 A0A1B0GWB2 263 aa12.62□□□□□ -0.39
CTSA-204ENST00000372484 SPINK8P0C7L1 97 aa12.62□□□□□ -0.39
CTSA-204ENST00000372484 K7EP34 96 aa12.61□□□□□ -0.39
CTSA-204ENST00000372484 TIRAPP58753 221 aa12.61□□□□□ -0.39
CTSA-204ENST00000372484 VSIG2Q96IQ7 327 aa12.61□□□□□ -0.39
CTSA-204ENST00000372484 CDKN2A-AS1Q9UH64 79 aa12.61□□□□□ -0.39
CTSA-204ENST00000372484 CDC42SE2Q9NRR3 84 aa12.61□□□□□ -0.39
CTSA-204ENST00000372484 SPCS1Q9Y6A9 102 aa12.61□□□□□ -0.39
CTSA-204ENST00000372484 IGLL5B9A064 214 aa12.6□□□□□ -0.39
CTSA-204ENST00000372484 IGHV3-30P01768 117 aa12.6□□□□□ -0.39
CTSA-204ENST00000372484 IGHV3-30-5P0DP03 117 aa12.6□□□□□ -0.39
CTSA-204ENST00000372484 C10orf126Q8N4M7 172 aa12.6□□□□□ -0.39
CTSA-204ENST00000372484 TMEM101Q96IK0 257 aa12.6□□□□□ -0.39
CTSA-204ENST00000372484 IGLV5-45A0A087WSX0 123 aa12.59□□□□□ -0.39
CTSA-204ENST00000372484 WIPF1O43516 503 aa12.59□□□□□ -0.39
CTSA-204ENST00000372484 FAM222AQ5U5X8 452 aa12.59□□□□□ -0.39
CTSA-204ENST00000372484 TRAV13-1A0A0B4J241 112 aa12.59□□□□□ -0.39
CTSA-204ENST00000372484 HERVK_113P63121 156 aa12.59□□□□□ -0.39
CTSA-204ENST00000372484 COX6A2Q02221 97 aa12.59□□□□□ -0.39
CTSA-204ENST00000372484 LINC00242Q5T6M2 205 aa12.59□□□□□ -0.39
CTSA-204ENST00000372484 H7C423 109 aa12.58□□□□□ -0.4
CTSA-204ENST00000372484 TRBV6-8A0A0A6YYG3 113 aa12.58□□□□□ -0.4
CTSA-204ENST00000372484 A0A0J9YXY3 114 aa12.58□□□□□ -0.4
CTSA-204ENST00000372484 LYRM9A8MSI8 78 aa12.58□□□□□ -0.4
CTSA-204ENST00000372484 A8MZ25 164 aa12.58□□□□□ -0.4
CTSA-204ENST00000372484 NDUFA12Q9UI09 145 aa12.58□□□□□ -0.4
CTSA-204ENST00000372484 DEFB4AO15263 64 aa12.57□□□□□ -0.4
CTSA-204ENST00000372484 TMEM238C9JI98 176 aa12.56□□□□□ -0.4
CTSA-204ENST00000372484 FAM19A3Q7Z5A8 133 aa12.56□□□□□ -0.4
CTSA-204ENST00000372484 GYPEP15421 78 aa12.56□□□□□ -0.4
CTSA-204ENST00000372484 GAGE6Q13070 117 aa12.56□□□□□ -0.4
CTSA-204ENST00000372484 IGHV4-28A0A0C4DH34 117 aa12.55□□□□□ -0.4
CTSA-204ENST00000372484 APOMO95445 188 aa12.55□□□□□ -0.4
CTSA-204ENST00000372484 IGHV4-30-4P0DP06 118 aa12.55□□□□□ -0.4
CTSA-204ENST00000372484 CHCHD5Q9BSY4 110 aa12.55□□□□□ -0.4
CTSA-204ENST00000372484 PRO0255Q9UI72 69 aa12.55□□□□□ -0.4
CTSA-204ENST00000372484 KRTAP24-1Q3LI83 254 aa12.55□□□□□ -0.4
CTSA-204ENST00000372484 ZFAND6Q6FIF0 208 aa12.54□□□□□ -0.4
CTSA-204ENST00000372484 ATP6V0E2Q8NHE4 81 aa12.54□□□□□ -0.4
CTSA-204ENST00000372484 PGPEP1Q9NXJ5 209 aa12.54□□□□□ -0.4
CTSA-204ENST00000372484 CFC1BP0CG36 223 aa12.52□□□□□ -0.41
CTSA-204ENST00000372484 CFC1P0CG37 223 aa12.52□□□□□ -0.41
CTSA-204ENST00000372484 MIFP14174 115 aa12.52□□□□□ -0.41
CTSA-204ENST00000372484 MUSTN1Q8IVN3 82 aa12.52□□□□□ -0.41
CTSA-204ENST00000372484 IGLV5-39A0A0G2JS06 123 aa12.51□□□□□ -0.41
CTSA-204ENST00000372484 DAD1P61803 113 aa12.51□□□□□ -0.41
CTSA-204ENST00000372484 RPL24P83731 157 aaKnown RBP12.51□□□□□ -0.41
CTSA-204ENST00000372484 OXLD1Q5BKU9 147 aa12.51□□□□□ -0.41
CTSA-204ENST00000372484 Q8NAQ8 132 aa12.51□□□□□ -0.41
CTSA-204ENST00000372484 LITAFQ99732 161 aa12.51□□□□□ -0.41
CTSA-204ENST00000372484 IGLV4-60A0A075B6I1 120 aa12.5□□□□□ -0.41
CTSA-204ENST00000372484 A4D1N5 150 aa12.5□□□□□ -0.41
CTSA-204ENST00000372484 PAX4O43316 350 aa12.5□□□□□ -0.41
CTSA-204ENST00000372484 RNF183Q96D59 192 aa12.5□□□□□ -0.41
CTSA-204ENST00000372484 STAB1Q9NY15 2570 aa12.5□□□□□ -0.41
CTSA-204ENST00000372484 SMIM1B2RUZ4 78 aa12.5□□□□□ -0.41
CTSA-204ENST00000372484 FBN1P35555 2871 aaKnown RBP12.5□□□□□ -0.41
CTSA-204ENST00000372484 C3orf56Q8N813 242 aa12.49□□□□□ -0.41
CTSA-204ENST00000372484 IGKV3OR2-268A0A0C4DH90 116 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms