RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
LMNA-205ENST00000368299 MRPS36P82909 103 aaKnown RBP12.48□□□□□ -0.41
LMNA-205ENST00000368299 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.48□□□□□ -0.41
LMNA-205ENST00000368299 PGPEP1Q9NXJ5 209 aa12.48□□□□□ -0.41
LMNA-205ENST00000368299 PRO0461Q9UI25 63 aa12.48□□□□□ -0.41
LMNA-205ENST00000368299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.47□□□□□ -0.41
LMNA-205ENST00000368299 A0A0J9YXV3 536 aa12.47□□□□□ -0.41
LMNA-205ENST00000368299 A0A0J9YY99 117 aa12.47□□□□□ -0.41
LMNA-205ENST00000368299 IGKV2-29A2NJV5 120 aaPredicted RBP12.47□□□□□ -0.41
LMNA-205ENST00000368299 ZNF22P17026 224 aaPredicted RBP12.47□□□□□ -0.41
LMNA-205ENST00000368299 GAGE13Q4V321 117 aa12.47□□□□□ -0.41
LMNA-205ENST00000368299 HIVEP1P15822 2718 aa12.47□□□□□ -0.41
LMNA-205ENST00000368299 CEMP1Q6PRD7 247 aaPredicted RBP12.46□□□□□ -0.41
LMNA-205ENST00000368299 TRBV6-4A0A1B0GX49 114 aa12.46□□□□□ -0.42
LMNA-205ENST00000368299 J3QQQ9 107 aa12.46□□□□□ -0.42
LMNA-205ENST00000368299 UBE2D3P61077 147 aa12.46□□□□□ -0.42
LMNA-205ENST00000368299 UBE2D2P62837 147 aa12.46□□□□□ -0.42
LMNA-205ENST00000368299 J3QR89 54 aa12.45□□□□□ -0.42
LMNA-205ENST00000368299 LEPROTO15243 131 aa12.45□□□□□ -0.42
LMNA-205ENST00000368299 LGALS3P17931 250 aaKnown RBP12.45□□□□□ -0.42
LMNA-205ENST00000368299 SMAGPQ0VAQ4 97 aa12.45□□□□□ -0.42
LMNA-205ENST00000368299 ETDBQ3ZM63 59 aa12.44□□□□□ -0.42
LMNA-205ENST00000368299 TINCRA0A1B0GVN0 87 aa12.44□□□□□ -0.42
LMNA-205ENST00000368299 SMIM9A6NGZ8 99 aa12.44□□□□□ -0.42
LMNA-205ENST00000368299 TSPEAR-AS2P59090 65 aa12.44□□□□□ -0.42
LMNA-205ENST00000368299 DGAT2L7PQ6IED9 249 aa12.44□□□□□ -0.42
LMNA-205ENST00000368299 CFAP161Q6P656 301 aa12.43□□□□□ -0.42
LMNA-205ENST00000368299 KIR2DL5BQ8NHK3 375 aa12.43□□□□□ -0.42
LMNA-205ENST00000368299 TRGV4A0A0C4DH28 118 aa12.42□□□□□ -0.42
LMNA-205ENST00000368299 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
LMNA-205ENST00000368299 GAGE4Q13068 117 aa12.42□□□□□ -0.42
LMNA-205ENST00000368299 GAGE5Q13069 117 aa12.42□□□□□ -0.42
LMNA-205ENST00000368299 Q6ZUT4 128 aa12.42□□□□□ -0.42
LMNA-205ENST00000368299 SH2D6Q7Z4S9 175 aa12.42□□□□□ -0.42
LMNA-205ENST00000368299 GTSF1LQ9H1H1 148 aa12.42□□□□□ -0.42
LMNA-205ENST00000368299 CSDC2Q9Y534 153 aaKnown RBP12.42□□□□□ -0.42
LMNA-205ENST00000368299 NOTCH3Q9UM47 2321 aa12.42□□□□□ -0.42
LMNA-205ENST00000368299 TSPAN13O95857 204 aa12.42□□□□□ -0.42
LMNA-205ENST00000368299 SPATA3Q8NHX4 192 aa12.42□□□□□ -0.42
LMNA-205ENST00000368299 IGHV3-30P01768 117 aa12.41□□□□□ -0.42
LMNA-205ENST00000368299 IGHV3-30-5P0DP03 117 aa12.41□□□□□ -0.42
LMNA-205ENST00000368299 RNASE13Q5GAN3 156 aaKnown RBP12.41□□□□□ -0.42
LMNA-205ENST00000368299 MTURNQ8N3F0 131 aa12.41□□□□□ -0.42
LMNA-205ENST00000368299 NTM-AS1Q6ZSK4 140 aa12.4□□□□□ -0.42
LMNA-205ENST00000368299 LINC00612Q8N6U2 182 aa12.4□□□□□ -0.42
LMNA-205ENST00000368299 WFDC9Q8NEX5 89 aa12.4□□□□□ -0.42
LMNA-205ENST00000368299 TMEM238C9JI98 176 aa12.39□□□□□ -0.43
LMNA-205ENST00000368299 APOMO95445 188 aa12.39□□□□□ -0.43
LMNA-205ENST00000368299 FHL2Q14192 279 aa12.39□□□□□ -0.43
LMNA-205ENST00000368299 LYRM7Q5U5X0 104 aa12.39□□□□□ -0.43
LMNA-205ENST00000368299 APOC4P55056 127 aa12.39□□□□□ -0.43
LMNA-205ENST00000368299 SBSPONQ8IVN8 264 aa12.39□□□□□ -0.43
LMNA-205ENST00000368299 GEMIN7Q9H840 131 aaKnown RBP12.39□□□□□ -0.43
LMNA-205ENST00000368299 X6R8D5 127 aa12.39□□□□□ -0.43
LMNA-205ENST00000368299 GAGE12HA6NDE8 117 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 H7C423 109 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 TIRAPP58753 221 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 SPATA25Q9BR10 227 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 IGHV1-58A0A0C4DH39 117 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 LOC107984156A0A0G2JMH3 177 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 WIPF1O43516 503 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 CFC1BP0CG36 223 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 CFC1P0CG37 223 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 ARL17AQ8IVW1 177 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 TMEM243Q9BU79 118 aa12.37□□□□□ -0.43
LMNA-205ENST00000368299 LINC00694P0DN24 101 aa12.36□□□□□ -0.43
LMNA-205ENST00000368299 SIGMAR1Q99720 223 aa12.36□□□□□ -0.43
LMNA-205ENST00000368299 IGHV3-64A0A075B6Q5 118 aa12.36□□□□□ -0.43
LMNA-205ENST00000368299 UBE2L6O14933 153 aa12.36□□□□□ -0.43
LMNA-205ENST00000368299 C10orf126Q8N4M7 172 aa12.36□□□□□ -0.43
LMNA-205ENST00000368299 ATP6V0E2Q8NHE4 81 aa12.36□□□□□ -0.43
LMNA-205ENST00000368299 IGLV5-45A0A087WSX0 123 aa12.35□□□□□ -0.43
LMNA-205ENST00000368299 DEFB130BP0DP73 79 aa12.35□□□□□ -0.43
LMNA-205ENST00000368299 DEFB130AP0DP74 79 aa12.35□□□□□ -0.43
LMNA-205ENST00000368299 SMCPP49901 116 aaPredicted RBP12.35□□□□□ -0.43
LMNA-205ENST00000368299 FAM19A3Q7Z5A8 133 aa12.35□□□□□ -0.43
LMNA-205ENST00000368299 PSMB2P49721 201 aa12.35□□□□□ -0.43
LMNA-205ENST00000368299 HERVK_113P63121 156 aa12.35□□□□□ -0.43
LMNA-205ENST00000368299 LOC100131303A0A0U1RQF7 123 aa12.34□□□□□ -0.43
LMNA-205ENST00000368299 SCGB1A1P11684 91 aa12.34□□□□□ -0.43
LMNA-205ENST00000368299 TMEM101Q96IK0 257 aa12.34□□□□□ -0.43
LMNA-205ENST00000368299 VSIG2Q96IQ7 327 aa12.34□□□□□ -0.43
LMNA-205ENST00000368299 TRBV20-1A0A075B6N2 111 aa12.34□□□□□ -0.43
LMNA-205ENST00000368299 LYRM9A8MSI8 78 aa12.34□□□□□ -0.43
LMNA-205ENST00000368299 SFTA2Q6UW10 78 aa12.34□□□□□ -0.43
LMNA-205ENST00000368299 CDC42SE2Q9NRR3 84 aa12.33□□□□□ -0.44
LMNA-205ENST00000368299 PRO1854Q9UHT4 67 aa12.33□□□□□ -0.44
LMNA-205ENST00000368299 TRAV8-3A0A0A6YYJ7 113 aa12.32□□□□□ -0.44
LMNA-205ENST00000368299 FOXI1Q12951 378 aa12.32□□□□□ -0.44
LMNA-205ENST00000368299 VWFP04275 2813 aa12.32□□□□□ -0.44
LMNA-205ENST00000368299 CDKN2A-AS1Q9UH64 79 aa12.31□□□□□ -0.44
LMNA-205ENST00000368299 TENM1Q9UKZ4 2725 aa12.31□□□□□ -0.44
LMNA-205ENST00000368299 TCL1BO95988 128 aa12.31□□□□□ -0.44
LMNA-205ENST00000368299 DEFB135Q30KP9 77 aa12.31□□□□□ -0.44
LMNA-205ENST00000368299 LINC00242Q5T6M2 205 aa12.31□□□□□ -0.44
LMNA-205ENST00000368299 TEP1Q99973 2627 aaKnown RBP12.3□□□□□ -0.44
LMNA-205ENST00000368299 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
LMNA-205ENST00000368299 SPINK8P0C7L1 97 aa12.3□□□□□ -0.44
LMNA-205ENST00000368299 A0A0J9YXY3 114 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms