RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ATP6V0E2Q8NHE4 81 aa6.21□□□□□ -1.42
PTPRK-206ENST00000368215 MUC3AQ02505 3323 aa6.21□□□□□ -1.42
PTPRK-206ENST00000368215 TMEM223A0PJW6 202 aa6.21□□□□□ -1.42
PTPRK-206ENST00000368215 IGIPA6NJ69 53 aa6.2□□□□□ -1.42
PTPRK-206ENST00000368215 C3orf56Q8N813 242 aa6.2□□□□□ -1.42
PTPRK-206ENST00000368215 TCL1BO95988 128 aa6.2□□□□□ -1.42
PTPRK-206ENST00000368215 APOC4P55056 127 aa6.2□□□□□ -1.42
PTPRK-206ENST00000368215 G3V4G9 280 aa6.2□□□□□ -1.42
PTPRK-206ENST00000368215 CLEC2BQ92478 149 aa6.2□□□□□ -1.42
PTPRK-206ENST00000368215 TRAV4A0A0B4J268 109 aa6.2□□□□□ -1.42
PTPRK-206ENST00000368215 RBX1P62877 108 aa6.2□□□□□ -1.42
PTPRK-206ENST00000368215 ICOSQ9Y6W8 199 aa6.2□□□□□ -1.42
PTPRK-206ENST00000368215 ODF3L2Q3SX64 289 aa6.19□□□□□ -1.42
PTPRK-206ENST00000368215 GAGE2AQ6NT46 116 aa6.19□□□□□ -1.42
PTPRK-206ENST00000368215 SMR3AQ99954 134 aa6.19□□□□□ -1.42
PTPRK-206ENST00000368215 DEFB121Q5J5C9 76 aa6.19□□□□□ -1.42
PTPRK-206ENST00000368215 KALRNO60229 2985 aa6.19□□□□□ -1.42
PTPRK-206ENST00000368215 BRI3O95415 125 aa6.19□□□□□ -1.42
PTPRK-206ENST00000368215 RPL32P62910 135 aaKnown RBP6.19□□□□□ -1.42
PTPRK-206ENST00000368215 LINC01620Q4KN68 170 aa6.19□□□□□ -1.42
PTPRK-206ENST00000368215 ANKRD29Q8N6D5 301 aa6.19□□□□□ -1.42
PTPRK-206ENST00000368215 HECTD1Q9ULT8 2610 aa6.19□□□□□ -1.42
PTPRK-206ENST00000368215 TRBV10-1A0A0K0K1A3 114 aa6.19□□□□□ -1.42
PTPRK-206ENST00000368215 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
PTPRK-206ENST00000368215 TEN1Q86WV5 123 aa6.18□□□□□ -1.42
PTPRK-206ENST00000368215 LINC00482Q8N8I6 264 aa6.18□□□□□ -1.42
PTPRK-206ENST00000368215 LOC100131303A0A0U1RQF7 123 aa6.18□□□□□ -1.42
PTPRK-206ENST00000368215 IFITM1P13164 125 aa6.18□□□□□ -1.42
PTPRK-206ENST00000368215 C9orf66Q5T8R8 295 aa6.18□□□□□ -1.42
PTPRK-206ENST00000368215 FOXI1Q12951 378 aa6.18□□□□□ -1.42
PTPRK-206ENST00000368215 IGLV4-69A0A075B6H9 119 aa6.17□□□□□ -1.42
PTPRK-206ENST00000368215 INAFM1C9JVW0 142 aa6.17□□□□□ -1.42
PTPRK-206ENST00000368215 COX7B2Q8TF08 81 aa6.17□□□□□ -1.42
PTPRK-206ENST00000368215 TSPEAR-AS2P59090 65 aa6.17□□□□□ -1.42
PTPRK-206ENST00000368215 SND1-IT1Q9HBX3 110 aa6.17□□□□□ -1.42
PTPRK-206ENST00000368215 ZNF580Q9UK33 172 aa6.17□□□□□ -1.42
PTPRK-206ENST00000368215 RS1O15537 224 aa6.17□□□□□ -1.42
PTPRK-206ENST00000368215 IGHV3-30P01768 117 aa6.17□□□□□ -1.42
PTPRK-206ENST00000368215 IGHV3-30-5P0DP03 117 aa6.17□□□□□ -1.42
PTPRK-206ENST00000368215 TRAV13-2A0A0B4J235 113 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 HERV-K104P63124 156 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 MIR7-3HGQ8N6C7 128 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 KIF25-AS1Q9Y6Z4 181 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 ZZEF1O43149 2961 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 FLNBO75369 2602 aaKnown RBP6.16□□□□□ -1.42
PTPRK-206ENST00000368215 NDUFA7O95182 113 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 MIAQ16674 131 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 LRBAP50851 2863 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 TACC2O95359 2948 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 Q6ZSN1 163 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 UBE2D4Q9Y2X8 147 aa6.16□□□□□ -1.42
PTPRK-206ENST00000368215 SPANXB1Q9NS25 103 aaPredicted RBP6.16□□□□□ -1.42
PTPRK-206ENST00000368215 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.42
PTPRK-206ENST00000368215 LAMTOR3Q9UHA4 124 aa6.15□□□□□ -1.42
PTPRK-206ENST00000368215 PYGO1Q9Y3Y4 419 aa6.15□□□□□ -1.42
PTPRK-206ENST00000368215 DMDP11532 3685 aa6.15□□□□□ -1.42
PTPRK-206ENST00000368215 ATP5G1P05496 136 aa6.15□□□□□ -1.43
PTPRK-206ENST00000368215 BAALC-AS2P0C853 105 aa6.15□□□□□ -1.43
PTPRK-206ENST00000368215 LINC00315P59091 139 aa6.15□□□□□ -1.43
PTPRK-206ENST00000368215 FAM222AQ5U5X8 452 aa6.15□□□□□ -1.43
PTPRK-206ENST00000368215 ZNF561-AS1K7EIQ3 104 aa6.14□□□□□ -1.43
PTPRK-206ENST00000368215 IGHV3-33P01772 117 aa6.14□□□□□ -1.43
PTPRK-206ENST00000368215 C15orf53Q8NAA6 179 aa6.14□□□□□ -1.43
PTPRK-206ENST00000368215 FLNAP21333 2647 aaKnown RBP6.14□□□□□ -1.43
PTPRK-206ENST00000368215 UFSP1Q6NVU6 142 aa6.14□□□□□ -1.43
PTPRK-206ENST00000368215 PRO0255Q9UI72 69 aa6.14□□□□□ -1.43
PTPRK-206ENST00000368215 INSL3P51460 131 aa6.14□□□□□ -1.43
PTPRK-206ENST00000368215 PIK3CD-AS1Q5SR53 167 aa6.14□□□□□ -1.43
PTPRK-206ENST00000368215 C1orf158Q8N1D5 194 aa6.14□□□□□ -1.43
PTPRK-206ENST00000368215 DPH3Q96FX2 82 aa6.14□□□□□ -1.43
PTPRK-206ENST00000368215 CFAP46Q8IYW2 2715 aa6.14□□□□□ -1.43
PTPRK-206ENST00000368215 A0A0B4J2C4 111 aa6.13□□□□□ -1.43
PTPRK-206ENST00000368215 SPART-AS1P0CW21 52 aa6.13□□□□□ -1.43
PTPRK-206ENST00000368215 FAM19A4Q96LR4 140 aa6.13□□□□□ -1.43
PTPRK-206ENST00000368215 LY6G6DO95868 133 aa6.13□□□□□ -1.43
PTPRK-206ENST00000368215 Q9UF83 564 aa6.13□□□□□ -1.43
PTPRK-206ENST00000368215 TRIAP1O43715 76 aa6.13□□□□□ -1.43
PTPRK-206ENST00000368215 OVOL2Q9BRP0 275 aa6.13□□□□□ -1.43
PTPRK-206ENST00000368215 COL12A1Q99715 3063 aa6.13□□□□□ -1.43
PTPRK-206ENST00000368215 COX7A2LO14548 114 aa6.13□□□□□ -1.43
PTPRK-206ENST00000368215 PLA2G2AP14555 144 aa6.13□□□□□ -1.43
PTPRK-206ENST00000368215 HIST1H4AP62805 103 aaKnown RBP6.13□□□□□ -1.43
PTPRK-206ENST00000368215 CRYBA4P53673 196 aa6.12□□□□□ -1.43
PTPRK-206ENST00000368215 MRPL23Q16540 153 aaKnown RBP6.12□□□□□ -1.43
PTPRK-206ENST00000368215 EDA2RQ9HAV5 297 aa6.12□□□□□ -1.43
PTPRK-206ENST00000368215 TRAV26-1A0A087WT03 109 aa6.12□□□□□ -1.43
PTPRK-206ENST00000368215 TRBV10-2A0A0K0K1G8 114 aa6.12□□□□□ -1.43
PTPRK-206ENST00000368215 LINC00694P0DN24 101 aa6.12□□□□□ -1.43
PTPRK-206ENST00000368215 POM121L12Q8N7R1 296 aa6.12□□□□□ -1.43
PTPRK-206ENST00000368215 KLK12Q9UKR0 248 aa6.12□□□□□ -1.43
PTPRK-206ENST00000368215 MRPS36P82909 103 aaKnown RBP6.12□□□□□ -1.43
PTPRK-206ENST00000368215 MRAPQ8TCY5 172 aa6.12□□□□□ -1.43
PTPRK-206ENST00000368215 CHCHD7Q9BUK0 85 aa6.12□□□□□ -1.43
PTPRK-206ENST00000368215 INAFM2P0DMQ5 153 aa6.11□□□□□ -1.43
PTPRK-206ENST00000368215 UBE2D1P51668 147 aa6.11□□□□□ -1.43
PTPRK-206ENST00000368215 HILS1P60008 231 aa6.11□□□□□ -1.43
PTPRK-206ENST00000368215 LINC00308Q8TCZ7 52 aa6.11□□□□□ -1.43
PTPRK-206ENST00000368215 Q9HAA7 133 aa6.11□□□□□ -1.43
PTPRK-206ENST00000368215 MUC4Q99102 2169 aa6.11□□□□□ -1.43
PTPRK-206ENST00000368215 TRBV6-8A0A0A6YYG3 113 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms