RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-202ENST00000366159 IGKV3OR2-268A0A0C4DH90 116 aa8.69□□□□□ -1.02
TNFRSF1A-202ENST00000366159 FOXI1Q12951 378 aa8.69□□□□□ -1.02
TNFRSF1A-202ENST00000366159 TMEM241Q24JQ0 296 aa8.69□□□□□ -1.02
TNFRSF1A-202ENST00000366159 FAM74A3Q4VXF1 159 aa8.69□□□□□ -1.02
TNFRSF1A-202ENST00000366159 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
TNFRSF1A-202ENST00000366159 TMEM242Q9NWH2 141 aa8.69□□□□□ -1.02
TNFRSF1A-202ENST00000366159 GVQW2A0A096LPI5 108 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-202ENST00000366159 SRSF3P84103 164 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-202ENST00000366159 NRACQ8N912 160 aa8.68□□□□□ -1.02
TNFRSF1A-202ENST00000366159 SPACA4Q8TDM5 124 aa8.68□□□□□ -1.02
TNFRSF1A-202ENST00000366159 CDC42SE2Q9NRR3 84 aa8.68□□□□□ -1.02
TNFRSF1A-202ENST00000366159 A0A087WYN8 130 aa8.67□□□□□ -1.02
TNFRSF1A-202ENST00000366159 LINC00959A0A1B0GUT2 108 aa8.67□□□□□ -1.02
TNFRSF1A-202ENST00000366159 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
TNFRSF1A-202ENST00000366159 RIGQ13278 110 aa8.67□□□□□ -1.02
TNFRSF1A-202ENST00000366159 SMIM27A0A1W2PRY6 76 aa8.66□□□□□ -1.02
TNFRSF1A-202ENST00000366159 SMKR1H3BMG3 65 aa8.66□□□□□ -1.02
TNFRSF1A-202ENST00000366159 HIGD2BQ4VC39 106 aa8.66□□□□□ -1.02
TNFRSF1A-202ENST00000366159 PLAC8Q9NZF1 115 aa8.66□□□□□ -1.02
TNFRSF1A-202ENST00000366159 NAT8BQ9UHF3 227 aa8.66□□□□□ -1.02
TNFRSF1A-202ENST00000366159 VCYO14598 125 aa8.65□□□□□ -1.02
TNFRSF1A-202ENST00000366159 TMEM101Q96IK0 257 aa8.65□□□□□ -1.02
TNFRSF1A-202ENST00000366159 BTF3L4Q96K17 158 aa8.65□□□□□ -1.02
TNFRSF1A-202ENST00000366159 SMDT1Q9H4I9 107 aa8.65□□□□□ -1.02
TNFRSF1A-202ENST00000366159 NAT8Q9UHE5 227 aa8.65□□□□□ -1.02
TNFRSF1A-202ENST00000366159 CSDC2Q9Y534 153 aaKnown RBP8.65□□□□□ -1.02
TNFRSF1A-202ENST00000366159 C7orf77A4D0Y5 90 aa8.64□□□□□ -1.03
TNFRSF1A-202ENST00000366159 CCL25O15444 150 aa8.64□□□□□ -1.03
TNFRSF1A-202ENST00000366159 PPP1R17O96001 155 aa8.64□□□□□ -1.03
TNFRSF1A-202ENST00000366159 XCL1P47992 114 aa8.64□□□□□ -1.03
TNFRSF1A-202ENST00000366159 SUMO2P61956 95 aaKnown RBP8.64□□□□□ -1.03
TNFRSF1A-202ENST00000366159 COX6A2Q02221 97 aa8.64□□□□□ -1.03
TNFRSF1A-202ENST00000366159 MRPL51Q4U2R6 128 aaKnown RBP8.64□□□□□ -1.03
TNFRSF1A-202ENST00000366159 FAM104BQ5XKR9 115 aa8.64□□□□□ -1.03
TNFRSF1A-202ENST00000366159 ZNF664Q8N3J9 261 aa8.64□□□□□ -1.03
TNFRSF1A-202ENST00000366159 PRSS3P2Q8NHM4 247 aa8.64□□□□□ -1.03
TNFRSF1A-202ENST00000366159 TRBV24-1A0A075B6N3 115 aa8.63□□□□□ -1.03
TNFRSF1A-202ENST00000366159 PEA15Q15121 130 aa8.63□□□□□ -1.03
TNFRSF1A-202ENST00000366159 ADIRFQ15847 76 aa8.63□□□□□ -1.03
TNFRSF1A-202ENST00000366159 LINC00862A6NCI5 91 aa8.62□□□□□ -1.03
TNFRSF1A-202ENST00000366159 CD164L2Q6UWJ8 174 aa8.62□□□□□ -1.03
TNFRSF1A-202ENST00000366159 UBE2D4Q9Y2X8 147 aa8.62□□□□□ -1.03
TNFRSF1A-202ENST00000366159 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
TNFRSF1A-202ENST00000366159 A0A1B0GW15 77 aa8.61□□□□□ -1.03
TNFRSF1A-202ENST00000366159 PPP1R2P9O14990 202 aa8.61□□□□□ -1.03
TNFRSF1A-202ENST00000366159 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
TNFRSF1A-202ENST00000366159 SS18Q15532 418 aa8.61□□□□□ -1.03
TNFRSF1A-202ENST00000366159 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
TNFRSF1A-202ENST00000366159 A0A1B0GXF2 115 aa8.6□□□□□ -1.03
TNFRSF1A-202ENST00000366159 Q6ZRU5 148 aa8.6□□□□□ -1.03
TNFRSF1A-202ENST00000366159 FAM104AQ969W3 186 aa8.6□□□□□ -1.03
TNFRSF1A-202ENST00000366159 DPH3Q96FX2 82 aa8.6□□□□□ -1.03
TNFRSF1A-202ENST00000366159 KIR2DL4Q99706 377 aa8.6□□□□□ -1.03
TNFRSF1A-202ENST00000366159 C20orf78Q9BR46 151 aa8.6□□□□□ -1.03
TNFRSF1A-202ENST00000366159 TIMM21Q9BVV7 248 aa8.6□□□□□ -1.03
TNFRSF1A-202ENST00000366159 TNXBP22105 4242 aa8.6□□□□□ -1.03
TNFRSF1A-202ENST00000366159 A0A096LNI7 61 aa8.59□□□□□ -1.03
TNFRSF1A-202ENST00000366159 C1orf196B1AJZ1 125 aa8.59□□□□□ -1.03
TNFRSF1A-202ENST00000366159 MT1HL1P0DM35 61 aa8.59□□□□□ -1.03
TNFRSF1A-202ENST00000366159 FCER1GP30273 86 aa8.59□□□□□ -1.03
TNFRSF1A-202ENST00000366159 CAMPP49913 170 aa8.59□□□□□ -1.03
TNFRSF1A-202ENST00000366159 SERTAD4-AS1Q5TG53 156 aa8.59□□□□□ -1.03
TNFRSF1A-202ENST00000366159 LINC00526Q96FQ7 95 aa8.59□□□□□ -1.03
TNFRSF1A-202ENST00000366159 UBR4Q5T4S7 5183 aa8.59□□□□□ -1.03
TNFRSF1A-202ENST00000366159 PHOX2AO14813 284 aa8.58□□□□□ -1.04
TNFRSF1A-202ENST00000366159 MAJINQ3KP22 176 aa8.58□□□□□ -1.04
TNFRSF1A-202ENST00000366159 IGKV2-24A0A0C4DH68 120 aa8.57□□□□□ -1.04
TNFRSF1A-202ENST00000366159 EIF4EBP3O60516 100 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF1A-202ENST00000366159 TNFRSF6BO95407 300 aa8.57□□□□□ -1.04
TNFRSF1A-202ENST00000366159 STPG4Q8N801 248 aa8.57□□□□□ -1.04
TNFRSF1A-202ENST00000366159 CKS2P33552 79 aa8.56□□□□□ -1.04
TNFRSF1A-202ENST00000366159 HBBP68871 147 aa8.56□□□□□ -1.04
TNFRSF1A-202ENST00000366159 SMAGPQ0VAQ4 97 aa8.56□□□□□ -1.04
TNFRSF1A-202ENST00000366159 RNASE13Q5GAN3 156 aaKnown RBP8.56□□□□□ -1.04
TNFRSF1A-202ENST00000366159 CARD19Q96LW7 228 aa8.56□□□□□ -1.04
TNFRSF1A-202ENST00000366159 TCAPO15273 167 aa8.55□□□□□ -1.04
TNFRSF1A-202ENST00000366159 SYCNQ0VAF6 134 aa8.55□□□□□ -1.04
TNFRSF1A-202ENST00000366159 MRPL54Q6P161 138 aaKnown RBP8.55□□□□□ -1.04
TNFRSF1A-202ENST00000366159 Q6ZUT4 128 aa8.55□□□□□ -1.04
TNFRSF1A-202ENST00000366159 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
TNFRSF1A-202ENST00000366159 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
TNFRSF1A-202ENST00000366159 IGLV4-69A0A075B6H9 119 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 D6R8Y8 96 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 ZNF561-AS1K7EIQ3 104 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 NPYP01303 97 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 S100A8P05109 93 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 RPL39P62891 51 aaKnown RBP8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 C7orf33Q8WU49 177 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 TMEM18Q96B42 140 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 TRAV13-1A0A0B4J241 112 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 F8W036 122 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 COX7A2LO14548 114 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 PPBPP02775 128 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 PRR3P79522 188 aaKnown RBP8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 PKIGQ9Y2B9 76 aa8.54□□□□□ -1.04
TNFRSF1A-202ENST00000366159 PRSS47A8MTI9 375 aa8.53□□□□□ -1.04
TNFRSF1A-202ENST00000366159 MRPS36P82909 103 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-202ENST00000366159 ATP5L2Q7Z4Y8 100 aa8.53□□□□□ -1.04
TNFRSF1A-202ENST00000366159 C2orf48Q96LS8 159 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms