RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TRBV6-4A0A1B0GX49 114 aa13.75□□□□□ -0.21
CLIP2-202ENST00000361545 LRCOL1A6NCL2 159 aa13.75□□□□□ -0.21
CLIP2-202ENST00000361545 M0R2N4 97 aa13.75□□□□□ -0.21
CLIP2-202ENST00000361545 UFSP1Q6NVU6 142 aa13.75□□□□□ -0.21
CLIP2-202ENST00000361545 HIGD1BQ9P298 99 aa13.75□□□□□ -0.21
CLIP2-202ENST00000361545 MBD6Q96DN6 1003 aa13.74□□□□□ -0.21
CLIP2-202ENST00000361545 LINC01620Q4KN68 170 aa13.74□□□□□ -0.21
CLIP2-202ENST00000361545 PRR9Q5T870 116 aa13.74□□□□□ -0.21
CLIP2-202ENST00000361545 NDUFB1O75438 58 aa13.73□□□□□ -0.21
CLIP2-202ENST00000361545 RBM3P98179 157 aaKnown RBP13.73□□□□□ -0.21
CLIP2-202ENST00000361545 NREPQ16612 68 aa13.73□□□□□ -0.21
CLIP2-202ENST00000361545 G3V4G9 280 aa13.73□□□□□ -0.21
CLIP2-202ENST00000361545 EDN2P20800 178 aa13.73□□□□□ -0.21
CLIP2-202ENST00000361545 TEN1Q86WV5 123 aa13.73□□□□□ -0.21
CLIP2-202ENST00000361545 KPRPQ5T749 579 aaPredicted RBP13.72□□□□□ -0.21
CLIP2-202ENST00000361545 B9D2Q9BPU9 175 aa13.72□□□□□ -0.21
CLIP2-202ENST00000361545 IGLV4-3A0A075B6K6 122 aa13.72□□□□□ -0.21
CLIP2-202ENST00000361545 SPANXCQ9NY87 97 aa13.72□□□□□ -0.21
CLIP2-202ENST00000361545 IGLV2-11P01706 119 aa13.72□□□□□ -0.21
CLIP2-202ENST00000361545 LOC100131303A0A0U1RQF7 123 aa13.71□□□□□ -0.21
CLIP2-202ENST00000361545 COX7BP24311 80 aa13.71□□□□□ -0.21
CLIP2-202ENST00000361545 FN1P02751 2386 aaKnown RBP13.71□□□□□ -0.21
CLIP2-202ENST00000361545 A0A087WZ39 114 aa13.71□□□□□ -0.21
CLIP2-202ENST00000361545 DCANP1Q8TF63 244 aa13.71□□□□□ -0.21
CLIP2-202ENST00000361545 HCFC1P51610 2035 aa13.71□□□□□ -0.21
CLIP2-202ENST00000361545 USP9YO00507 2555 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-202ENST00000361545 A0A0J9YXY3 114 aa13.7□□□□□ -0.22
CLIP2-202ENST00000361545 A0A096LNI7 61 aa13.7□□□□□ -0.22
CLIP2-202ENST00000361545 IGHV4-30-4P0DP06 118 aa13.7□□□□□ -0.22
CLIP2-202ENST00000361545 XAGE1AQ9HD64 81 aa13.7□□□□□ -0.22
CLIP2-202ENST00000361545 H7C423 109 aa13.7□□□□□ -0.22
CLIP2-202ENST00000361545 RNASE3P12724 160 aaKnown RBP13.7□□□□□ -0.22
CLIP2-202ENST00000361545 MIAQ16674 131 aa13.7□□□□□ -0.22
CLIP2-202ENST00000361545 FOXI1Q12951 378 aa13.69□□□□□ -0.22
CLIP2-202ENST00000361545 C11orf21Q9P2W6 132 aa13.69□□□□□ -0.22
CLIP2-202ENST00000361545 NDUFA7O95182 113 aa13.69□□□□□ -0.22
CLIP2-202ENST00000361545 LRRK2Q5S007 2527 aa13.69□□□□□ -0.22
CLIP2-202ENST00000361545 KIR2DL5BQ8NHK3 375 aa13.68□□□□□ -0.22
CLIP2-202ENST00000361545 IGKV3D-7A0A0C4DH55 119 aa13.68□□□□□ -0.22
CLIP2-202ENST00000361545 NANOS2P60321 138 aaKnown RBP13.68□□□□□ -0.22
CLIP2-202ENST00000361545 RBX1P62877 108 aa13.68□□□□□ -0.22
CLIP2-202ENST00000361545 ACYP1P07311 99 aa13.68□□□□□ -0.22
CLIP2-202ENST00000361545 LY6G6CO95867 125 aa13.67□□□□□ -0.22
CLIP2-202ENST00000361545 RNF185Q96GF1 192 aa13.67□□□□□ -0.22
CLIP2-202ENST00000361545 A0A0J9YWU9 116 aa13.67□□□□□ -0.22
CLIP2-202ENST00000361545 CLUHP3Q96NS8 147 aa13.67□□□□□ -0.22
CLIP2-202ENST00000361545 FAM19A5Q7Z5A7 132 aaPredicted RBP13.67□□□□□ -0.22
CLIP2-202ENST00000361545 FASNP49327 2511 aaKnown RBP13.67□□□□□ -0.22
CLIP2-202ENST00000361545 KLLNB2CW77 178 aa13.67□□□□□ -0.22
CLIP2-202ENST00000361545 ZNF22P17026 224 aaPredicted RBP13.66□□□□□ -0.22
CLIP2-202ENST00000361545 LINC00526Q96FQ7 95 aa13.66□□□□□ -0.22
CLIP2-202ENST00000361545 FAM236AA0A1B0GUQ0 79 aa13.66□□□□□ -0.22
CLIP2-202ENST00000361545 FAM236BA0A1B0GV22 79 aa13.66□□□□□ -0.22
CLIP2-202ENST00000361545 FAM19A1Q7Z5A9 133 aa13.66□□□□□ -0.22
CLIP2-202ENST00000361545 TMEM258P61165 79 aa13.66□□□□□ -0.22
CLIP2-202ENST00000361545 SPATA12Q7Z6I5 190 aa13.65□□□□□ -0.22
CLIP2-202ENST00000361545 IGKV2D-26A0A0A0MRZ7 120 aa13.64□□□□□ -0.23
CLIP2-202ENST00000361545 H3BQ85 93 aa13.64□□□□□ -0.23
CLIP2-202ENST00000361545 SYCNQ0VAF6 134 aa13.64□□□□□ -0.23
CLIP2-202ENST00000361545 JMJD7-PLA2G4BH0Y9G9 81 aa13.64□□□□□ -0.23
CLIP2-202ENST00000361545 ODF3L2Q3SX64 289 aa13.64□□□□□ -0.23
CLIP2-202ENST00000361545 COL5A1P20908 1838 aaPredicted RBP13.63□□□□□ -0.23
CLIP2-202ENST00000361545 RETNQ9HD89 108 aa13.63□□□□□ -0.23
CLIP2-202ENST00000361545 TMEM223A0PJW6 202 aa13.62□□□□□ -0.23
CLIP2-202ENST00000361545 TMEM256-PLSCR3K7ERE1 68 aa13.62□□□□□ -0.23
CLIP2-202ENST00000361545 PIK3CD-AS1Q5SR53 167 aa13.62□□□□□ -0.23
CLIP2-202ENST00000361545 TRBV27A0A0K0K1C4 114 aa13.61□□□□□ -0.23
CLIP2-202ENST00000361545 A0A1B0GX51 115 aa13.61□□□□□ -0.23
CLIP2-202ENST00000361545 H0Y9J4 135 aa13.61□□□□□ -0.23
CLIP2-202ENST00000361545 J3KT08 172 aa13.61□□□□□ -0.23
CLIP2-202ENST00000361545 A0A0B4J2C4 111 aa13.6□□□□□ -0.23
CLIP2-202ENST00000361545 TRBV10-2A0A0K0K1G8 114 aa13.6□□□□□ -0.23
CLIP2-202ENST00000361545 A8MZ25 164 aa13.6□□□□□ -0.23
CLIP2-202ENST00000361545 PTH2Q96A98 100 aa13.6□□□□□ -0.23
CLIP2-202ENST00000361545 TSHBP01222 138 aa13.6□□□□□ -0.23
CLIP2-202ENST00000361545 ATOX1O00244 68 aa13.59□□□□□ -0.23
CLIP2-202ENST00000361545 LELP1Q5T871 98 aa13.59□□□□□ -0.23
CLIP2-202ENST00000361545 C9orf85Q96MD7 179 aa13.59□□□□□ -0.23
CLIP2-202ENST00000361545 RAI1Q7Z5J4 1906 aaPredicted RBP13.58□□□□□ -0.24
CLIP2-202ENST00000361545 TRBV6-5A0A0K0K1A5 114 aa13.58□□□□□ -0.24
CLIP2-202ENST00000361545 IBA57-AS1B1ANH7 110 aa13.58□□□□□ -0.24
CLIP2-202ENST00000361545 C14orf132Q9NPU4 83 aa13.57□□□□□ -0.24
CLIP2-202ENST00000361545 IGLV1-51P01701 117 aa13.57□□□□□ -0.24
CLIP2-202ENST00000361545 TP73-AS1Q9UF72 201 aa13.57□□□□□ -0.24
CLIP2-202ENST00000361545 U3KQK5 164 aa13.57□□□□□ -0.24
CLIP2-202ENST00000361545 BRI3O95415 125 aa13.56□□□□□ -0.24
CLIP2-202ENST00000361545 NRACQ8N912 160 aa13.56□□□□□ -0.24
CLIP2-202ENST00000361545 CD164L2Q6UWJ8 174 aa13.56□□□□□ -0.24
CLIP2-202ENST00000361545 MRGPRG-AS1Q2M3A8 158 aa13.56□□□□□ -0.24
CLIP2-202ENST00000361545 GAS8-AS1O95177 125 aa13.55□□□□□ -0.24
CLIP2-202ENST00000361545 LINC00308Q8TCZ7 52 aa13.55□□□□□ -0.24
CLIP2-202ENST00000361545 IGKV2-28A0A075B6P5 120 aa13.55□□□□□ -0.24
CLIP2-202ENST00000361545 IGKV2D-28P01615 120 aa13.55□□□□□ -0.24
CLIP2-202ENST00000361545 H3BT86 120 aa13.54□□□□□ -0.24
CLIP2-202ENST00000361545 LINC00959A0A1B0GUT2 108 aa13.54□□□□□ -0.24
CLIP2-202ENST00000361545 PYGO1Q9Y3Y4 419 aa13.54□□□□□ -0.24
CLIP2-202ENST00000361545 MP68P56378 58 aa13.53□□□□□ -0.24
CLIP2-202ENST00000361545 TCL1BO95988 128 aa13.53□□□□□ -0.24
CLIP2-202ENST00000361545 SLPIP03973 132 aa13.53□□□□□ -0.24
CLIP2-202ENST00000361545 MAPKAPK5-AS1Q8N8E1 139 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms