RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 NPYP01303 97 aa11.09□□□□□ -0.63
FAM3D-201ENST00000358781 HAMPP81172 84 aa11.09□□□□□ -0.63
FAM3D-201ENST00000358781 Q6ZSA8 131 aa11.09□□□□□ -0.63
FAM3D-201ENST00000358781 CLRN3Q8NCR9 226 aa11.09□□□□□ -0.63
FAM3D-201ENST00000358781 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
FAM3D-201ENST00000358781 SEC11CQ9BY50 192 aa11.09□□□□□ -0.63
FAM3D-201ENST00000358781 VPS13BQ7Z7G8 4022 aa11.08□□□□□ -0.64
FAM3D-201ENST00000358781 GAGE12HA6NDE8 117 aa11.08□□□□□ -0.64
FAM3D-201ENST00000358781 TMEM136Q6ZRR5 245 aa11.08□□□□□ -0.64
FAM3D-201ENST00000358781 ORMDL3Q8N138 153 aa11.08□□□□□ -0.64
FAM3D-201ENST00000358781 CHCHD10Q8WYQ3 142 aaPredicted RBP11.08□□□□□ -0.64
FAM3D-201ENST00000358781 IMMP2LQ96T52 175 aa11.08□□□□□ -0.64
FAM3D-201ENST00000358781 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
FAM3D-201ENST00000358781 TCAPO15273 167 aa11.07□□□□□ -0.64
FAM3D-201ENST00000358781 DGAT2L7PQ6IED9 249 aa11.07□□□□□ -0.64
FAM3D-201ENST00000358781 PRELID3AQ96N28 172 aa11.07□□□□□ -0.64
FAM3D-201ENST00000358781 CTDSP1Q9GZU7 261 aa11.07□□□□□ -0.64
FAM3D-201ENST00000358781 SMAGPQ0VAQ4 97 aa11.06□□□□□ -0.64
FAM3D-201ENST00000358781 ZNF664Q8N3J9 261 aa11.06□□□□□ -0.64
FAM3D-201ENST00000358781 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
FAM3D-201ENST00000358781 CSDC2Q9Y534 153 aaKnown RBP11.06□□□□□ -0.64
FAM3D-201ENST00000358781 LINC00959A0A1B0GUT2 108 aa11.05□□□□□ -0.64
FAM3D-201ENST00000358781 TMEM18Q96B42 140 aa11.05□□□□□ -0.64
FAM3D-201ENST00000358781 hDV102S1A0JD36 115 aa11.04□□□□□ -0.64
FAM3D-201ENST00000358781 EPM2AB3EWF7 344 aa11.04□□□□□ -0.64
FAM3D-201ENST00000358781 TIMM21Q9BVV7 248 aa11.04□□□□□ -0.64
FAM3D-201ENST00000358781 SMR3BP02814 79 aaPredicted RBP11.03□□□□□ -0.64
FAM3D-201ENST00000358781 FOXI1Q12951 378 aa11.03□□□□□ -0.64
FAM3D-201ENST00000358781 C10orf91Q5T1B1 145 aa11.03□□□□□ -0.64
FAM3D-201ENST00000358781 CFAP161Q6P656 301 aa11.03□□□□□ -0.64
FAM3D-201ENST00000358781 C15orf56Q8N910 161 aa11.03□□□□□ -0.64
FAM3D-201ENST00000358781 LAMTOR2Q9Y2Q5 125 aa11.03□□□□□ -0.64
FAM3D-201ENST00000358781 CCL25O15444 150 aa11.02□□□□□ -0.65
FAM3D-201ENST00000358781 XCL1P47992 114 aa11.02□□□□□ -0.65
FAM3D-201ENST00000358781 CNBPP62633 177 aaKnown RBP11.02□□□□□ -0.65
FAM3D-201ENST00000358781 SS18Q15532 418 aa11.02□□□□□ -0.65
FAM3D-201ENST00000358781 C9orf163Q8N9P6 203 aa11.02□□□□□ -0.65
FAM3D-201ENST00000358781 AP5S1Q9NUS5 200 aa11.02□□□□□ -0.65
FAM3D-201ENST00000358781 TRAV9-1A0A075B6T8 112 aa11.01□□□□□ -0.65
FAM3D-201ENST00000358781 PRSS47A8MTI9 375 aa11.01□□□□□ -0.65
FAM3D-201ENST00000358781 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
FAM3D-201ENST00000358781 Q5VSD8 79 aa11.01□□□□□ -0.65
FAM3D-201ENST00000358781 CARHSP1Q9Y2V2 147 aaKnown RBP11.01□□□□□ -0.65
FAM3D-201ENST00000358781 RAB5AP20339 215 aa11□□□□□ -0.65
FAM3D-201ENST00000358781 RNASE13Q5GAN3 156 aaKnown RBP11□□□□□ -0.65
FAM3D-201ENST00000358781 Q6ZUT4 128 aa11□□□□□ -0.65
FAM3D-201ENST00000358781 MAP1LC3AQ9H492 121 aa11□□□□□ -0.65
FAM3D-201ENST00000358781 SLPIP03973 132 aa10.99□□□□□ -0.65
FAM3D-201ENST00000358781 CD164L2Q6UWJ8 174 aa10.99□□□□□ -0.65
FAM3D-201ENST00000358781 SCXQ7RTU7 201 aa10.99□□□□□ -0.65
FAM3D-201ENST00000358781 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
FAM3D-201ENST00000358781 SPANXA1Q9NS26 97 aa10.99□□□□□ -0.65
FAM3D-201ENST00000358781 SRRM2Q9UQ35 2752 aaKnown RBP10.99□□□□□ -0.65
FAM3D-201ENST00000358781 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.98□□□□□ -0.65
FAM3D-201ENST00000358781 LOC389332A0A1B0GUA5 103 aa10.98□□□□□ -0.65
FAM3D-201ENST00000358781 C1orf196B1AJZ1 125 aa10.98□□□□□ -0.65
FAM3D-201ENST00000358781 S100PP25815 95 aa10.98□□□□□ -0.65
FAM3D-201ENST00000358781 GVQW2A0A096LPI5 108 aaPredicted RBP10.97□□□□□ -0.65
FAM3D-201ENST00000358781 FAM229AH3BQW9 127 aa10.97□□□□□ -0.65
FAM3D-201ENST00000358781 RHEBQ15382 184 aa10.97□□□□□ -0.65
FAM3D-201ENST00000358781 HIGD2BQ4VC39 106 aa10.97□□□□□ -0.65
FAM3D-201ENST00000358781 SDIM1Q6ZPB5 146 aa10.97□□□□□ -0.65
FAM3D-201ENST00000358781 Q8N8P6 123 aa10.97□□□□□ -0.65
FAM3D-201ENST00000358781 FAM104AQ969W3 186 aa10.97□□□□□ -0.65
FAM3D-201ENST00000358781 TRAV13-1A0A0B4J241 112 aa10.96□□□□□ -0.65
FAM3D-201ENST00000358781 MRPS36P82909 103 aaKnown RBP10.96□□□□□ -0.65
FAM3D-201ENST00000358781 IGHV3-64A0A075B6Q5 118 aa10.95□□□□□ -0.66
FAM3D-201ENST00000358781 IGHV1-58A0A0C4DH39 117 aa10.95□□□□□ -0.66
FAM3D-201ENST00000358781 CIRBP-AS1Q8TBR5 109 aa10.95□□□□□ -0.66
FAM3D-201ENST00000358781 RPS10P5Q9NQ39 176 aa10.95□□□□□ -0.66
FAM3D-201ENST00000358781 OPRPNQ99935 248 aaPredicted RBP10.94□□□□□ -0.66
FAM3D-201ENST00000358781 GNB1LQ9BYB4 327 aa10.94□□□□□ -0.66
FAM3D-201ENST00000358781 COX7A2LO14548 114 aa10.93□□□□□ -0.66
FAM3D-201ENST00000358781 KIAA1644Q3SXP7 199 aa10.93□□□□□ -0.66
FAM3D-201ENST00000358781 NXT2Q9NPJ8 142 aaKnown RBP10.93□□□□□ -0.66
FAM3D-201ENST00000358781 PYGO1Q9Y3Y4 419 aa10.93□□□□□ -0.66
FAM3D-201ENST00000358781 IFI27P40305 119 aaPredicted RBP10.92□□□□□ -0.66
FAM3D-201ENST00000358781 LINC00528Q8N1L1 170 aa10.92□□□□□ -0.66
FAM3D-201ENST00000358781 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
FAM3D-201ENST00000358781 PANO1I0J062 215 aa10.91□□□□□ -0.66
FAM3D-201ENST00000358781 K7EMI3 77 aa10.91□□□□□ -0.66
FAM3D-201ENST00000358781 MALP21145 153 aa10.91□□□□□ -0.66
FAM3D-201ENST00000358781 COX19Q49B96 90 aa10.91□□□□□ -0.66
FAM3D-201ENST00000358781 IFITM10A6NMD0 228 aa10.9□□□□□ -0.66
FAM3D-201ENST00000358781 APOC3P02656 99 aa10.9□□□□□ -0.66
FAM3D-201ENST00000358781 INAFM2P0DMQ5 153 aa10.9□□□□□ -0.66
FAM3D-201ENST00000358781 ORMDL2Q53FV1 153 aa10.9□□□□□ -0.66
FAM3D-201ENST00000358781 CYSLTR1Q9Y271 337 aa10.9□□□□□ -0.66
FAM3D-201ENST00000358781 IGLV4-3A0A075B6K6 122 aa10.89□□□□□ -0.67
FAM3D-201ENST00000358781 CIRBPQ14011 172 aaKnown RBP10.89□□□□□ -0.67
FAM3D-201ENST00000358781 NDUFA5Q16718 116 aa10.89□□□□□ -0.67
FAM3D-201ENST00000358781 C2orf66Q6UXQ4 117 aa10.89□□□□□ -0.67
FAM3D-201ENST00000358781 C5orf38Q86SI9 138 aa10.89□□□□□ -0.67
FAM3D-201ENST00000358781 LINC00526Q96FQ7 95 aa10.89□□□□□ -0.67
FAM3D-201ENST00000358781 ZNF561-AS1K7EIQ3 104 aa10.88□□□□□ -0.67
FAM3D-201ENST00000358781 MT-ND6P03923 174 aa10.88□□□□□ -0.67
FAM3D-201ENST00000358781 PLA2G1BP04054 148 aaKnown RBP10.88□□□□□ -0.67
FAM3D-201ENST00000358781 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
FAM3D-201ENST00000358781 SNAPINO95295 136 aa10.87□□□□□ -0.67
FAM3D-201ENST00000358781 SVBPQ8N300 66 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms