RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 MYO9AB2RTY4 2548 aa12.78□□□□□ -0.36
CDK11A-204ENST00000358779 UBR5O95071 2799 aaPredicted RBP12.78□□□□□ -0.36
CDK11A-204ENST00000358779 XGP55808 180 aa12.78□□□□□ -0.36
CDK11A-204ENST00000358779 YAE1D1Q9NRH1 226 aa12.78□□□□□ -0.36
CDK11A-204ENST00000358779 ICOSQ9Y6W8 199 aa12.78□□□□□ -0.36
CDK11A-204ENST00000358779 A0A1W2PRX2 142 aa12.77□□□□□ -0.37
CDK11A-204ENST00000358779 NDUFA1O15239 70 aa12.77□□□□□ -0.37
CDK11A-204ENST00000358779 MT-ATP8P03928 68 aa12.77□□□□□ -0.37
CDK11A-204ENST00000358779 ZNF843Q8N446 348 aa12.77□□□□□ -0.37
CDK11A-204ENST00000358779 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.77□□□□□ -0.37
CDK11A-204ENST00000358779 TMEM101Q96IK0 257 aa12.77□□□□□ -0.37
CDK11A-204ENST00000358779 DNAJC9-AS1A6NH13 148 aa12.77□□□□□ -0.37
CDK11A-204ENST00000358779 C11orf44Q8N8P7 122 aa12.77□□□□□ -0.37
CDK11A-204ENST00000358779 USP24Q9UPU5 2620 aa12.76□□□□□ -0.37
CDK11A-204ENST00000358779 ZFYVE26Q68DK2 2539 aa12.76□□□□□ -0.37
CDK11A-204ENST00000358779 ABCA12Q86UK0 2595 aa12.76□□□□□ -0.37
CDK11A-204ENST00000358779 COX6A2Q02221 97 aa12.76□□□□□ -0.37
CDK11A-204ENST00000358779 A0A1B0GV72 72 aa12.75□□□□□ -0.37
CDK11A-204ENST00000358779 K7EQD1 137 aa12.75□□□□□ -0.37
CDK11A-204ENST00000358779 RNF183Q96D59 192 aa12.75□□□□□ -0.37
CDK11A-204ENST00000358779 LINC00694P0DN24 101 aa12.74□□□□□ -0.37
CDK11A-204ENST00000358779 IFITM1P13164 125 aa12.74□□□□□ -0.37
CDK11A-204ENST00000358779 HERVK_113P63121 156 aa12.74□□□□□ -0.37
CDK11A-204ENST00000358779 AKAP9Q99996 3911 aa12.74□□□□□ -0.37
CDK11A-204ENST00000358779 RPL36AP83881 106 aaKnown RBP12.74□□□□□ -0.37
CDK11A-204ENST00000358779 Q6ZTI0 123 aa12.74□□□□□ -0.37
CDK11A-204ENST00000358779 RPL36ALQ969Q0 106 aaKnown RBP12.74□□□□□ -0.37
CDK11A-204ENST00000358779 CCL24O00175 119 aa12.73□□□□□ -0.37
CDK11A-204ENST00000358779 LINC00242Q5T6M2 205 aa12.73□□□□□ -0.37
CDK11A-204ENST00000358779 DAND5Q8N907 189 aa12.73□□□□□ -0.37
CDK11A-204ENST00000358779 NTN5Q8WTR8 489 aaPredicted RBP12.73□□□□□ -0.37
CDK11A-204ENST00000358779 LINC01600Q96MT4 127 aa12.73□□□□□ -0.37
CDK11A-204ENST00000358779 IGLV5-39A0A0G2JS06 123 aa12.73□□□□□ -0.37
CDK11A-204ENST00000358779 TRBV10-1A0A0K0K1A3 114 aa12.73□□□□□ -0.37
CDK11A-204ENST00000358779 TRBV10-2A0A0K0K1G8 114 aa12.73□□□□□ -0.37
CDK11A-204ENST00000358779 TMEM262E9PQX1 116 aa12.72□□□□□ -0.37
CDK11A-204ENST00000358779 RPL13AP40429 203 aaKnown RBP12.72□□□□□ -0.37
CDK11A-204ENST00000358779 FAM19A3Q7Z5A8 133 aa12.72□□□□□ -0.37
CDK11A-204ENST00000358779 TRAV4A0A0B4J268 109 aa12.71□□□□□ -0.37
CDK11A-204ENST00000358779 COX6CP09669 75 aa12.71□□□□□ -0.37
CDK11A-204ENST00000358779 NTM-AS1Q6ZSK4 140 aa12.71□□□□□ -0.37
CDK11A-204ENST00000358779 CIDEAO60543 219 aa12.71□□□□□ -0.38
CDK11A-204ENST00000358779 DAZ2Q13117 558 aaKnown RBP12.71□□□□□ -0.38
CDK11A-204ENST00000358779 DAZ4Q86SG3 579 aaKnown RBP12.71□□□□□ -0.38
CDK11A-204ENST00000358779 Q9H8V8 135 aa12.71□□□□□ -0.38
CDK11A-204ENST00000358779 DAZ3Q9NR90 486 aaKnown RBP12.71□□□□□ -0.38
CDK11A-204ENST00000358779 CSDC2Q9Y534 153 aaKnown RBP12.71□□□□□ -0.38
CDK11A-204ENST00000358779 NDUFA7O95182 113 aa12.7□□□□□ -0.38
CDK11A-204ENST00000358779 CKS1BP61024 79 aa12.7□□□□□ -0.38
CDK11A-204ENST00000358779 CIRBPQ14011 172 aaKnown RBP12.7□□□□□ -0.38
CDK11A-204ENST00000358779 ESM1Q9NQ30 184 aa12.7□□□□□ -0.38
CDK11A-204ENST00000358779 WNK1Q9H4A3 2382 aa12.7□□□□□ -0.38
CDK11A-204ENST00000358779 TEX29Q8N6K0 151 aa12.7□□□□□ -0.38
CDK11A-204ENST00000358779 SMIM1B2RUZ4 78 aa12.69□□□□□ -0.38
CDK11A-204ENST00000358779 CHD6Q8TD26 2715 aa12.69□□□□□ -0.38
CDK11A-204ENST00000358779 TRAV13-1A0A0B4J241 112 aa12.69□□□□□ -0.38
CDK11A-204ENST00000358779 GAGE12JA6NER3 117 aa12.69□□□□□ -0.38
CDK11A-204ENST00000358779 GAGE4Q13068 117 aa12.69□□□□□ -0.38
CDK11A-204ENST00000358779 GAGE5Q13069 117 aa12.69□□□□□ -0.38
CDK11A-204ENST00000358779 CLEC2BQ92478 149 aa12.69□□□□□ -0.38
CDK11A-204ENST00000358779 WFDC11Q8NEX6 87 aa12.68□□□□□ -0.38
CDK11A-204ENST00000358779 LINC00308Q8TCZ7 52 aa12.68□□□□□ -0.38
CDK11A-204ENST00000358779 CITED2Q99967 270 aaPredicted RBP12.68□□□□□ -0.38
CDK11A-204ENST00000358779 NOP10Q9NPE3 64 aaKnown RBP12.68□□□□□ -0.38
CDK11A-204ENST00000358779 TLN2Q9Y4G6 2542 aa12.67□□□□□ -0.38
CDK11A-204ENST00000358779 H7C423 109 aa12.67□□□□□ -0.38
CDK11A-204ENST00000358779 C2orf82Q6UX34 121 aa12.67□□□□□ -0.38
CDK11A-204ENST00000358779 UBE2WQ96B02 151 aa12.67□□□□□ -0.38
CDK11A-204ENST00000358779 ZNF625Q96I27 306 aaPredicted RBP12.67□□□□□ -0.38
CDK11A-204ENST00000358779 ZNF469Q96JG9 3925 aaPredicted RBP12.67□□□□□ -0.38
CDK11A-204ENST00000358779 TEX49A0A1B0GTD5 131 aa12.67□□□□□ -0.38
CDK11A-204ENST00000358779 LST1O00453 97 aa12.67□□□□□ -0.38
CDK11A-204ENST00000358779 CDC42SE2Q9NRR3 84 aa12.66□□□□□ -0.38
CDK11A-204ENST00000358779 EPG5Q9HCE0 2579 aa12.66□□□□□ -0.38
CDK11A-204ENST00000358779 H3BT86 120 aa12.66□□□□□ -0.38
CDK11A-204ENST00000358779 GIG44P09565 113 aaPredicted RBP12.66□□□□□ -0.38
CDK11A-204ENST00000358779 ITPR3Q14573 2671 aa12.65□□□□□ -0.38
CDK11A-204ENST00000358779 A0A0U1RRA0 63 aa12.64□□□□□ -0.39
CDK11A-204ENST00000358779 SONP18583 2426 aaKnown RBP12.64□□□□□ -0.39
CDK11A-204ENST00000358779 F5H768 121 aa12.64□□□□□ -0.39
CDK11A-204ENST00000358779 C16orf74Q96GX8 76 aa12.64□□□□□ -0.39
CDK11A-204ENST00000358779 WFDC10AQ9H1F0 79 aa12.64□□□□□ -0.39
CDK11A-204ENST00000358779 PLAC8L1A1L4L8 177 aa12.63□□□□□ -0.39
CDK11A-204ENST00000358779 UBE2L6O14933 153 aa12.63□□□□□ -0.39
CDK11A-204ENST00000358779 TMEM243Q9BU79 118 aa12.63□□□□□ -0.39
CDK11A-204ENST00000358779 CMC4P56277 68 aaPredicted RBP12.63□□□□□ -0.39
CDK11A-204ENST00000358779 PRIMA1Q86XR5 153 aa12.63□□□□□ -0.39
CDK11A-204ENST00000358779 APCP25054 2843 aa12.63□□□□□ -0.39
CDK11A-204ENST00000358779 SOSTDC1Q6X4U4 206 aa12.62□□□□□ -0.39
CDK11A-204ENST00000358779 COPS9Q8WXC6 57 aa12.62□□□□□ -0.39
CDK11A-204ENST00000358779 TRAV8-4A0A0B4J246 113 aa12.62□□□□□ -0.39
CDK11A-204ENST00000358779 GAGE7O76087 117 aa12.62□□□□□ -0.39
CDK11A-204ENST00000358779 GAGE12FP0CL80 117 aa12.62□□□□□ -0.39
CDK11A-204ENST00000358779 GAGE12GP0CL81 117 aa12.62□□□□□ -0.39
CDK11A-204ENST00000358779 GAGE12IP0CL82 117 aa12.62□□□□□ -0.39
CDK11A-204ENST00000358779 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
CDK11A-204ENST00000358779 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
CDK11A-204ENST00000358779 RPL35AP18077 110 aaKnown RBP12.61□□□□□ -0.39
CDK11A-204ENST00000358779 CITED1Q99966 193 aa12.61□□□□□ -0.39
CDK11A-204ENST00000358779 LOC100131303A0A0U1RQF7 123 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms