RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 F5H697 171 aa9.23□□□□□ -0.93
RTFDC1-202ENST00000357348 TRPT1Q86TN4 253 aaKnown RBP9.23□□□□□ -0.93
RTFDC1-202ENST00000357348 TRBV30A0A0K0K1B3 111 aa9.23□□□□□ -0.93
RTFDC1-202ENST00000357348 ZNF256Q9Y2P7 627 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-202ENST00000357348 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
RTFDC1-202ENST00000357348 LINC01620Q4KN68 170 aa9.22□□□□□ -0.93
RTFDC1-202ENST00000357348 Q6Q795 121 aa9.22□□□□□ -0.93
RTFDC1-202ENST00000357348 OPRPNQ99935 248 aaPredicted RBP9.22□□□□□ -0.93
RTFDC1-202ENST00000357348 EDA2RQ9HAV5 297 aa9.22□□□□□ -0.93
RTFDC1-202ENST00000357348 IGLV4-3A0A075B6K6 122 aa9.21□□□□□ -0.93
RTFDC1-202ENST00000357348 A0A0J9YXY3 114 aa9.21□□□□□ -0.93
RTFDC1-202ENST00000357348 K7EQG2 157 aa9.21□□□□□ -0.93
RTFDC1-202ENST00000357348 IGKV3-20P01619 116 aa9.21□□□□□ -0.93
RTFDC1-202ENST00000357348 DEFB104AQ8WTQ1 72 aa9.21□□□□□ -0.93
RTFDC1-202ENST00000357348 LITAFQ99732 161 aa9.21□□□□□ -0.93
RTFDC1-202ENST00000357348 MUC4Q99102 2169 aa9.21□□□□□ -0.93
RTFDC1-202ENST00000357348 TRAV2A0A0B4J234 112 aa9.21□□□□□ -0.94
RTFDC1-202ENST00000357348 TRAV12-3A0A0B4J271 114 aa9.21□□□□□ -0.94
RTFDC1-202ENST00000357348 TRBV10-2A0A0K0K1G8 114 aa9.21□□□□□ -0.94
RTFDC1-202ENST00000357348 NHLRC4P0CG21 123 aaPredicted RBP9.21□□□□□ -0.94
RTFDC1-202ENST00000357348 SNRPD3P62318 126 aaKnown RBP9.21□□□□□ -0.94
RTFDC1-202ENST00000357348 Q8N1Y9 231 aa9.21□□□□□ -0.94
RTFDC1-202ENST00000357348 ANAPC13Q9BS18 74 aa9.21□□□□□ -0.94
RTFDC1-202ENST00000357348 PYGO1Q9Y3Y4 419 aa9.21□□□□□ -0.94
RTFDC1-202ENST00000357348 I3L3M4 83 aa9.2□□□□□ -0.94
RTFDC1-202ENST00000357348 FAM104AQ969W3 186 aa9.2□□□□□ -0.94
RTFDC1-202ENST00000357348 A0A0J9YXV3 536 aa9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 DEFB131AP59861 70 aa9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 GAGE5Q13069 117 aa9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 GAGE6Q13070 117 aa9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 ZNF56Q15929 161 aa9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 NTN5Q8WTR8 489 aaPredicted RBP9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 SPANXDQ9BXN6 97 aa9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 MRPS36P82909 103 aaKnown RBP9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 FAM74A4Q5TZK3 123 aa9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 MDFIQ99750 246 aa9.19□□□□□ -0.94
RTFDC1-202ENST00000357348 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
RTFDC1-202ENST00000357348 KNCNA6PVL3 124 aa9.18□□□□□ -0.94
RTFDC1-202ENST00000357348 IGLV1-51P01701 117 aa9.18□□□□□ -0.94
RTFDC1-202ENST00000357348 IGHV3-30-3P0DP02 117 aa9.18□□□□□ -0.94
RTFDC1-202ENST00000357348 IGHV1OR15-1A0A075B7D0 117 aa9.17□□□□□ -0.94
RTFDC1-202ENST00000357348 TRIAP1O43715 76 aa9.17□□□□□ -0.94
RTFDC1-202ENST00000357348 GAGE2BQ13066 116 aa9.17□□□□□ -0.94
RTFDC1-202ENST00000357348 GAGE2EQ4V326 116 aa9.17□□□□□ -0.94
RTFDC1-202ENST00000357348 WFDC10AQ9H1F0 79 aa9.17□□□□□ -0.94
RTFDC1-202ENST00000357348 GAGE2DQ9UEU5 116 aa9.17□□□□□ -0.94
RTFDC1-202ENST00000357348 TRAV4A0A0B4J268 109 aa9.16□□□□□ -0.94
RTFDC1-202ENST00000357348 SNCGO76070 127 aa9.16□□□□□ -0.94
RTFDC1-202ENST00000357348 MRPL23Q16540 153 aaKnown RBP9.16□□□□□ -0.94
RTFDC1-202ENST00000357348 SHISA2Q6UWI4 295 aa9.16□□□□□ -0.94
RTFDC1-202ENST00000357348 MAP6D1Q9H9H5 199 aa9.16□□□□□ -0.94
RTFDC1-202ENST00000357348 NDUFV3P56181 108 aaKnown RBP9.16□□□□□ -0.94
RTFDC1-202ENST00000357348 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
RTFDC1-202ENST00000357348 IGHV1-58A0A0C4DH39 117 aa9.15□□□□□ -0.94
RTFDC1-202ENST00000357348 H3BT86 120 aa9.15□□□□□ -0.94
RTFDC1-202ENST00000357348 SPINK13Q1W4C9 94 aa9.15□□□□□ -0.94
RTFDC1-202ENST00000357348 TIMM21Q9BVV7 248 aa9.15□□□□□ -0.94
RTFDC1-202ENST00000357348 CMYA5Q8N3K9 4069 aa9.15□□□□□ -0.94
RTFDC1-202ENST00000357348 IGHV3-64A0A075B6Q5 118 aa9.15□□□□□ -0.95
RTFDC1-202ENST00000357348 TRAV8-4A0A0B4J246 113 aa9.15□□□□□ -0.95
RTFDC1-202ENST00000357348 H7C2G1 150 aa9.15□□□□□ -0.95
RTFDC1-202ENST00000357348 Q1RN00 199 aa9.15□□□□□ -0.95
RTFDC1-202ENST00000357348 ODF3L2Q3SX64 289 aa9.15□□□□□ -0.95
RTFDC1-202ENST00000357348 ICOSQ9Y6W8 199 aa9.15□□□□□ -0.95
RTFDC1-202ENST00000357348 TEX49A0A1B0GTD5 131 aa9.14□□□□□ -0.95
RTFDC1-202ENST00000357348 H3BMM0 161 aa9.14□□□□□ -0.95
RTFDC1-202ENST00000357348 MIAQ16674 131 aa9.14□□□□□ -0.95
RTFDC1-202ENST00000357348 UBE2WQ96B02 151 aa9.14□□□□□ -0.95
RTFDC1-202ENST00000357348 TRGV11A0A075B6L2 103 aa9.13□□□□□ -0.95
RTFDC1-202ENST00000357348 TRAV25A0A0B4J276 109 aa9.13□□□□□ -0.95
RTFDC1-202ENST00000357348 H7C423 109 aa9.13□□□□□ -0.95
RTFDC1-202ENST00000357348 OXLD1Q5BKU9 147 aa9.13□□□□□ -0.95
RTFDC1-202ENST00000357348 ADAMTSL4-AS1Q5T5F5 129 aa9.13□□□□□ -0.95
RTFDC1-202ENST00000357348 C9orf66Q5T8R8 295 aa9.13□□□□□ -0.95
RTFDC1-202ENST00000357348 FAM240AA0A1B0GVK7 77 aa9.13□□□□□ -0.95
RTFDC1-202ENST00000357348 TINCRA0A1B0GVN0 87 aa9.13□□□□□ -0.95
RTFDC1-202ENST00000357348 TIMM17BO60830 172 aa9.13□□□□□ -0.95
RTFDC1-202ENST00000357348 SPXQ9BT56 116 aa9.13□□□□□ -0.95
RTFDC1-202ENST00000357348 IFITM1P13164 125 aa9.12□□□□□ -0.95
RTFDC1-202ENST00000357348 VSIG2Q96IQ7 327 aa9.12□□□□□ -0.95
RTFDC1-202ENST00000357348 C2orf82Q6UX34 121 aa9.12□□□□□ -0.95
RTFDC1-202ENST00000357348 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
RTFDC1-202ENST00000357348 ANK2Q01484 3957 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 LST1O00453 97 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 C15orf53Q8NAA6 179 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 WFDC9Q8NEX5 89 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 SPANXA1Q9NS26 97 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 GAGE12JA6NER3 117 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 GAGE7O76087 117 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 GAGE12FP0CL80 117 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 GAGE12GP0CL81 117 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 GAGE12IP0CL82 117 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 GAGE4Q13068 117 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 PIK3CD-AS1Q5SR53 167 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 SS18L2Q9UHA2 77 aa9.11□□□□□ -0.95
RTFDC1-202ENST00000357348 COX6CP09669 75 aa9.1□□□□□ -0.95
RTFDC1-202ENST00000357348 TTC32Q5I0X7 151 aa9.1□□□□□ -0.95
RTFDC1-202ENST00000357348 RBMY1BA6NDE4 496 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms