RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 CKS2P33552 79 aa11.13□□□□□ -0.63
NCL-202ENST00000356936 CNBPP62633 177 aaKnown RBP11.13□□□□□ -0.63
NCL-202ENST00000356936 CHCHD10Q8WYQ3 142 aaPredicted RBP11.13□□□□□ -0.63
NCL-202ENST00000356936 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
NCL-202ENST00000356936 TCAPO15273 167 aa11.12□□□□□ -0.63
NCL-202ENST00000356936 MRPL54Q6P161 138 aaKnown RBP11.12□□□□□ -0.63
NCL-202ENST00000356936 ATP5L2Q7Z4Y8 100 aa11.12□□□□□ -0.63
NCL-202ENST00000356936 TRBV24-1A0A075B6N3 115 aa11.11□□□□□ -0.63
NCL-202ENST00000356936 A0A1B0GXF2 115 aa11.11□□□□□ -0.63
NCL-202ENST00000356936 CLLU1Q5K131 121 aa11.11□□□□□ -0.63
NCL-202ENST00000356936 LINC00528Q8N1L1 170 aa11.11□□□□□ -0.63
NCL-202ENST00000356936 TMEM18Q96B42 140 aa11.11□□□□□ -0.63
NCL-202ENST00000356936 PPBPP02775 128 aa11.1□□□□□ -0.63
NCL-202ENST00000356936 MT-ND4LP03901 98 aa11.1□□□□□ -0.63
NCL-202ENST00000356936 RPL32P62910 135 aaKnown RBP11.1□□□□□ -0.63
NCL-202ENST00000356936 ZNF664Q8N3J9 261 aa11.1□□□□□ -0.63
NCL-202ENST00000356936 CIRBP-AS1Q8TBR5 109 aa11.1□□□□□ -0.63
NCL-202ENST00000356936 ANAPC16Q96DE5 110 aa11.1□□□□□ -0.63
NCL-202ENST00000356936 CDC42SE2Q9NRR3 84 aa11.1□□□□□ -0.63
NCL-202ENST00000356936 CSDC2Q9Y534 153 aaKnown RBP11.1□□□□□ -0.63
NCL-202ENST00000356936 LINC00959A0A1B0GUT2 108 aa11.09□□□□□ -0.63
NCL-202ENST00000356936 TNFRSF6BO95407 300 aa11.09□□□□□ -0.63
NCL-202ENST00000356936 SS18Q15532 418 aa11.09□□□□□ -0.63
NCL-202ENST00000356936 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
NCL-202ENST00000356936 D6R8Y8 96 aa11.08□□□□□ -0.64
NCL-202ENST00000356936 PHOX2AO14813 284 aa11.08□□□□□ -0.64
NCL-202ENST00000356936 KRTAP3-3Q9BYR6 98 aa11.08□□□□□ -0.64
NCL-202ENST00000356936 KRTAP3-2Q9BYR7 98 aa11.08□□□□□ -0.64
NCL-202ENST00000356936 XCL1P47992 114 aa11.07□□□□□ -0.64
NCL-202ENST00000356936 FOXI1Q12951 378 aa11.07□□□□□ -0.64
NCL-202ENST00000356936 SDIM1Q6ZPB5 146 aa11.07□□□□□ -0.64
NCL-202ENST00000356936 C15orf56Q8N910 161 aa11.07□□□□□ -0.64
NCL-202ENST00000356936 CCL25O15444 150 aa11.06□□□□□ -0.64
NCL-202ENST00000356936 UQCC3Q6UW78 93 aa11.06□□□□□ -0.64
NCL-202ENST00000356936 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
NCL-202ENST00000356936 TIMM21Q9BVV7 248 aa11.06□□□□□ -0.64
NCL-202ENST00000356936 SMIM2Q9BVW6 85 aa11.06□□□□□ -0.64
NCL-202ENST00000356936 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
NCL-202ENST00000356936 C1orf196B1AJZ1 125 aa11.05□□□□□ -0.64
NCL-202ENST00000356936 GVQW2A0A096LPI5 108 aaPredicted RBP11.04□□□□□ -0.64
NCL-202ENST00000356936 SLPIP03973 132 aa11.04□□□□□ -0.64
NCL-202ENST00000356936 HIGD2BQ4VC39 106 aa11.04□□□□□ -0.64
NCL-202ENST00000356936 CD164L2Q6UWJ8 174 aa11.04□□□□□ -0.64
NCL-202ENST00000356936 TMEM136Q6ZRR5 245 aa11.04□□□□□ -0.64
NCL-202ENST00000356936 IGHV1-58A0A0C4DH39 117 aa11.03□□□□□ -0.64
NCL-202ENST00000356936 NPYP01303 97 aa11.03□□□□□ -0.64
NCL-202ENST00000356936 RAB5AP20339 215 aa11.02□□□□□ -0.65
NCL-202ENST00000356936 PRELID3AQ96N28 172 aa11.02□□□□□ -0.65
NCL-202ENST00000356936 LAMTOR2Q9Y2Q5 125 aa11.02□□□□□ -0.65
NCL-202ENST00000356936 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.02□□□□□ -0.65
NCL-202ENST00000356936 IFITM2Q01629 132 aa11.01□□□□□ -0.65
NCL-202ENST00000356936 DPH3Q96FX2 82 aa11.01□□□□□ -0.65
NCL-202ENST00000356936 SPANXA1Q9NS26 97 aa11.01□□□□□ -0.65
NCL-202ENST00000356936 PKIGQ9Y2B9 76 aa11.01□□□□□ -0.65
NCL-202ENST00000356936 CIRBPQ14011 172 aaKnown RBP11□□□□□ -0.65
NCL-202ENST00000356936 IMMP2LQ96T52 175 aa11□□□□□ -0.65
NCL-202ENST00000356936 TRAV13-1A0A0B4J241 112 aa10.99□□□□□ -0.65
NCL-202ENST00000356936 TMEM218A2RU14 115 aa10.99□□□□□ -0.65
NCL-202ENST00000356936 MALP21145 153 aa10.99□□□□□ -0.65
NCL-202ENST00000356936 Q6ZUT4 128 aa10.99□□□□□ -0.65
NCL-202ENST00000356936 PRSS47A8MTI9 375 aa10.98□□□□□ -0.65
NCL-202ENST00000356936 ZNF561-AS1K7EIQ3 104 aa10.98□□□□□ -0.65
NCL-202ENST00000356936 COX7A2LO14548 114 aa10.98□□□□□ -0.65
NCL-202ENST00000356936 RPL39P62891 51 aaKnown RBP10.98□□□□□ -0.65
NCL-202ENST00000356936 RNASE13Q5GAN3 156 aaKnown RBP10.98□□□□□ -0.65
NCL-202ENST00000356936 CTDSP1Q9GZU7 261 aa10.98□□□□□ -0.65
NCL-202ENST00000356936 MAP1LC3AQ9H492 121 aa10.98□□□□□ -0.65
NCL-202ENST00000356936 FAT1Q14517 4588 aa10.98□□□□□ -0.65
NCL-202ENST00000356936 SRRM2Q9UQ35 2752 aaKnown RBP10.97□□□□□ -0.65
NCL-202ENST00000356936 PANO1I0J062 215 aa10.97□□□□□ -0.65
NCL-202ENST00000356936 MRPS36P82909 103 aaKnown RBP10.97□□□□□ -0.65
NCL-202ENST00000356936 ADCYAP1P18509 176 aa10.96□□□□□ -0.65
NCL-202ENST00000356936 RPL37AP61513 92 aaKnown RBP10.96□□□□□ -0.65
NCL-202ENST00000356936 COX6A2Q02221 97 aa10.96□□□□□ -0.65
NCL-202ENST00000356936 SPACA4Q8TDM5 124 aa10.96□□□□□ -0.65
NCL-202ENST00000356936 SEC11CQ9BY50 192 aa10.96□□□□□ -0.65
NCL-202ENST00000356936 APOMO95445 188 aa10.95□□□□□ -0.66
NCL-202ENST00000356936 IFI27P40305 119 aaPredicted RBP10.95□□□□□ -0.66
NCL-202ENST00000356936 CARD19Q96LW7 228 aa10.95□□□□□ -0.66
NCL-202ENST00000356936 LINC00474Q9P2X8 69 aa10.95□□□□□ -0.66
NCL-202ENST00000356936 DNAH8Q96JB1 4490 aa10.94□□□□□ -0.66
NCL-202ENST00000356936 TRAV9-1A0A075B6T8 112 aa10.94□□□□□ -0.66
NCL-202ENST00000356936 CHTF8P0CG12 524 aa10.94□□□□□ -0.66
NCL-202ENST00000356936 PYGO1Q9Y3Y4 419 aa10.94□□□□□ -0.66
NCL-202ENST00000356936 A0A087WYN8 130 aa10.93□□□□□ -0.66
NCL-202ENST00000356936 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
NCL-202ENST00000356936 K7EMI3 77 aa10.93□□□□□ -0.66
NCL-202ENST00000356936 KRTAP10-4P60372 401 aaPredicted RBP10.93□□□□□ -0.66
NCL-202ENST00000356936 SYCNQ0VAF6 134 aa10.93□□□□□ -0.66
NCL-202ENST00000356936 Q8N8P6 123 aa10.93□□□□□ -0.66
NCL-202ENST00000356936 PRSS3P2Q8NHM4 247 aa10.93□□□□□ -0.66
NCL-202ENST00000356936 IFITM10A6NMD0 228 aa10.92□□□□□ -0.66
NCL-202ENST00000356936 S100PP25815 95 aa10.92□□□□□ -0.66
NCL-202ENST00000356936 COMMD7Q86VX2 200 aa10.92□□□□□ -0.66
NCL-202ENST00000356936 LINC00526Q96FQ7 95 aa10.92□□□□□ -0.66
NCL-202ENST00000356936 PLAC8Q9NZF1 115 aa10.92□□□□□ -0.66
NCL-202ENST00000356936 VPS13BQ7Z7G8 4022 aa10.91□□□□□ -0.66
NCL-202ENST00000356936 IGLV4-69A0A075B6H9 119 aa10.91□□□□□ -0.66
NCL-202ENST00000356936 IGKV2-24A0A0C4DH68 120 aa10.91□□□□□ -0.66
NCL-202ENST00000356936 MAJINQ3KP22 176 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms