RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 NUP35Q8NFH5 326 aa10.71□□□□□ -0.69
PDLIM7-201ENST00000355572 YPEL4Q96NS1 127 aa10.71□□□□□ -0.69
PDLIM7-201ENST00000355572 hDV102S1A0JD36 115 aa10.7□□□□□ -0.7
PDLIM7-201ENST00000355572 COLCA2A8K830 154 aa10.7□□□□□ -0.7
PDLIM7-201ENST00000355572 FGF6P10767 208 aa10.7□□□□□ -0.7
PDLIM7-201ENST00000355572 ESDP10768 282 aa10.7□□□□□ -0.7
PDLIM7-201ENST00000355572 BTF3L4Q96K17 158 aa10.7□□□□□ -0.7
PDLIM7-201ENST00000355572 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
PDLIM7-201ENST00000355572 APCSP02743 223 aa10.69□□□□□ -0.7
PDLIM7-201ENST00000355572 CHTF8P0CG12 524 aa10.69□□□□□ -0.7
PDLIM7-201ENST00000355572 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
PDLIM7-201ENST00000355572 SMIM15Q7Z3B0 74 aa10.69□□□□□ -0.7
PDLIM7-201ENST00000355572 IMMP2LQ96T52 175 aa10.69□□□□□ -0.7
PDLIM7-201ENST00000355572 I3L3M4 83 aa10.68□□□□□ -0.7
PDLIM7-201ENST00000355572 CNBPP62633 177 aaKnown RBP10.68□□□□□ -0.7
PDLIM7-201ENST00000355572 RNASEKQ6P5S7 137 aaKnown RBP10.68□□□□□ -0.7
PDLIM7-201ENST00000355572 NRACQ8N912 160 aa10.68□□□□□ -0.7
PDLIM7-201ENST00000355572 TMA7Q9Y2S6 64 aaKnown RBP10.68□□□□□ -0.7
PDLIM7-201ENST00000355572 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
PDLIM7-201ENST00000355572 PMCHP20382 165 aa10.67□□□□□ -0.7
PDLIM7-201ENST00000355572 S100PP25815 95 aa10.67□□□□□ -0.7
PDLIM7-201ENST00000355572 HIGD2BQ4VC39 106 aa10.67□□□□□ -0.7
PDLIM7-201ENST00000355572 CHCHD10Q8WYQ3 142 aaPredicted RBP10.67□□□□□ -0.7
PDLIM7-201ENST00000355572 TRBV24-1A0A075B6N3 115 aa10.66□□□□□ -0.7
PDLIM7-201ENST00000355572 FOXI1Q12951 378 aa10.66□□□□□ -0.7
PDLIM7-201ENST00000355572 CIRBPQ14011 172 aaKnown RBP10.66□□□□□ -0.7
PDLIM7-201ENST00000355572 AMMECR1LQ6DCA0 310 aa10.66□□□□□ -0.7
PDLIM7-201ENST00000355572 ST20Q9HBF5 79 aa10.66□□□□□ -0.7
PDLIM7-201ENST00000355572 TRAV9-1A0A075B6T8 112 aa10.65□□□□□ -0.7
PDLIM7-201ENST00000355572 RAB5AP20339 215 aa10.65□□□□□ -0.7
PDLIM7-201ENST00000355572 BORCS7Q96B45 105 aa10.65□□□□□ -0.7
PDLIM7-201ENST00000355572 TRBV27A0A0K0K1C4 114 aa10.64□□□□□ -0.71
PDLIM7-201ENST00000355572 SMIM27A0A1W2PRY6 76 aa10.64□□□□□ -0.71
PDLIM7-201ENST00000355572 KRTAP29-1A8MX34 341 aaPredicted RBP10.64□□□□□ -0.71
PDLIM7-201ENST00000355572 H7C423 109 aa10.64□□□□□ -0.71
PDLIM7-201ENST00000355572 MRPL51Q4U2R6 128 aaKnown RBP10.64□□□□□ -0.71
PDLIM7-201ENST00000355572 OR5A1Q8NGJ0 315 aa10.63□□□□□ -0.71
PDLIM7-201ENST00000355572 LINC00526Q96FQ7 95 aa10.63□□□□□ -0.71
PDLIM7-201ENST00000355572 MRAP2Q96G30 205 aa10.63□□□□□ -0.71
PDLIM7-201ENST00000355572 LINC00959A0A1B0GUT2 108 aa10.62□□□□□ -0.71
PDLIM7-201ENST00000355572 RIGQ13278 110 aa10.62□□□□□ -0.71
PDLIM7-201ENST00000355572 C1orf196B1AJZ1 125 aa10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 CCL25O15444 150 aa10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 ZNF25P17030 456 aaPredicted RBP10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 XCL1P47992 114 aa10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 RAB5BP61020 215 aa10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 RPL37AP61513 92 aaKnown RBP10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 RNASE13Q5GAN3 156 aaKnown RBP10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 FAM104BQ5XKR9 115 aa10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 PRSS3P2Q8NHM4 247 aa10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 SPACA4Q8TDM5 124 aa10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 CDC42SE2Q9NRR3 84 aa10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 NAT8BQ9UHF3 227 aa10.61□□□□□ -0.71
PDLIM7-201ENST00000355572 IGHV3-64A0A075B6Q5 118 aa10.6□□□□□ -0.71
PDLIM7-201ENST00000355572 A0A087WYN8 130 aa10.6□□□□□ -0.71
PDLIM7-201ENST00000355572 GVQW2A0A096LPI5 108 aaPredicted RBP10.6□□□□□ -0.71
PDLIM7-201ENST00000355572 J3QL48 77 aa10.6□□□□□ -0.71
PDLIM7-201ENST00000355572 CAMPP49913 170 aa10.6□□□□□ -0.71
PDLIM7-201ENST00000355572 MRPL52Q86TS9 123 aaKnown RBP10.6□□□□□ -0.71
PDLIM7-201ENST00000355572 SUMO2P61956 95 aaKnown RBP10.59□□□□□ -0.71
PDLIM7-201ENST00000355572 COX6A2Q02221 97 aa10.59□□□□□ -0.71
PDLIM7-201ENST00000355572 FAM104AQ969W3 186 aa10.59□□□□□ -0.71
PDLIM7-201ENST00000355572 AP5S1Q9NUS5 200 aa10.59□□□□□ -0.71
PDLIM7-201ENST00000355572 A0A1B0GXF2 115 aa10.58□□□□□ -0.72
PDLIM7-201ENST00000355572 MRPL54Q6P161 138 aaKnown RBP10.58□□□□□ -0.72
PDLIM7-201ENST00000355572 UBE2D4Q9Y2X8 147 aa10.58□□□□□ -0.72
PDLIM7-201ENST00000355572 TGIF2-C20orf24A0A0A6YYL0 155 aa10.57□□□□□ -0.72
PDLIM7-201ENST00000355572 ZNF664Q8N3J9 261 aa10.57□□□□□ -0.72
PDLIM7-201ENST00000355572 A0A096LNI7 61 aa10.56□□□□□ -0.72
PDLIM7-201ENST00000355572 VCYO14598 125 aa10.56□□□□□ -0.72
PDLIM7-201ENST00000355572 COX19Q49B96 90 aa10.56□□□□□ -0.72
PDLIM7-201ENST00000355572 Q6ZUT4 128 aa10.56□□□□□ -0.72
PDLIM7-201ENST00000355572 TMEM101Q96IK0 257 aa10.56□□□□□ -0.72
PDLIM7-201ENST00000355572 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.55□□□□□ -0.72
PDLIM7-201ENST00000355572 NPYP01303 97 aa10.55□□□□□ -0.72
PDLIM7-201ENST00000355572 PLAC8Q9NZF1 115 aa10.55□□□□□ -0.72
PDLIM7-201ENST00000355572 IGKV2-24A0A0C4DH68 120 aa10.54□□□□□ -0.72
PDLIM7-201ENST00000355572 LOC105371267A0A1B0GV96 52 aa10.54□□□□□ -0.72
PDLIM7-201ENST00000355572 TNFRSF6BO95407 300 aa10.54□□□□□ -0.72
PDLIM7-201ENST00000355572 FCER1GP30273 86 aa10.54□□□□□ -0.72
PDLIM7-201ENST00000355572 RPL39P62891 51 aaKnown RBP10.54□□□□□ -0.72
PDLIM7-201ENST00000355572 CFAP161Q6P656 301 aa10.54□□□□□ -0.72
PDLIM7-201ENST00000355572 D6R8Y8 96 aa10.53□□□□□ -0.72
PDLIM7-201ENST00000355572 OPRPNQ99935 248 aaPredicted RBP10.53□□□□□ -0.72
PDLIM7-201ENST00000355572 HBBP68871 147 aa10.52□□□□□ -0.73
PDLIM7-201ENST00000355572 SS18Q15532 418 aa10.52□□□□□ -0.73
PDLIM7-201ENST00000355572 CD164L2Q6UWJ8 174 aa10.52□□□□□ -0.73
PDLIM7-201ENST00000355572 IGHV1-58A0A0C4DH39 117 aa10.51□□□□□ -0.73
PDLIM7-201ENST00000355572 PHOX2AO14813 284 aa10.51□□□□□ -0.73
PDLIM7-201ENST00000355572 MT-ND6P03923 174 aa10.51□□□□□ -0.73
PDLIM7-201ENST00000355572 CKS2P33552 79 aa10.51□□□□□ -0.73
PDLIM7-201ENST00000355572 MAJINQ3KP22 176 aa10.51□□□□□ -0.73
PDLIM7-201ENST00000355572 SMIM2Q9BVW6 85 aa10.51□□□□□ -0.73
PDLIM7-201ENST00000355572 CSDC2Q9Y534 153 aaKnown RBP10.51□□□□□ -0.73
PDLIM7-201ENST00000355572 TRAV13-1A0A0B4J241 112 aa10.5□□□□□ -0.73
PDLIM7-201ENST00000355572 TCAPO15273 167 aa10.5□□□□□ -0.73
PDLIM7-201ENST00000355572 MT1HL1P0DM35 61 aa10.5□□□□□ -0.73
PDLIM7-201ENST00000355572 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
PDLIM7-201ENST00000355572 ATP5L2Q7Z4Y8 100 aa10.5□□□□□ -0.73
PDLIM7-201ENST00000355572 KIR2DL4Q99706 377 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms