RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 CSPG4Q6UVK1 2322 aa12.06□□□□□ -0.48
SHTN1-202ENST00000355371 Q6ZS46 218 aa12.06□□□□□ -0.48
SHTN1-202ENST00000355371 KIAA1549Q9HCM3 1950 aa12.06□□□□□ -0.48
SHTN1-202ENST00000355371 C4orf48Q5BLP8 95 aa12.05□□□□□ -0.48
SHTN1-202ENST00000355371 KIR2DL5BQ8NHK3 375 aa12.05□□□□□ -0.48
SHTN1-202ENST00000355371 PRR14LQ5THK1 2151 aa12.04□□□□□ -0.48
SHTN1-202ENST00000355371 CRIP2P52943 208 aaPredicted RBP12.04□□□□□ -0.48
SHTN1-202ENST00000355371 IGKV2-24A0A0C4DH68 120 aa12.04□□□□□ -0.48
SHTN1-202ENST00000355371 PTPRSQ13332 1948 aa12.04□□□□□ -0.48
SHTN1-202ENST00000355371 MRPS12O15235 138 aaKnown RBP12.04□□□□□ -0.48
SHTN1-202ENST00000355371 BBC3Q96PG8 261 aaPredicted RBP12.04□□□□□ -0.48
SHTN1-202ENST00000355371 RBX1P62877 108 aa12.04□□□□□ -0.48
SHTN1-202ENST00000355371 MRGPRG-AS1Q2M3A8 158 aa12.04□□□□□ -0.48
SHTN1-202ENST00000355371 UBE2D4Q9Y2X8 147 aa12.03□□□□□ -0.48
SHTN1-202ENST00000355371 TRIAP1O43715 76 aa12.03□□□□□ -0.48
SHTN1-202ENST00000355371 C18orf65Q6ZTR6 163 aa12.03□□□□□ -0.48
SHTN1-202ENST00000355371 CACNA1AO00555 2505 aa12.03□□□□□ -0.48
SHTN1-202ENST00000355371 CD164L2Q6UWJ8 174 aa12.03□□□□□ -0.48
SHTN1-202ENST00000355371 Q8N976 141 aa12.03□□□□□ -0.48
SHTN1-202ENST00000355371 TRAV10A0A0B4J240 114 aa12.01□□□□□ -0.49
SHTN1-202ENST00000355371 TEX49A0A1B0GTD5 131 aa12.01□□□□□ -0.49
SHTN1-202ENST00000355371 WFDC9Q8NEX5 89 aa12.01□□□□□ -0.49
SHTN1-202ENST00000355371 ATG2AQ2TAZ0 1938 aa12.01□□□□□ -0.49
SHTN1-202ENST00000355371 BPY2O14599 106 aa12.01□□□□□ -0.49
SHTN1-202ENST00000355371 FAM110AQ9BQ89 295 aa12.01□□□□□ -0.49
SHTN1-202ENST00000355371 CHKB-CPT1BH3BT56 60 aa12□□□□□ -0.49
SHTN1-202ENST00000355371 ATP5EP2Q5VTU8 51 aa12□□□□□ -0.49
SHTN1-202ENST00000355371 SYCNQ0VAF6 134 aa12□□□□□ -0.49
SHTN1-202ENST00000355371 HIGD2AQ9BW72 106 aa12□□□□□ -0.49
SHTN1-202ENST00000355371 ATRXP46100 2492 aa12□□□□□ -0.49
SHTN1-202ENST00000355371 BRI3O95415 125 aa12□□□□□ -0.49
SHTN1-202ENST00000355371 AVPP01185 164 aa11.99□□□□□ -0.49
SHTN1-202ENST00000355371 LELP1Q5T871 98 aa11.99□□□□□ -0.49
SHTN1-202ENST00000355371 C2orf91Q6ZV80 131 aa11.99□□□□□ -0.49
SHTN1-202ENST00000355371 NDUFA7O95182 113 aa11.99□□□□□ -0.49
SHTN1-202ENST00000355371 UPK3BQ9BT76 320 aa11.99□□□□□ -0.49
SHTN1-202ENST00000355371 COL5A1P20908 1838 aaPredicted RBP11.99□□□□□ -0.49
SHTN1-202ENST00000355371 J3KT08 172 aa11.98□□□□□ -0.49
SHTN1-202ENST00000355371 UBE2D1P51668 147 aa11.98□□□□□ -0.49
SHTN1-202ENST00000355371 RNF183Q96D59 192 aa11.98□□□□□ -0.49
SHTN1-202ENST00000355371 H0Y9J4 135 aa11.98□□□□□ -0.49
SHTN1-202ENST00000355371 LINC00959A0A1B0GUT2 108 aa11.97□□□□□ -0.49
SHTN1-202ENST00000355371 ZNF580Q9UK33 172 aa11.97□□□□□ -0.49
SHTN1-202ENST00000355371 UBE2D3P61077 147 aa11.97□□□□□ -0.49
SHTN1-202ENST00000355371 UBE2D2P62837 147 aa11.97□□□□□ -0.49
SHTN1-202ENST00000355371 FAM19A1Q7Z5A9 133 aa11.97□□□□□ -0.49
SHTN1-202ENST00000355371 WFDC10AQ9H1F0 79 aa11.96□□□□□ -0.49
SHTN1-202ENST00000355371 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
SHTN1-202ENST00000355371 GAS8-AS1O95177 125 aa11.96□□□□□ -0.5
SHTN1-202ENST00000355371 HCFC1P51610 2035 aa11.95□□□□□ -0.5
SHTN1-202ENST00000355371 WNK1Q9H4A3 2382 aa11.95□□□□□ -0.5
SHTN1-202ENST00000355371 C6orf99Q4VX62 202 aa11.95□□□□□ -0.5
SHTN1-202ENST00000355371 A8MZ25 164 aa11.95□□□□□ -0.5
SHTN1-202ENST00000355371 TRAV23DV6A0A075B6W5 121 aa11.95□□□□□ -0.5
SHTN1-202ENST00000355371 KPRPQ5T749 579 aaPredicted RBP11.95□□□□□ -0.5
SHTN1-202ENST00000355371 MUC7Q8TAX7 377 aa11.95□□□□□ -0.5
SHTN1-202ENST00000355371 LOC100131303A0A0U1RQF7 123 aa11.94□□□□□ -0.5
SHTN1-202ENST00000355371 SLPIP03973 132 aa11.94□□□□□ -0.5
SHTN1-202ENST00000355371 COX8CQ7Z4L0 72 aa11.94□□□□□ -0.5
SHTN1-202ENST00000355371 NAV2Q8IVL1 2488 aa11.94□□□□□ -0.5
SHTN1-202ENST00000355371 IGIPA6NJ69 53 aa11.94□□□□□ -0.5
SHTN1-202ENST00000355371 NAV3Q8IVL0 2385 aa11.94□□□□□ -0.5
SHTN1-202ENST00000355371 COX17Q14061 63 aa11.94□□□□□ -0.5
SHTN1-202ENST00000355371 PTPN13Q12923 2485 aa11.93□□□□□ -0.5
SHTN1-202ENST00000355371 PLA2G2AP14555 144 aa11.93□□□□□ -0.5
SHTN1-202ENST00000355371 MT-ATP8P03928 68 aa11.93□□□□□ -0.5
SHTN1-202ENST00000355371 NDUFV3P56181 108 aaKnown RBP11.92□□□□□ -0.5
SHTN1-202ENST00000355371 CDC42SE2Q9NRR3 84 aa11.92□□□□□ -0.5
SHTN1-202ENST00000355371 A0A087WZ39 114 aa11.92□□□□□ -0.5
SHTN1-202ENST00000355371 ODF3L2Q3SX64 289 aa11.92□□□□□ -0.5
SHTN1-202ENST00000355371 M0R378 163 aa11.92□□□□□ -0.5
SHTN1-202ENST00000355371 C5orf47Q569G3 176 aa11.91□□□□□ -0.5
SHTN1-202ENST00000355371 FAM19A5Q7Z5A7 132 aaPredicted RBP11.91□□□□□ -0.5
SHTN1-202ENST00000355371 IGLV4-69A0A075B6H9 119 aa11.91□□□□□ -0.5
SHTN1-202ENST00000355371 LST1O00453 97 aa11.91□□□□□ -0.5
SHTN1-202ENST00000355371 LINC00310P59036 64 aa11.91□□□□□ -0.5
SHTN1-202ENST00000355371 PLXNB1O43157 2135 aa11.91□□□□□ -0.5
SHTN1-202ENST00000355371 PRM2P04554 102 aa11.91□□□□□ -0.5
SHTN1-202ENST00000355371 SDIM1Q6ZPB5 146 aa11.9□□□□□ -0.5
SHTN1-202ENST00000355371 Q8IZM0 81 aa11.9□□□□□ -0.5
SHTN1-202ENST00000355371 DSCAML1Q8TD84 2053 aa11.9□□□□□ -0.5
SHTN1-202ENST00000355371 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.89□□□□□ -0.51
SHTN1-202ENST00000355371 URB1-AS1Q96HZ7 61 aa11.89□□□□□ -0.51
SHTN1-202ENST00000355371 CLUHP3Q96NS8 147 aa11.89□□□□□ -0.51
SHTN1-202ENST00000355371 UQCRQO14949 82 aa11.89□□□□□ -0.51
SHTN1-202ENST00000355371 DHRS4-AS1Q9P1J3 65 aa11.89□□□□□ -0.51
SHTN1-202ENST00000355371 EDN2P20800 178 aa11.87□□□□□ -0.51
SHTN1-202ENST00000355371 IGLV1-51P01701 117 aa11.87□□□□□ -0.51
SHTN1-202ENST00000355371 A0A1W2PPR1 153 aa11.87□□□□□ -0.51
SHTN1-202ENST00000355371 NDUFC2O95298 119 aa11.86□□□□□ -0.51
SHTN1-202ENST00000355371 ENHOQ6UWT2 76 aa11.86□□□□□ -0.51
SHTN1-202ENST00000355371 KRTAP10-9P60411 292 aa11.86□□□□□ -0.51
SHTN1-202ENST00000355371 LINC00242Q5T6M2 205 aa11.85□□□□□ -0.51
SHTN1-202ENST00000355371 SMIM11BQ8TCY0 68 aa11.85□□□□□ -0.51
SHTN1-202ENST00000355371 POM121L12Q8N7R1 296 aa11.85□□□□□ -0.51
SHTN1-202ENST00000355371 C16orf95Q9H693 158 aa11.85□□□□□ -0.51
SHTN1-202ENST00000355371 CCKP06307 115 aa11.85□□□□□ -0.51
SHTN1-202ENST00000355371 IGHV4-30-4P0DP06 118 aa11.85□□□□□ -0.51
SHTN1-202ENST00000355371 SONP18583 2426 aaKnown RBP11.85□□□□□ -0.51
SHTN1-202ENST00000355371 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms