RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
PDGFA-201ENST00000354513 IGLV10-54A0A075B6I4 117 aa10.13□□□□□ -0.79
PDGFA-201ENST00000354513 TRBV25-1A0A075B6N4 114 aa10.13□□□□□ -0.79
PDGFA-201ENST00000354513 TRAV26-2A0A0B4J265 109 aa10.13□□□□□ -0.79
PDGFA-201ENST00000354513 H7C1H1 209 aa10.13□□□□□ -0.79
PDGFA-201ENST00000354513 IGLV4-60A0A075B6I1 120 aa10.12□□□□□ -0.79
PDGFA-201ENST00000354513 IGHV1-24A0A0C4DH33 117 aa10.12□□□□□ -0.79
PDGFA-201ENST00000354513 SCO1O75880 301 aa10.12□□□□□ -0.79
PDGFA-201ENST00000354513 SLPIP03973 132 aa10.12□□□□□ -0.79
PDGFA-201ENST00000354513 REG3AQ06141 175 aa10.12□□□□□ -0.79
PDGFA-201ENST00000354513 TRBV24-1A0A075B6N3 115 aa10.11□□□□□ -0.79
PDGFA-201ENST00000354513 CNBPP62633 177 aaKnown RBP10.11□□□□□ -0.79
PDGFA-201ENST00000354513 COX19Q49B96 90 aa10.11□□□□□ -0.79
PDGFA-201ENST00000354513 MRPL51Q4U2R6 128 aaKnown RBP10.11□□□□□ -0.79
PDGFA-201ENST00000354513 TMEM136Q6ZRR5 245 aa10.11□□□□□ -0.79
PDGFA-201ENST00000354513 MRAP2Q96G30 205 aa10.11□□□□□ -0.79
PDGFA-201ENST00000354513 YPEL4Q96NS1 127 aa10.11□□□□□ -0.79
PDGFA-201ENST00000354513 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.1□□□□□ -0.79
PDGFA-201ENST00000354513 PLA2G2DQ9UNK4 145 aa10.1□□□□□ -0.79
PDGFA-201ENST00000354513 SMKR1H3BMG3 65 aa10.09□□□□□ -0.79
PDGFA-201ENST00000354513 NCR2O95944 276 aa10.09□□□□□ -0.79
PDGFA-201ENST00000354513 RPL39LQ96EH5 51 aaKnown RBP10.09□□□□□ -0.79
PDGFA-201ENST00000354513 GNB1LQ9BYB4 327 aa10.09□□□□□ -0.79
PDGFA-201ENST00000354513 NIT2Q9NQR4 276 aa10.09□□□□□ -0.79
PDGFA-201ENST00000354513 GAS8-AS1O95177 125 aa10.08□□□□□ -0.8
PDGFA-201ENST00000354513 CHTF8P0CG12 524 aa10.08□□□□□ -0.8
PDGFA-201ENST00000354513 CKS2P33552 79 aa10.08□□□□□ -0.8
PDGFA-201ENST00000354513 A0A1B0GUV1 79 aa10.07□□□□□ -0.8
PDGFA-201ENST00000354513 D6R8Y8 96 aa10.07□□□□□ -0.8
PDGFA-201ENST00000354513 APCSP02743 223 aa10.07□□□□□ -0.8
PDGFA-201ENST00000354513 MT-ND6P03923 174 aa10.07□□□□□ -0.8
PDGFA-201ENST00000354513 TMEM243Q9BU79 118 aa10.07□□□□□ -0.8
PDGFA-201ENST00000354513 hDV102S1A0JD36 115 aa10.07□□□□□ -0.8
PDGFA-201ENST00000354513 PPBPP02775 128 aa10.07□□□□□ -0.8
PDGFA-201ENST00000354513 RPS10P46783 165 aaKnown RBP10.07□□□□□ -0.8
PDGFA-201ENST00000354513 C15orf56Q8N910 161 aa10.07□□□□□ -0.8
PDGFA-201ENST00000354513 MRPL18Q9H0U6 180 aaKnown RBP10.07□□□□□ -0.8
PDGFA-201ENST00000354513 TRAPPC1Q9Y5R8 145 aa10.07□□□□□ -0.8
PDGFA-201ENST00000354513 TRAV8-4A0A0B4J246 113 aa10.06□□□□□ -0.8
PDGFA-201ENST00000354513 PPP1R17O96001 155 aa10.06□□□□□ -0.8
PDGFA-201ENST00000354513 FABP9Q0Z7S8 132 aa10.06□□□□□ -0.8
PDGFA-201ENST00000354513 KIAA1644Q3SXP7 199 aa10.06□□□□□ -0.8
PDGFA-201ENST00000354513 ORMDL3Q8N138 153 aa10.06□□□□□ -0.8
PDGFA-201ENST00000354513 SPACA4Q8TDM5 124 aa10.06□□□□□ -0.8
PDGFA-201ENST00000354513 ST20Q9HBF5 79 aa10.06□□□□□ -0.8
PDGFA-201ENST00000354513 A0A087WYN8 130 aa10.05□□□□□ -0.8
PDGFA-201ENST00000354513 COLCA2A8K830 154 aa10.05□□□□□ -0.8
PDGFA-201ENST00000354513 NRACQ8N912 160 aa10.05□□□□□ -0.8
PDGFA-201ENST00000354513 PRELID3AQ96N28 172 aa10.05□□□□□ -0.8
PDGFA-201ENST00000354513 IGHV3-64A0A075B6Q5 118 aa10.04□□□□□ -0.8
PDGFA-201ENST00000354513 TRBV6-5A0A0K0K1A5 114 aa10.04□□□□□ -0.8
PDGFA-201ENST00000354513 TNFRSF6BO95407 300 aa10.04□□□□□ -0.8
PDGFA-201ENST00000354513 SDHAF1A6NFY7 115 aa10.03□□□□□ -0.8
PDGFA-201ENST00000354513 NPYP01303 97 aa10.03□□□□□ -0.8
PDGFA-201ENST00000354513 Q6ZRU5 148 aa10.03□□□□□ -0.8
PDGFA-201ENST00000354513 PHOX2AO14813 284 aa10.02□□□□□ -0.81
PDGFA-201ENST00000354513 RAB5AP20339 215 aa10.02□□□□□ -0.81
PDGFA-201ENST00000354513 AMTP48728 403 aa10.02□□□□□ -0.81
PDGFA-201ENST00000354513 SUMO2P61956 95 aaKnown RBP10.02□□□□□ -0.81
PDGFA-201ENST00000354513 PLAC8Q9NZF1 115 aa10.02□□□□□ -0.81
PDGFA-201ENST00000354513 LAMTOR2Q9Y2Q5 125 aa10.02□□□□□ -0.81
PDGFA-201ENST00000354513 GAGE12HA6NDE8 117 aa10.01□□□□□ -0.81
PDGFA-201ENST00000354513 C20orf78Q9BR46 151 aa10.01□□□□□ -0.81
PDGFA-201ENST00000354513 PMCHP20382 165 aa10□□□□□ -0.81
PDGFA-201ENST00000354513 POLR2KP53803 58 aaKnown RBP10□□□□□ -0.81
PDGFA-201ENST00000354513 COTL1Q14019 142 aa10□□□□□ -0.81
PDGFA-201ENST00000354513 ALKBH7Q9BT30 221 aaPredicted RBP10□□□□□ -0.81
PDGFA-201ENST00000354513 AP5S1Q9NUS5 200 aa10□□□□□ -0.81
PDGFA-201ENST00000354513 LRP2P98164 4655 aa9.99□□□□□ -0.81
PDGFA-201ENST00000354513 I3L3M4 83 aa9.99□□□□□ -0.81
PDGFA-201ENST00000354513 VCYO14598 125 aa9.99□□□□□ -0.81
PDGFA-201ENST00000354513 UBE2L6O14933 153 aa9.99□□□□□ -0.81
PDGFA-201ENST00000354513 MAP1LC3AQ9H492 121 aa9.99□□□□□ -0.81
PDGFA-201ENST00000354513 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.98□□□□□ -0.81
PDGFA-201ENST00000354513 TRBV27A0A0K0K1C4 114 aa9.98□□□□□ -0.81
PDGFA-201ENST00000354513 LOC389332A0A1B0GUA5 103 aa9.98□□□□□ -0.81
PDGFA-201ENST00000354513 TRGC2P03986 189 aa9.98□□□□□ -0.81
PDGFA-201ENST00000354513 RPL32P62910 135 aaKnown RBP9.98□□□□□ -0.81
PDGFA-201ENST00000354513 COX6A2Q02221 97 aa9.98□□□□□ -0.81
PDGFA-201ENST00000354513 HIGD2BQ4VC39 106 aa9.98□□□□□ -0.81
PDGFA-201ENST00000354513 SMIM2Q9BVW6 85 aa9.98□□□□□ -0.81
PDGFA-201ENST00000354513 IGKV3OR2-268A0A0C4DH90 116 aa9.97□□□□□ -0.81
PDGFA-201ENST00000354513 PRSS3P2Q8NHM4 247 aa9.97□□□□□ -0.81
PDGFA-201ENST00000354513 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.96□□□□□ -0.82
PDGFA-201ENST00000354513 IGKV2-29A2NJV5 120 aaPredicted RBP9.96□□□□□ -0.82
PDGFA-201ENST00000354513 PRSS47A8MTI9 375 aa9.96□□□□□ -0.82
PDGFA-201ENST00000354513 TSHBP01222 138 aa9.96□□□□□ -0.82
PDGFA-201ENST00000354513 CHCHD10Q8WYQ3 142 aaPredicted RBP9.96□□□□□ -0.82
PDGFA-201ENST00000354513 KIR2DL4Q99706 377 aa9.96□□□□□ -0.82
PDGFA-201ENST00000354513 GVQW2A0A096LPI5 108 aaPredicted RBP9.95□□□□□ -0.82
PDGFA-201ENST00000354513 FCER1GP30273 86 aa9.95□□□□□ -0.82
PDGFA-201ENST00000354513 FOXI1Q12951 378 aa9.95□□□□□ -0.82
PDGFA-201ENST00000354513 ODF1Q14990 250 aa9.95□□□□□ -0.82
PDGFA-201ENST00000354513 A0A096LNI7 61 aa9.94□□□□□ -0.82
PDGFA-201ENST00000354513 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
PDGFA-201ENST00000354513 Q8N8P6 123 aa9.94□□□□□ -0.82
PDGFA-201ENST00000354513 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
PDGFA-201ENST00000354513 TCAPO15273 167 aa9.93□□□□□ -0.82
PDGFA-201ENST00000354513 FGF6P10767 208 aa9.93□□□□□ -0.82
PDGFA-201ENST00000354513 IFI27P40305 119 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms