RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 Q9H8V8 135 aa11.85□□□□□ -0.51
MBD1-204ENST00000347968 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.85□□□□□ -0.51
MBD1-204ENST00000347968 KNCNA6PVL3 124 aa11.85□□□□□ -0.51
MBD1-204ENST00000347968 LY6G5BQ8NDX9 201 aa11.85□□□□□ -0.51
MBD1-204ENST00000347968 TRAV23DV6A0A075B6W5 121 aa11.85□□□□□ -0.51
MBD1-204ENST00000347968 IGHV3-38A0A0C4DH36 116 aa11.85□□□□□ -0.51
MBD1-204ENST00000347968 IGHG2P01859 326 aa11.85□□□□□ -0.51
MBD1-204ENST00000347968 PRIMA1Q86XR5 153 aa11.84□□□□□ -0.51
MBD1-204ENST00000347968 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.84□□□□□ -0.51
MBD1-204ENST00000347968 HIVEP3Q5T1R4 2406 aa11.84□□□□□ -0.51
MBD1-204ENST00000347968 MRPS36P82909 103 aaKnown RBP11.84□□□□□ -0.51
MBD1-204ENST00000347968 PRM2P04554 102 aa11.83□□□□□ -0.52
MBD1-204ENST00000347968 C20orf197Q8N268 126 aa11.83□□□□□ -0.52
MBD1-204ENST00000347968 MALP21145 153 aa11.83□□□□□ -0.52
MBD1-204ENST00000347968 FAM110DQ8TAY7 271 aaPredicted RBP11.83□□□□□ -0.52
MBD1-204ENST00000347968 LENEPQ9Y5L5 61 aa11.83□□□□□ -0.52
MBD1-204ENST00000347968 ADORA2A-AS1P86434 159 aa11.83□□□□□ -0.52
MBD1-204ENST00000347968 PIMREGQ9BSJ6 248 aa11.82□□□□□ -0.52
MBD1-204ENST00000347968 TRBV6-5A0A0K0K1A5 114 aa11.82□□□□□ -0.52
MBD1-204ENST00000347968 A0A0U1RQV1 116 aa11.82□□□□□ -0.52
MBD1-204ENST00000347968 NCR3O14931 201 aa11.82□□□□□ -0.52
MBD1-204ENST00000347968 INAFM2P0DMQ5 153 aa11.81□□□□□ -0.52
MBD1-204ENST00000347968 SLPIP03973 132 aa11.81□□□□□ -0.52
MBD1-204ENST00000347968 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
MBD1-204ENST00000347968 ACACBO00763 2458 aa11.81□□□□□ -0.52
MBD1-204ENST00000347968 MRAPQ8TCY5 172 aa11.8□□□□□ -0.52
MBD1-204ENST00000347968 TMEM243Q9BU79 118 aa11.8□□□□□ -0.52
MBD1-204ENST00000347968 U3KQE9 123 aa11.8□□□□□ -0.52
MBD1-204ENST00000347968 CACNA1AO00555 2505 aa11.8□□□□□ -0.52
MBD1-204ENST00000347968 A0A087WYN8 130 aa11.8□□□□□ -0.52
MBD1-204ENST00000347968 GHRHP01286 108 aa11.79□□□□□ -0.52
MBD1-204ENST00000347968 COX6A2Q02221 97 aa11.79□□□□□ -0.52
MBD1-204ENST00000347968 CFAP46Q8IYW2 2715 aa11.79□□□□□ -0.52
MBD1-204ENST00000347968 SOCS3O14543 225 aa11.78□□□□□ -0.52
MBD1-204ENST00000347968 VPS13CQ709C8 3753 aa11.78□□□□□ -0.52
MBD1-204ENST00000347968 RPL28P46779 137 aaKnown RBP11.78□□□□□ -0.52
MBD1-204ENST00000347968 Q8N6K4 173 aa11.78□□□□□ -0.52
MBD1-204ENST00000347968 FAM19A1Q7Z5A9 133 aa11.78□□□□□ -0.52
MBD1-204ENST00000347968 CSMD2Q7Z408 3487 aa11.78□□□□□ -0.52
MBD1-204ENST00000347968 PRORYQ9H606 182 aa11.77□□□□□ -0.53
MBD1-204ENST00000347968 ZFYVE26Q68DK2 2539 aa11.77□□□□□ -0.53
MBD1-204ENST00000347968 IGHV3-16A0A0C4DH30 117 aa11.77□□□□□ -0.53
MBD1-204ENST00000347968 ODF3BA8MYP8 253 aa11.76□□□□□ -0.53
MBD1-204ENST00000347968 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
MBD1-204ENST00000347968 PRO0628Q9UI54 55 aa11.76□□□□□ -0.53
MBD1-204ENST00000347968 FAM236DA0A1B0GTK5 79 aa11.75□□□□□ -0.53
MBD1-204ENST00000347968 FAM236CP0DP71 79 aa11.75□□□□□ -0.53
MBD1-204ENST00000347968 LINC00467Q9BRT7 94 aa11.75□□□□□ -0.53
MBD1-204ENST00000347968 KLLNB2CW77 178 aa11.74□□□□□ -0.53
MBD1-204ENST00000347968 Q6JHZ5 121 aa11.74□□□□□ -0.53
MBD1-204ENST00000347968 IGSF10Q6WRI0 2623 aa11.74□□□□□ -0.53
MBD1-204ENST00000347968 NDUFA1O15239 70 aa11.73□□□□□ -0.53
MBD1-204ENST00000347968 RHPN1-AS1Q9BWJ2 59 aa11.73□□□□□ -0.53
MBD1-204ENST00000347968 MINOS1Q5TGZ0 78 aa11.73□□□□□ -0.53
MBD1-204ENST00000347968 UBE2D4Q9Y2X8 147 aa11.73□□□□□ -0.53
MBD1-204ENST00000347968 AVPP01185 164 aa11.72□□□□□ -0.53
MBD1-204ENST00000347968 ENHOQ6UWT2 76 aa11.72□□□□□ -0.53
MBD1-204ENST00000347968 Q6ZSN1 163 aa11.72□□□□□ -0.53
MBD1-204ENST00000347968 GNLYP22749 145 aa11.71□□□□□ -0.53
MBD1-204ENST00000347968 SNURFQ9Y675 71 aa11.71□□□□□ -0.53
MBD1-204ENST00000347968 UTP20O75691 2785 aaKnown RBP11.71□□□□□ -0.53
MBD1-204ENST00000347968 CRYBG3Q68DQ2 2970 aa11.71□□□□□ -0.53
MBD1-204ENST00000347968 RBMY1BA6NDE4 496 aaKnown RBP11.71□□□□□ -0.53
MBD1-204ENST00000347968 RBMY1EA6NEQ0 496 aaKnown RBP11.71□□□□□ -0.53
MBD1-204ENST00000347968 LECT2O14960 151 aa11.71□□□□□ -0.53
MBD1-204ENST00000347968 RBMY1DP0C7P1 496 aaKnown RBP11.71□□□□□ -0.53
MBD1-204ENST00000347968 RBMY1A1P0DJD3 496 aaKnown RBP11.71□□□□□ -0.53
MBD1-204ENST00000347968 RBMY1CP0DJD4 496 aa11.71□□□□□ -0.53
MBD1-204ENST00000347968 RBMY1FQ15415 496 aaKnown RBP11.71□□□□□ -0.53
MBD1-204ENST00000347968 C9orf85Q96MD7 179 aa11.71□□□□□ -0.53
MBD1-204ENST00000347968 LINC00474Q9P2X8 69 aa11.71□□□□□ -0.53
MBD1-204ENST00000347968 FLNCQ14315 2725 aa11.71□□□□□ -0.54
MBD1-204ENST00000347968 FAM222AQ5U5X8 452 aa11.7□□□□□ -0.54
MBD1-204ENST00000347968 LINC00337Q8N6G1 96 aa11.7□□□□□ -0.54
MBD1-204ENST00000347968 APRG1Q8IVJ8 170 aa11.7□□□□□ -0.54
MBD1-204ENST00000347968 A0A1W2PPR1 153 aa11.69□□□□□ -0.54
MBD1-204ENST00000347968 DGAT2L7PQ6IED9 249 aa11.69□□□□□ -0.54
MBD1-204ENST00000347968 BRK1Q8WUW1 75 aa11.69□□□□□ -0.54
MBD1-204ENST00000347968 TIMM17BO60830 172 aa11.69□□□□□ -0.54
MBD1-204ENST00000347968 FBXL19-AS1Q494R0 122 aa11.69□□□□□ -0.54
MBD1-204ENST00000347968 CHCHD7Q9BUK0 85 aa11.69□□□□□ -0.54
MBD1-204ENST00000347968 ZFP36P26651 326 aaKnown RBP11.68□□□□□ -0.54
MBD1-204ENST00000347968 XCL1P47992 114 aa11.68□□□□□ -0.54
MBD1-204ENST00000347968 XCL2Q9UBD3 114 aa11.68□□□□□ -0.54
MBD1-204ENST00000347968 RNASE1P07998 156 aaKnown RBP11.68□□□□□ -0.54
MBD1-204ENST00000347968 HIST2H2BCQ6DN03 193 aa11.68□□□□□ -0.54
MBD1-204ENST00000347968 HIST2H2BDQ6DRA6 164 aa11.68□□□□□ -0.54
MBD1-204ENST00000347968 TMEM86BQ8N661 226 aa11.67□□□□□ -0.54
MBD1-204ENST00000347968 CRPP02741 224 aa11.67□□□□□ -0.54
MBD1-204ENST00000347968 PRB1P04280 392 aa11.67□□□□□ -0.54
MBD1-204ENST00000347968 C19orf84I3L1E1 186 aa11.66□□□□□ -0.54
MBD1-204ENST00000347968 SMIM11BQ8TCY0 68 aa11.66□□□□□ -0.54
MBD1-204ENST00000347968 SAA4P35542 130 aa11.66□□□□□ -0.54
MBD1-204ENST00000347968 FP248Q71RG6 208 aaPredicted RBP11.66□□□□□ -0.54
MBD1-204ENST00000347968 IGHV1OR15-1A0A075B7D0 117 aa11.66□□□□□ -0.54
MBD1-204ENST00000347968 MIR7-3HGQ8N6C7 128 aa11.66□□□□□ -0.54
MBD1-204ENST00000347968 IGHV3OR16-12A0A075B7B8 117 aa11.65□□□□□ -0.54
MBD1-204ENST00000347968 ZNF415Q09FC8 603 aa11.64□□□□□ -0.55
MBD1-204ENST00000347968 SPG11Q96JI7 2443 aa11.64□□□□□ -0.55
MBD1-204ENST00000347968 RPL36AP83881 106 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms