RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 NOTCH3Q9UM47 2321 aa15.16■□□□□ 0.02
E2F1-201ENST00000343380 IGHV3OR16-12A0A075B7B8 117 aa15.16■□□□□ 0.02
E2F1-201ENST00000343380 COX6CP09669 75 aa15.16■□□□□ 0.02
E2F1-201ENST00000343380 NDUFV3P56181 108 aaKnown RBP15.16■□□□□ 0.02
E2F1-201ENST00000343380 MAP6D1Q9H9H5 199 aa15.15■□□□□ 0.02
E2F1-201ENST00000343380 FAM208BQ5VWN6 2430 aa15.15■□□□□ 0.02
E2F1-201ENST00000343380 NDUFA1O15239 70 aa15.14■□□□□ 0.01
E2F1-201ENST00000343380 LINC00694P0DN24 101 aa15.14■□□□□ 0.01
E2F1-201ENST00000343380 IGLV5-45A0A087WSX0 123 aa15.13■□□□□ 0.01
E2F1-201ENST00000343380 H3BT86 120 aa15.13■□□□□ 0.01
E2F1-201ENST00000343380 TTC32Q5I0X7 151 aa15.13■□□□□ 0.01
E2F1-201ENST00000343380 PIK3CD-AS1Q5SR53 167 aa15.13■□□□□ 0.01
E2F1-201ENST00000343380 Q6YL49 198 aa15.13■□□□□ 0.01
E2F1-201ENST00000343380 YAE1D1Q9NRH1 226 aa15.13■□□□□ 0.01
E2F1-201ENST00000343380 NIPBLQ6KC79 2804 aaeCLIP15.13■□□□□ 0.01
E2F1-201ENST00000343380 PTPN13Q12923 2485 aa15.13■□□□□ 0.01
E2F1-201ENST00000343380 TIMM17BO60830 172 aa15.13■□□□□ 0.01
E2F1-201ENST00000343380 BEAN1Q3B7T3 259 aa15.13■□□□□ 0.01
E2F1-201ENST00000343380 Q9H8V8 135 aa15.13■□□□□ 0.01
E2F1-201ENST00000343380 SS18L2Q9UHA2 77 aa15.12■□□□□ 0.01
E2F1-201ENST00000343380 TLN2Q9Y4G6 2542 aa15.12■□□□□ 0.01
E2F1-201ENST00000343380 TIRAPP58753 221 aa15.12■□□□□ 0.01
E2F1-201ENST00000343380 LINC00242Q5T6M2 205 aa15.12■□□□□ 0.01
E2F1-201ENST00000343380 EPG5Q9HCE0 2579 aa15.12■□□□□ 0.01
E2F1-201ENST00000343380 B5MCH6 92 aa15.11■□□□□ 0.01
E2F1-201ENST00000343380 DGAT2L7PQ6IED9 249 aa15.11■□□□□ 0.01
E2F1-201ENST00000343380 LINC00308Q8TCZ7 52 aa15.11■□□□□ 0.01
E2F1-201ENST00000343380 XCL2Q9UBD3 114 aa15.11■□□□□ 0.01
E2F1-201ENST00000343380 RS1O15537 224 aa15.11■□□□□ 0.01
E2F1-201ENST00000343380 IFITM1P13164 125 aa15.11■□□□□ 0.01
E2F1-201ENST00000343380 DNAJC30Q96LL9 226 aa15.11■□□□□ 0.01
E2F1-201ENST00000343380 ABCA12Q86UK0 2595 aa15.11■□□□□ 0.01
E2F1-201ENST00000343380 GAGE5Q13069 117 aa15.1■□□□□ 0.01
E2F1-201ENST00000343380 GAGE6Q13070 117 aa15.1■□□□□ 0.01
E2F1-201ENST00000343380 SOSTDC1Q6X4U4 206 aa15.1■□□□□ 0.01
E2F1-201ENST00000343380 LRRK2Q5S007 2527 aa15.1■□□□□ 0.01
E2F1-201ENST00000343380 WNK1Q9H4A3 2382 aa15.1■□□□□ 0.01
E2F1-201ENST00000343380 IGLV5-39A0A0G2JS06 123 aa15.09■□□□□ 0.01
E2F1-201ENST00000343380 DSCR9P59020 149 aa15.09■□□□□ 0.01
E2F1-201ENST00000343380 Q8N2B8 174 aa15.09■□□□□ 0.01
E2F1-201ENST00000343380 KHDC1LQ5JSQ8 128 aa15.09■□□□□ 0.01
E2F1-201ENST00000343380 NF1P21359 2839 aa15.09■□□□□ 0.01
E2F1-201ENST00000343380 CCDC179H3BU77 68 aa15.08■□□□□ 0.01
E2F1-201ENST00000343380 ZNF469Q96JG9 3925 aaPredicted RBP15.08■□□□□ 0
E2F1-201ENST00000343380 TRAV13-1A0A0B4J241 112 aa15.07■□□□□ 0
E2F1-201ENST00000343380 J3QLI3 93 aa15.07■□□□□ 0
E2F1-201ENST00000343380 FSHBP01225 129 aa15.07■□□□□ 0
E2F1-201ENST00000343380 INSP01308 110 aa15.07■□□□□ 0
E2F1-201ENST00000343380 SMIM1B2RUZ4 78 aa15.06■□□□□ 0
E2F1-201ENST00000343380 DEFB114Q30KQ6 69 aa15.06■□□□□ 0
E2F1-201ENST00000343380 NTM-AS1Q6ZSK4 140 aa15.06■□□□□ 0
E2F1-201ENST00000343380 ZFYVE26Q68DK2 2539 aa15.06■□□□□ 0
E2F1-201ENST00000343380 DEFB121Q5J5C9 76 aa15.06■□□□□ 0
E2F1-201ENST00000343380 Q6Q795 121 aa15.06■□□□□ 0
E2F1-201ENST00000343380 DYNLRB2Q8TF09 96 aa15.06■□□□□ 0
E2F1-201ENST00000343380 JMJD1CQ15652 2540 aa15.05■□□□□ 0
E2F1-201ENST00000343380 NAV2Q8IVL1 2488 aa15.05■□□□□ -0
E2F1-201ENST00000343380 TRGV1A0A0A0MS02 117 aa15.05■□□□□ -0
E2F1-201ENST00000343380 CIRBPQ14011 172 aaKnown RBP15.05■□□□□ -0
E2F1-201ENST00000343380 PEMTQ9UBM1 199 aa15.04■□□□□ -0
E2F1-201ENST00000343380 NBPF19A0A087WUL8 3843 aa15.04■□□□□ -0
E2F1-201ENST00000343380 HERVK_113P63121 156 aa15.04■□□□□ -0
E2F1-201ENST00000343380 C1orf158Q8N1D5 194 aa15.04■□□□□ -0
E2F1-201ENST00000343380 BBC3Q96PG8 261 aaPredicted RBP15.03■□□□□ -0
E2F1-201ENST00000343380 SETD2Q9BYW2 2564 aaPredicted RBP15.03■□□□□ -0
E2F1-201ENST00000343380 SONP18583 2426 aaKnown RBP15.03■□□□□ -0
E2F1-201ENST00000343380 ODF3L2Q3SX64 289 aa15.03■□□□□ -0
E2F1-201ENST00000343380 IGHV4-31P0DP07 118 aa15.02□□□□□ -0.01
E2F1-201ENST00000343380 Q6ZTI0 123 aa15.01□□□□□ -0.01
E2F1-201ENST00000343380 GAGE12JA6NER3 117 aa15.01□□□□□ -0.01
E2F1-201ENST00000343380 GAGE7O76087 117 aa15.01□□□□□ -0.01
E2F1-201ENST00000343380 GAGE12FP0CL80 117 aa15.01□□□□□ -0.01
E2F1-201ENST00000343380 GAGE12GP0CL81 117 aa15.01□□□□□ -0.01
E2F1-201ENST00000343380 GAGE12IP0CL82 117 aa15.01□□□□□ -0.01
E2F1-201ENST00000343380 GAGE4Q13068 117 aa15.01□□□□□ -0.01
E2F1-201ENST00000343380 PRIMA1Q86XR5 153 aa15.01□□□□□ -0.01
E2F1-201ENST00000343380 ZNF843Q8N446 348 aa15.01□□□□□ -0.01
E2F1-201ENST00000343380 C4orf3Q8WVX3 66 aa15.01□□□□□ -0.01
E2F1-201ENST00000343380 FAM240AA0A1B0GVK7 77 aa15□□□□□ -0.01
E2F1-201ENST00000343380 F5H768 121 aa15□□□□□ -0.01
E2F1-201ENST00000343380 SHISA2Q6UWI4 295 aa15□□□□□ -0.01
E2F1-201ENST00000343380 COX7A2LO14548 114 aa15□□□□□ -0.01
E2F1-201ENST00000343380 Q96MF0 132 aa15□□□□□ -0.01
E2F1-201ENST00000343380 SETXQ7Z333 2677 aaKnown RBP14.99□□□□□ -0.01
E2F1-201ENST00000343380 PRB1P04280 392 aa14.99□□□□□ -0.01
E2F1-201ENST00000343380 MEIG1Q5JSS6 88 aa14.99□□□□□ -0.01
E2F1-201ENST00000343380 IL17DQ8TAD2 202 aa14.99□□□□□ -0.01
E2F1-201ENST00000343380 CR1P17927 2039 aa14.98□□□□□ -0.01
E2F1-201ENST00000343380 CDC42SE2Q9NRR3 84 aa14.98□□□□□ -0.01
E2F1-201ENST00000343380 ZNF462Q96JM2 2506 aa14.97□□□□□ -0.01
E2F1-201ENST00000343380 FAM19A3Q7Z5A8 133 aa14.97□□□□□ -0.01
E2F1-201ENST00000343380 FAM218AQ96MZ4 157 aa14.97□□□□□ -0.01
E2F1-201ENST00000343380 C11orf44Q8N8P7 122 aa14.97□□□□□ -0.01
E2F1-201ENST00000343380 K7EQD1 137 aa14.96□□□□□ -0.01
E2F1-201ENST00000343380 RPL36AP83881 106 aaKnown RBP14.96□□□□□ -0.01
E2F1-201ENST00000343380 RPL36ALQ969Q0 106 aaKnown RBP14.96□□□□□ -0.01
E2F1-201ENST00000343380 MRPL23Q16540 153 aaKnown RBP14.96□□□□□ -0.02
E2F1-201ENST00000343380 C22orf24Q9Y442 160 aa14.96□□□□□ -0.02
E2F1-201ENST00000343380 STHQ8IWL8 128 aa14.95□□□□□ -0.02
E2F1-201ENST00000343380 KRTAP10-9P60411 292 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms