RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 DSCR8Q96T75 97 aa9.27□□□□□ -0.93
LIN54-201ENST00000340417 NAA38Q9BRA0 125 aaKnown RBP9.27□□□□□ -0.93
LIN54-201ENST00000340417 IGLV2-8P01709 118 aa9.27□□□□□ -0.93
LIN54-201ENST00000340417 BVES-AS1Q5T3Y7 98 aa9.27□□□□□ -0.93
LIN54-201ENST00000340417 C10orf91Q5T1B1 145 aa9.26□□□□□ -0.93
LIN54-201ENST00000340417 FAM19A1Q7Z5A9 133 aa9.26□□□□□ -0.93
LIN54-201ENST00000340417 LINC00474Q9P2X8 69 aa9.25□□□□□ -0.93
LIN54-201ENST00000340417 MIR7-3HGQ8N6C7 128 aa9.25□□□□□ -0.93
LIN54-201ENST00000340417 DAND5Q8N907 189 aa9.25□□□□□ -0.93
LIN54-201ENST00000340417 A0A096LNT2 108 aa9.25□□□□□ -0.93
LIN54-201ENST00000340417 TRAV12-1A0A0B4J245 112 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 DIRC1Q969H9 104 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 LOC107984640A0A0U1RRK4 108 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 TINCRA0A1B0GVN0 87 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 IGLV2-11P01706 119 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 C11orf21Q9P2W6 132 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 IFITM1P13164 125 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 RNASE8Q8TDE3 154 aaKnown RBP9.24□□□□□ -0.93
LIN54-201ENST00000340417 CHD7Q9P2D1 2997 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 SOCS3O14543 225 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 MPV17L2Q567V2 206 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 RBMY1FQ15415 496 aaKnown RBP9.24□□□□□ -0.93
LIN54-201ENST00000340417 CD164L2Q6UWJ8 174 aa9.24□□□□□ -0.93
LIN54-201ENST00000340417 IGLV4-69A0A075B6H9 119 aa9.23□□□□□ -0.93
LIN54-201ENST00000340417 PIK3CD-AS1Q5SR53 167 aa9.23□□□□□ -0.93
LIN54-201ENST00000340417 PRO1854Q9UHT4 67 aa9.23□□□□□ -0.93
LIN54-201ENST00000340417 HTTP42858 3142 aa9.23□□□□□ -0.93
LIN54-201ENST00000340417 UBE2D3P61077 147 aa9.23□□□□□ -0.93
LIN54-201ENST00000340417 UBE2D2P62837 147 aa9.23□□□□□ -0.93
LIN54-201ENST00000340417 C11orf86A6NJI1 115 aa9.22□□□□□ -0.93
LIN54-201ENST00000340417 FHL2Q14192 279 aa9.22□□□□□ -0.93
LIN54-201ENST00000340417 C9JAW5 83 aa9.22□□□□□ -0.93
LIN54-201ENST00000340417 GAGE2AQ6NT46 116 aa9.22□□□□□ -0.93
LIN54-201ENST00000340417 KRTAP1-3Q8IUG1 177 aa9.22□□□□□ -0.93
LIN54-201ENST00000340417 CHCHD7Q9BUK0 85 aa9.22□□□□□ -0.93
LIN54-201ENST00000340417 MRPS12O15235 138 aaKnown RBP9.22□□□□□ -0.93
LIN54-201ENST00000340417 LINC00526Q96FQ7 95 aa9.22□□□□□ -0.93
LIN54-201ENST00000340417 POM121L12Q8N7R1 296 aa9.21□□□□□ -0.93
LIN54-201ENST00000340417 CELA1Q9UNI1 258 aa9.21□□□□□ -0.93
LIN54-201ENST00000340417 WFDC9Q8NEX5 89 aa9.21□□□□□ -0.94
LIN54-201ENST00000340417 COX8AP10176 69 aa9.21□□□□□ -0.94
LIN54-201ENST00000340417 COL27A1Q8IZC6 1860 aaPredicted RBP9.21□□□□□ -0.94
LIN54-201ENST00000340417 XAGE1AQ9HD64 81 aa9.2□□□□□ -0.94
LIN54-201ENST00000340417 NDUFS5O43920 106 aa9.2□□□□□ -0.94
LIN54-201ENST00000340417 HIST1H4AP62805 103 aaKnown RBP9.2□□□□□ -0.94
LIN54-201ENST00000340417 LINC00959A0A1B0GUT2 108 aa9.2□□□□□ -0.94
LIN54-201ENST00000340417 IGLV4-3A0A075B6K6 122 aa9.19□□□□□ -0.94
LIN54-201ENST00000340417 C12orf74Q32Q52 190 aa9.19□□□□□ -0.94
LIN54-201ENST00000340417 Q6ZVH6 145 aa9.19□□□□□ -0.94
LIN54-201ENST00000340417 ORMDL1Q9P0S3 153 aa9.19□□□□□ -0.94
LIN54-201ENST00000340417 TRBV6-5A0A0K0K1A5 114 aa9.18□□□□□ -0.94
LIN54-201ENST00000340417 FUSP35637 526 aaKnown RBP eCLIP9.18□□□□□ -0.94
LIN54-201ENST00000340417 LYPD5Q6UWN5 251 aa9.18□□□□□ -0.94
LIN54-201ENST00000340417 CEND1Q8N111 149 aa9.18□□□□□ -0.94
LIN54-201ENST00000340417 CDKN2A-AS1Q9UH64 79 aa9.18□□□□□ -0.94
LIN54-201ENST00000340417 INAFM2P0DMQ5 153 aa9.18□□□□□ -0.94
LIN54-201ENST00000340417 hADV29S1A0JD25 119 aa9.18□□□□□ -0.94
LIN54-201ENST00000340417 LINC00173Q6ZV60 143 aa9.18□□□□□ -0.94
LIN54-201ENST00000340417 MUSTN1Q8IVN3 82 aa9.18□□□□□ -0.94
LIN54-201ENST00000340417 A0A1B0GXF2 115 aa9.18□□□□□ -0.94
LIN54-201ENST00000340417 HELZ2Q9BYK8 2649 aaKnown RBP9.17□□□□□ -0.94
LIN54-201ENST00000340417 COX7BP24311 80 aa9.17□□□□□ -0.94
LIN54-201ENST00000340417 WFDC10BQ8IUB3 73 aa9.17□□□□□ -0.94
LIN54-201ENST00000340417 TRBV27A0A0K0K1C4 114 aa9.17□□□□□ -0.94
LIN54-201ENST00000340417 TSHBP01222 138 aa9.16□□□□□ -0.94
LIN54-201ENST00000340417 A0A096LNI7 61 aa9.16□□□□□ -0.94
LIN54-201ENST00000340417 RANBP2P49792 3224 aaKnown RBP9.16□□□□□ -0.94
LIN54-201ENST00000340417 K7EIL1 84 aa9.16□□□□□ -0.94
LIN54-201ENST00000340417 PCP2Q8IVA1 136 aa9.16□□□□□ -0.94
LIN54-201ENST00000340417 LINC01545Q5VT33 79 aa9.15□□□□□ -0.94
LIN54-201ENST00000340417 USP17L23D6RBM5 183 aa9.15□□□□□ -0.94
LIN54-201ENST00000340417 H0YGX0 51 aa9.15□□□□□ -0.94
LIN54-201ENST00000340417 C3orf84H3BNL1 204 aa9.15□□□□□ -0.95
LIN54-201ENST00000340417 RNF185Q96GF1 192 aa9.15□□□□□ -0.95
LIN54-201ENST00000340417 E9PLD3 99 aa9.14□□□□□ -0.95
LIN54-201ENST00000340417 CHD9Q3L8U1 2897 aa9.14□□□□□ -0.95
LIN54-201ENST00000340417 KRTAP1-1Q07627 177 aa9.14□□□□□ -0.95
LIN54-201ENST00000340417 NDUFB1O75438 58 aa9.13□□□□□ -0.95
LIN54-201ENST00000340417 HAMPP81172 84 aa9.13□□□□□ -0.95
LIN54-201ENST00000340417 TRBV20-1A0A075B6N2 111 aa9.13□□□□□ -0.95
LIN54-201ENST00000340417 CFC1BP0CG36 223 aa9.13□□□□□ -0.95
LIN54-201ENST00000340417 CFC1P0CG37 223 aa9.13□□□□□ -0.95
LIN54-201ENST00000340417 C6orf223Q8N319 242 aa9.13□□□□□ -0.95
LIN54-201ENST00000340417 ZNF706Q9Y5V0 76 aaPredicted RBP9.13□□□□□ -0.95
LIN54-201ENST00000340417 PYY3Q5JQD4 70 aa9.13□□□□□ -0.95
LIN54-201ENST00000340417 UBE2D4Q9Y2X8 147 aa9.13□□□□□ -0.95
LIN54-201ENST00000340417 UBL5Q9BZL1 73 aa9.13□□□□□ -0.95
LIN54-201ENST00000340417 PYGO1Q9Y3Y4 419 aa9.12□□□□□ -0.95
LIN54-201ENST00000340417 NPSP0C0P6 89 aa9.12□□□□□ -0.95
LIN54-201ENST00000340417 KRTAP10-11P60412 298 aa9.12□□□□□ -0.95
LIN54-201ENST00000340417 IGKV2-28A0A075B6P5 120 aa9.12□□□□□ -0.95
LIN54-201ENST00000340417 A0A1B0GV90 55 aa9.12□□□□□ -0.95
LIN54-201ENST00000340417 IGKV2D-28P01615 120 aa9.12□□□□□ -0.95
LIN54-201ENST00000340417 IGKV2D-26A0A0A0MRZ7 120 aa9.12□□□□□ -0.95
LIN54-201ENST00000340417 PLAC8L1A1L4L8 177 aa9.12□□□□□ -0.95
LIN54-201ENST00000340417 ODF1Q14990 250 aa9.12□□□□□ -0.95
LIN54-201ENST00000340417 C5orf42Q9H799 3197 aa9.11□□□□□ -0.95
LIN54-201ENST00000340417 FOXI1Q12951 378 aa9.11□□□□□ -0.95
LIN54-201ENST00000340417 A4D1N5 150 aa9.11□□□□□ -0.95
LIN54-201ENST00000340417 IBA57-AS1B1ANH7 110 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms