RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 REG3AQ06141 175 aa7.99□□□□□ -1.13
SPTLC1-202ENST00000337841 PRR34Q9NV39 138 aa7.99□□□□□ -1.13
SPTLC1-202ENST00000337841 CSDC2Q9Y534 153 aaKnown RBP7.99□□□□□ -1.13
SPTLC1-202ENST00000337841 RYR2Q92736 4967 aa7.98□□□□□ -1.13
SPTLC1-202ENST00000337841 IGKV2D-24A0A075B6R9 120 aa7.98□□□□□ -1.13
SPTLC1-202ENST00000337841 TRAV8-4A0A0B4J246 113 aa7.98□□□□□ -1.13
SPTLC1-202ENST00000337841 PRSS29PA6NIE9 313 aa7.98□□□□□ -1.13
SPTLC1-202ENST00000337841 TRGC2P03986 189 aa7.98□□□□□ -1.13
SPTLC1-202ENST00000337841 ZNF664Q8N3J9 261 aa7.98□□□□□ -1.13
SPTLC1-202ENST00000337841 C1orf43Q9BWL3 253 aa7.98□□□□□ -1.13
SPTLC1-202ENST00000337841 SPANXA1Q9NS26 97 aa7.98□□□□□ -1.13
SPTLC1-202ENST00000337841 CYSLTR1Q9Y271 337 aa7.98□□□□□ -1.13
SPTLC1-202ENST00000337841 UBE2D4Q9Y2X8 147 aa7.98□□□□□ -1.13
SPTLC1-202ENST00000337841 LINC00614P0C842 121 aa7.97□□□□□ -1.13
SPTLC1-202ENST00000337841 RPL39P62891 51 aaKnown RBP7.97□□□□□ -1.13
SPTLC1-202ENST00000337841 Q6ZRN7 208 aaPredicted RBP7.97□□□□□ -1.13
SPTLC1-202ENST00000337841 C18orf32Q8TCD1 76 aa7.97□□□□□ -1.13
SPTLC1-202ENST00000337841 CDC42SE2Q9NRR3 84 aa7.97□□□□□ -1.13
SPTLC1-202ENST00000337841 IGKV3OR2-268A0A0C4DH90 116 aa7.96□□□□□ -1.14
SPTLC1-202ENST00000337841 LINC01546A6NGU7 62 aa7.96□□□□□ -1.14
SPTLC1-202ENST00000337841 LINC01549A6NIU2 74 aa7.96□□□□□ -1.14
SPTLC1-202ENST00000337841 CLPSL2Q6UWE3 100 aa7.96□□□□□ -1.14
SPTLC1-202ENST00000337841 C2orf66Q6UXQ4 117 aa7.96□□□□□ -1.14
SPTLC1-202ENST00000337841 PYGO1Q9Y3Y4 419 aa7.96□□□□□ -1.14
SPTLC1-202ENST00000337841 GHRHP01286 108 aa7.95□□□□□ -1.14
SPTLC1-202ENST00000337841 SS18Q15532 418 aa7.95□□□□□ -1.14
SPTLC1-202ENST00000337841 AP5S1Q9NUS5 200 aa7.95□□□□□ -1.14
SPTLC1-202ENST00000337841 HYDINQ4G0P3 5121 aa7.94□□□□□ -1.14
SPTLC1-202ENST00000337841 CCL25O15444 150 aa7.94□□□□□ -1.14
SPTLC1-202ENST00000337841 MRPS36P82909 103 aaKnown RBP7.94□□□□□ -1.14
SPTLC1-202ENST00000337841 BAGE3Q86Y29 109 aa7.94□□□□□ -1.14
SPTLC1-202ENST00000337841 IGLV10-54A0A075B6I4 117 aa7.93□□□□□ -1.14
SPTLC1-202ENST00000337841 LINC00959A0A1B0GUT2 108 aa7.93□□□□□ -1.14
SPTLC1-202ENST00000337841 NPSP0C0P6 89 aa7.93□□□□□ -1.14
SPTLC1-202ENST00000337841 PAPPA-AS1Q5QFB9 102 aa7.93□□□□□ -1.14
SPTLC1-202ENST00000337841 Q6ZN92 141 aa7.93□□□□□ -1.14
SPTLC1-202ENST00000337841 TOMM6Q96B49 74 aa7.93□□□□□ -1.14
SPTLC1-202ENST00000337841 SCGB3A1Q96QR1 104 aa7.93□□□□□ -1.14
SPTLC1-202ENST00000337841 DNAH6Q9C0G6 4158 aa7.93□□□□□ -1.14
SPTLC1-202ENST00000337841 KMT2AQ03164 3969 aa7.93□□□□□ -1.14
SPTLC1-202ENST00000337841 C1orf196B1AJZ1 125 aa7.92□□□□□ -1.14
SPTLC1-202ENST00000337841 ERASQ7Z444 233 aa7.92□□□□□ -1.14
SPTLC1-202ENST00000337841 BAALCQ8WXS3 180 aa7.92□□□□□ -1.14
SPTLC1-202ENST00000337841 CHCHD1Q96BP2 118 aaKnown RBP7.92□□□□□ -1.14
SPTLC1-202ENST00000337841 TMEM141Q96I45 108 aa7.92□□□□□ -1.14
SPTLC1-202ENST00000337841 OPRPNQ99935 248 aaPredicted RBP7.92□□□□□ -1.14
SPTLC1-202ENST00000337841 VCX2Q9H322 139 aa7.92□□□□□ -1.14
SPTLC1-202ENST00000337841 RYR3Q15413 4870 aa7.92□□□□□ -1.14
SPTLC1-202ENST00000337841 A0A087WTM6 91 aa7.91□□□□□ -1.14
SPTLC1-202ENST00000337841 GAGE12HA6NDE8 117 aa7.91□□□□□ -1.14
SPTLC1-202ENST00000337841 IGIPA6NJ69 53 aa7.91□□□□□ -1.14
SPTLC1-202ENST00000337841 RNASE13Q5GAN3 156 aaKnown RBP7.91□□□□□ -1.14
SPTLC1-202ENST00000337841 Q6ZUT4 128 aa7.91□□□□□ -1.14
SPTLC1-202ENST00000337841 CHCHD10Q8WYQ3 142 aaPredicted RBP7.91□□□□□ -1.14
SPTLC1-202ENST00000337841 URB1-AS1Q96HZ7 61 aa7.91□□□□□ -1.14
SPTLC1-202ENST00000337841 IGLV4-3A0A075B6K6 122 aa7.9□□□□□ -1.14
SPTLC1-202ENST00000337841 TRAV13-1A0A0B4J241 112 aa7.9□□□□□ -1.14
SPTLC1-202ENST00000337841 TEX43Q6ZNM6 134 aa7.9□□□□□ -1.14
SPTLC1-202ENST00000337841 MAPKAPK5-AS1Q8N8E1 139 aa7.9□□□□□ -1.14
SPTLC1-202ENST00000337841 TIMM17AQ99595 171 aa7.9□□□□□ -1.14
SPTLC1-202ENST00000337841 C2orf88Q9BSF0 95 aa7.9□□□□□ -1.14
SPTLC1-202ENST00000337841 LRCOL1A6NCL2 159 aa7.89□□□□□ -1.15
SPTLC1-202ENST00000337841 IFITM10A6NMD0 228 aa7.89□□□□□ -1.15
SPTLC1-202ENST00000337841 HSBP1O75506 76 aa7.89□□□□□ -1.15
SPTLC1-202ENST00000337841 HBDP02042 147 aa7.89□□□□□ -1.15
SPTLC1-202ENST00000337841 XCL1P47992 114 aa7.89□□□□□ -1.15
SPTLC1-202ENST00000337841 C14orf177Q52M58 125 aa7.89□□□□□ -1.15
SPTLC1-202ENST00000337841 CFAP161Q6P656 301 aa7.89□□□□□ -1.15
SPTLC1-202ENST00000337841 KRTAP26-1Q6PEX3 210 aa7.89□□□□□ -1.15
SPTLC1-202ENST00000337841 CD164L2Q6UWJ8 174 aa7.89□□□□□ -1.15
SPTLC1-202ENST00000337841 FAM104AQ969W3 186 aa7.89□□□□□ -1.15
SPTLC1-202ENST00000337841 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.88□□□□□ -1.15
SPTLC1-202ENST00000337841 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
SPTLC1-202ENST00000337841 LECT2O14960 151 aa7.87□□□□□ -1.15
SPTLC1-202ENST00000337841 ATP5LO75964 103 aa7.87□□□□□ -1.15
SPTLC1-202ENST00000337841 PMCHL1Q16048 86 aa7.87□□□□□ -1.15
SPTLC1-202ENST00000337841 AMELXQ99217 191 aa7.87□□□□□ -1.15
SPTLC1-202ENST00000337841 USP17L23D6RBM5 183 aa7.86□□□□□ -1.15
SPTLC1-202ENST00000337841 SERF1AO75920 110 aa7.86□□□□□ -1.15
SPTLC1-202ENST00000337841 FOXI1Q12951 378 aa7.86□□□□□ -1.15
SPTLC1-202ENST00000337841 SPATA12Q7Z6I5 190 aa7.86□□□□□ -1.15
SPTLC1-202ENST00000337841 Q8N814 137 aa7.86□□□□□ -1.15
SPTLC1-202ENST00000337841 A0A096LNJ9 63 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 COX7A2LO14548 114 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST1H2BKO60814 126 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST1H2BJP06899 126 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 MALP21145 153 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST1H2BOP23527 126 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST1H2BBP33778 126 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST1H2BDP58876 126 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST1H2BCP62807 126 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 SEC11AP67812 179 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 PMVKQ15126 192 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST2H2BEQ16778 126 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 PDZD11Q5EBL8 140 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 NTN5Q8WTR8 489 aaPredicted RBP7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST1H2BHQ93079 126 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST1H2BNQ99877 126 aa7.85□□□□□ -1.15
SPTLC1-202ENST00000337841 HIST1H2BMQ99879 126 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms