RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 MIAQ16674 131 aa12.95□□□□□ -0.34
UBE2E2-201ENST00000335798 FA2HQ7L5A8 372 aa12.95□□□□□ -0.34
UBE2E2-201ENST00000335798 ZNF664Q8N3J9 261 aa12.95□□□□□ -0.34
UBE2E2-201ENST00000335798 CYSLTR1Q9Y271 337 aa12.95□□□□□ -0.34
UBE2E2-201ENST00000335798 PYGO1Q9Y3Y4 419 aa12.95□□□□□ -0.34
UBE2E2-201ENST00000335798 LINC00614P0C842 121 aa12.94□□□□□ -0.34
UBE2E2-201ENST00000335798 Q6ZUT4 128 aa12.94□□□□□ -0.34
UBE2E2-201ENST00000335798 AP5S1Q9NUS5 200 aa12.94□□□□□ -0.34
UBE2E2-201ENST00000335798 FAT2Q9NYQ8 4349 aa12.94□□□□□ -0.34
UBE2E2-201ENST00000335798 A0A096LNJ9 63 aa12.93□□□□□ -0.34
UBE2E2-201ENST00000335798 MRPS36P82909 103 aaKnown RBP12.93□□□□□ -0.34
UBE2E2-201ENST00000335798 KRTAP26-1Q6PEX3 210 aa12.93□□□□□ -0.34
UBE2E2-201ENST00000335798 LINC00336Q6ZUF6 198 aa12.93□□□□□ -0.34
UBE2E2-201ENST00000335798 TOMM6Q96B49 74 aa12.93□□□□□ -0.34
UBE2E2-201ENST00000335798 IGIPA6NJ69 53 aa12.92□□□□□ -0.34
UBE2E2-201ENST00000335798 DGAT2L7PQ6IED9 249 aa12.92□□□□□ -0.34
UBE2E2-201ENST00000335798 G0S2P27469 103 aa12.91□□□□□ -0.34
UBE2E2-201ENST00000335798 RAB5BP61020 215 aa12.91□□□□□ -0.34
UBE2E2-201ENST00000335798 TNP2Q05952 138 aa12.91□□□□□ -0.34
UBE2E2-201ENST00000335798 MAPKAPK5-AS1Q8N8E1 139 aa12.91□□□□□ -0.34
UBE2E2-201ENST00000335798 RMI2Q96E14 147 aa12.91□□□□□ -0.34
UBE2E2-201ENST00000335798 OPRPNQ99935 248 aaPredicted RBP12.91□□□□□ -0.34
UBE2E2-201ENST00000335798 C1orf43Q9BWL3 253 aa12.91□□□□□ -0.34
UBE2E2-201ENST00000335798 IGLV4-3A0A075B6K6 122 aa12.9□□□□□ -0.34
UBE2E2-201ENST00000335798 IGKV2D-24A0A075B6R9 120 aa12.9□□□□□ -0.34
UBE2E2-201ENST00000335798 TRAV8-4A0A0B4J246 113 aa12.9□□□□□ -0.34
UBE2E2-201ENST00000335798 PRSS29PA6NIE9 313 aa12.9□□□□□ -0.34
UBE2E2-201ENST00000335798 LINC00310P59036 64 aa12.9□□□□□ -0.34
UBE2E2-201ENST00000335798 RNASE13Q5GAN3 156 aaKnown RBP12.9□□□□□ -0.34
UBE2E2-201ENST00000335798 TM2D2Q9BX73 214 aa12.9□□□□□ -0.34
UBE2E2-201ENST00000335798 NPSP0C0P6 89 aa12.89□□□□□ -0.35
UBE2E2-201ENST00000335798 CHCHD1Q96BP2 118 aaKnown RBP12.89□□□□□ -0.35
UBE2E2-201ENST00000335798 COX11Q9Y6N1 276 aa12.89□□□□□ -0.35
UBE2E2-201ENST00000335798 IGLV10-54A0A075B6I4 117 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST1H2BKO60814 126 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST1H2BJP06899 126 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST1H2BOP23527 126 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST1H2BBP33778 126 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST1H2BDP58876 126 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST1H2BCP62807 126 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST2H2BEQ16778 126 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST1H2BHQ93079 126 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 TIMM17AQ99595 171 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST1H2BNQ99877 126 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 HIST1H2BMQ99879 126 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 IGKV3OR2-268A0A0C4DH90 116 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 LINC00959A0A1B0GUT2 108 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 LRCOL1A6NCL2 159 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 LINC01549A6NIU2 74 aa12.88□□□□□ -0.35
UBE2E2-201ENST00000335798 PSCAO43653 123 aa12.87□□□□□ -0.35
UBE2E2-201ENST00000335798 PMCHL1Q16048 86 aa12.87□□□□□ -0.35
UBE2E2-201ENST00000335798 LINC00173Q6ZV60 143 aa12.87□□□□□ -0.35
UBE2E2-201ENST00000335798 ERASQ7Z444 233 aa12.87□□□□□ -0.35
UBE2E2-201ENST00000335798 BAGE3Q86Y29 109 aa12.87□□□□□ -0.35
UBE2E2-201ENST00000335798 TMEM141Q96I45 108 aa12.87□□□□□ -0.35
UBE2E2-201ENST00000335798 A0A1B0GVY2 172 aa12.86□□□□□ -0.35
UBE2E2-201ENST00000335798 HBDP02042 147 aa12.86□□□□□ -0.35
UBE2E2-201ENST00000335798 AMELXQ99217 191 aa12.86□□□□□ -0.35
UBE2E2-201ENST00000335798 A0A087WTM6 91 aa12.85□□□□□ -0.35
UBE2E2-201ENST00000335798 SERF1AO75920 110 aa12.85□□□□□ -0.35
UBE2E2-201ENST00000335798 WFDC2Q14508 124 aa12.85□□□□□ -0.35
UBE2E2-201ENST00000335798 PDZD11Q5EBL8 140 aa12.85□□□□□ -0.35
UBE2E2-201ENST00000335798 CHCHD10Q8WYQ3 142 aaPredicted RBP12.85□□□□□ -0.35
UBE2E2-201ENST00000335798 SCGB3A1Q96QR1 104 aa12.84□□□□□ -0.35
UBE2E2-201ENST00000335798 PKD1P98161 4303 aa12.84□□□□□ -0.35
UBE2E2-201ENST00000335798 CCL25O15444 150 aa12.83□□□□□ -0.36
UBE2E2-201ENST00000335798 NUPR1O60356 82 aa12.83□□□□□ -0.36
UBE2E2-201ENST00000335798 ZC2HC1BQ5TFG8 222 aa12.83□□□□□ -0.36
UBE2E2-201ENST00000335798 TRAV13-1A0A0B4J241 112 aa12.82□□□□□ -0.36
UBE2E2-201ENST00000335798 C1orf196B1AJZ1 125 aa12.82□□□□□ -0.36
UBE2E2-201ENST00000335798 SS18Q15532 418 aa12.82□□□□□ -0.36
UBE2E2-201ENST00000335798 TEX43Q6ZNM6 134 aa12.82□□□□□ -0.36
UBE2E2-201ENST00000335798 BAALCQ8WXS3 180 aa12.82□□□□□ -0.36
UBE2E2-201ENST00000335798 GAGE12HA6NDE8 117 aa12.81□□□□□ -0.36
UBE2E2-201ENST00000335798 IFITM10A6NMD0 228 aa12.81□□□□□ -0.36
UBE2E2-201ENST00000335798 HSBP1O75506 76 aa12.81□□□□□ -0.36
UBE2E2-201ENST00000335798 FOXI1Q12951 378 aa12.81□□□□□ -0.36
UBE2E2-201ENST00000335798 Q6ZN92 141 aa12.81□□□□□ -0.36
UBE2E2-201ENST00000335798 XCL1P47992 114 aa12.8□□□□□ -0.36
UBE2E2-201ENST00000335798 PAPPA-AS1Q5QFB9 102 aa12.8□□□□□ -0.36
UBE2E2-201ENST00000335798 FAM19A2Q8N3H0 131 aa12.8□□□□□ -0.36
UBE2E2-201ENST00000335798 VCX2Q9H322 139 aa12.8□□□□□ -0.36
UBE2E2-201ENST00000335798 UBE2D1P51668 147 aa12.79□□□□□ -0.36
UBE2E2-201ENST00000335798 CD164L2Q6UWJ8 174 aa12.79□□□□□ -0.36
UBE2E2-201ENST00000335798 DNAH11Q96DT5 4516 aa12.78□□□□□ -0.36
UBE2E2-201ENST00000335798 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.78□□□□□ -0.36
UBE2E2-201ENST00000335798 LECT2O14960 151 aa12.78□□□□□ -0.36
UBE2E2-201ENST00000335798 COA6Q5JTJ3 125 aaKnown RBP12.78□□□□□ -0.36
UBE2E2-201ENST00000335798 FAM19A3Q7Z5A8 133 aa12.78□□□□□ -0.36
UBE2E2-201ENST00000335798 C2orf88Q9BSF0 95 aa12.78□□□□□ -0.36
UBE2E2-201ENST00000335798 HECTD4Q9Y4D8 3996 aa12.78□□□□□ -0.36
UBE2E2-201ENST00000335798 LINC00242Q5T6M2 205 aa12.77□□□□□ -0.37
UBE2E2-201ENST00000335798 Q8N814 137 aa12.77□□□□□ -0.37
UBE2E2-201ENST00000335798 IGHV3OR16-9A0A0B4J2B5 98 aa12.76□□□□□ -0.37
UBE2E2-201ENST00000335798 USP17L23D6RBM5 183 aa12.76□□□□□ -0.37
UBE2E2-201ENST00000335798 ATP5LO75964 103 aa12.76□□□□□ -0.37
UBE2E2-201ENST00000335798 CST9LQ9H4G1 147 aa12.75□□□□□ -0.37
UBE2E2-201ENST00000335798 KRTAP10-2P60368 255 aa12.74□□□□□ -0.37
UBE2E2-201ENST00000335798 COX6A2Q02221 97 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms