RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 DSCR8Q96T75 97 aa12.15□□□□□ -0.46
CDC42EP4-201ENST00000335793 TRAV8-3A0A0A6YYJ7 113 aa12.15□□□□□ -0.46
CDC42EP4-201ENST00000335793 CFHR3Q02985 330 aa12.15□□□□□ -0.46
CDC42EP4-201ENST00000335793 ATXN8Q156A1 80 aa12.15□□□□□ -0.46
CDC42EP4-201ENST00000335793 Q6ZSV7 163 aa12.15□□□□□ -0.46
CDC42EP4-201ENST00000335793 TIMM21Q9BVV7 248 aa12.15□□□□□ -0.46
CDC42EP4-201ENST00000335793 TENM4Q6N022 2769 aa12.14□□□□□ -0.47
CDC42EP4-201ENST00000335793 PRRC2AP48634 2157 aaKnown RBP12.14□□□□□ -0.47
CDC42EP4-201ENST00000335793 POM121L12Q8N7R1 296 aa12.14□□□□□ -0.47
CDC42EP4-201ENST00000335793 JMJD1CQ15652 2540 aa12.14□□□□□ -0.47
CDC42EP4-201ENST00000335793 LEPROTO15243 131 aa12.14□□□□□ -0.47
CDC42EP4-201ENST00000335793 DYNLRB2Q8TF09 96 aa12.14□□□□□ -0.47
CDC42EP4-201ENST00000335793 IGLV4-3A0A075B6K6 122 aa12.13□□□□□ -0.47
CDC42EP4-201ENST00000335793 C11orf44Q8N8P7 122 aa12.13□□□□□ -0.47
CDC42EP4-201ENST00000335793 TMEM223A0PJW6 202 aa12.13□□□□□ -0.47
CDC42EP4-201ENST00000335793 C18orf65Q6ZTR6 163 aa12.13□□□□□ -0.47
CDC42EP4-201ENST00000335793 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.12□□□□□ -0.47
CDC42EP4-201ENST00000335793 IGKV2-29A2NJV5 120 aaPredicted RBP12.12□□□□□ -0.47
CDC42EP4-201ENST00000335793 IGHV3-33P01772 117 aa12.12□□□□□ -0.47
CDC42EP4-201ENST00000335793 CYSTM1Q9H1C7 97 aa12.12□□□□□ -0.47
CDC42EP4-201ENST00000335793 A0A0U1RRA0 63 aa12.12□□□□□ -0.47
CDC42EP4-201ENST00000335793 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
CDC42EP4-201ENST00000335793 Q9UF83 564 aa12.12□□□□□ -0.47
CDC42EP4-201ENST00000335793 A8MZ25 164 aa12.11□□□□□ -0.47
CDC42EP4-201ENST00000335793 EIF4EBP3O60516 100 aaPredicted RBP12.11□□□□□ -0.47
CDC42EP4-201ENST00000335793 IGHV3-30-3P0DP02 117 aa12.11□□□□□ -0.47
CDC42EP4-201ENST00000335793 KMT2BQ9UMN6 2715 aaPredicted RBP12.11□□□□□ -0.47
CDC42EP4-201ENST00000335793 SPANXA1Q9NS26 97 aa12.1□□□□□ -0.47
CDC42EP4-201ENST00000335793 TRIAP1O43715 76 aa12.1□□□□□ -0.47
CDC42EP4-201ENST00000335793 ZNF843Q8N446 348 aa12.1□□□□□ -0.47
CDC42EP4-201ENST00000335793 TRBV10-2A0A0K0K1G8 114 aa12.09□□□□□ -0.47
CDC42EP4-201ENST00000335793 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
CDC42EP4-201ENST00000335793 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
CDC42EP4-201ENST00000335793 RBMY1FQ15415 496 aaKnown RBP12.09□□□□□ -0.47
CDC42EP4-201ENST00000335793 RPL13AP40429 203 aaKnown RBP12.09□□□□□ -0.47
CDC42EP4-201ENST00000335793 NDUFA12Q9UI09 145 aa12.09□□□□□ -0.47
CDC42EP4-201ENST00000335793 PKIGQ9Y2B9 76 aa12.09□□□□□ -0.47
CDC42EP4-201ENST00000335793 H7C423 109 aa12.08□□□□□ -0.47
CDC42EP4-201ENST00000335793 M0R2P5 195 aa12.08□□□□□ -0.47
CDC42EP4-201ENST00000335793 UQCRQO14949 82 aa12.08□□□□□ -0.47
CDC42EP4-201ENST00000335793 TMEM61Q8N0U2 210 aa12.08□□□□□ -0.48
CDC42EP4-201ENST00000335793 LRRC75A-AS1Q8N1F1 130 aa12.08□□□□□ -0.48
CDC42EP4-201ENST00000335793 UBE2E2Q96LR5 201 aa12.08□□□□□ -0.48
CDC42EP4-201ENST00000335793 C1orf43Q9BWL3 253 aa12.08□□□□□ -0.48
CDC42EP4-201ENST00000335793 XCL2Q9UBD3 114 aa12.08□□□□□ -0.48
CDC42EP4-201ENST00000335793 TEX15Q9BXT5 2789 aa12.08□□□□□ -0.48
CDC42EP4-201ENST00000335793 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.08□□□□□ -0.48
CDC42EP4-201ENST00000335793 A0A0J9YXY3 114 aa12.08□□□□□ -0.48
CDC42EP4-201ENST00000335793 DSCR9P59020 149 aa12.08□□□□□ -0.48
CDC42EP4-201ENST00000335793 ZNF625Q96I27 306 aaPredicted RBP12.07□□□□□ -0.48
CDC42EP4-201ENST00000335793 ZNF415Q09FC8 603 aa12.07□□□□□ -0.48
CDC42EP4-201ENST00000335793 TRAV13-1A0A0B4J241 112 aa12.06□□□□□ -0.48
CDC42EP4-201ENST00000335793 A0A1W2PRX2 142 aa12.06□□□□□ -0.48
CDC42EP4-201ENST00000335793 DAND5Q8N907 189 aa12.06□□□□□ -0.48
CDC42EP4-201ENST00000335793 MXRA5Q9NR99 2828 aa12.06□□□□□ -0.48
CDC42EP4-201ENST00000335793 HIST2H2BCQ6DN03 193 aa12.06□□□□□ -0.48
CDC42EP4-201ENST00000335793 AMELXQ99217 191 aa12.06□□□□□ -0.48
CDC42EP4-201ENST00000335793 MTORP42345 2549 aa12.05□□□□□ -0.48
CDC42EP4-201ENST00000335793 IGHV3-53P01767 116 aa12.05□□□□□ -0.48
CDC42EP4-201ENST00000335793 Q6ZSN1 163 aa12.05□□□□□ -0.48
CDC42EP4-201ENST00000335793 TMEM263Q8WUH6 116 aaKnown RBP12.05□□□□□ -0.48
CDC42EP4-201ENST00000335793 LINC00526Q96FQ7 95 aa12.04□□□□□ -0.48
CDC42EP4-201ENST00000335793 PEMTQ9UBM1 199 aa12.04□□□□□ -0.48
CDC42EP4-201ENST00000335793 COX6CP09669 75 aa12.03□□□□□ -0.48
CDC42EP4-201ENST00000335793 SMCR5Q8TEV8 140 aa12.03□□□□□ -0.48
CDC42EP4-201ENST00000335793 ZNF702PQ9H963 129 aa12.03□□□□□ -0.48
CDC42EP4-201ENST00000335793 TRACP01848 142 aa12.03□□□□□ -0.48
CDC42EP4-201ENST00000335793 ITPR2Q14571 2701 aa12.02□□□□□ -0.48
CDC42EP4-201ENST00000335793 TMEM89A2RUT3 159 aa12.02□□□□□ -0.48
CDC42EP4-201ENST00000335793 NBPF19A0A087WUL8 3843 aa12.02□□□□□ -0.49
CDC42EP4-201ENST00000335793 TRGV1A0A0A0MS02 117 aa12.02□□□□□ -0.49
CDC42EP4-201ENST00000335793 OXTP01178 125 aa12.02□□□□□ -0.49
CDC42EP4-201ENST00000335793 LINC00467Q9BRT7 94 aa12.02□□□□□ -0.49
CDC42EP4-201ENST00000335793 IGHV1-58A0A0C4DH39 117 aa12.01□□□□□ -0.49
CDC42EP4-201ENST00000335793 ACANP16112 2415 aa12.01□□□□□ -0.49
CDC42EP4-201ENST00000335793 RBMY1BA6NDE4 496 aaKnown RBP12□□□□□ -0.49
CDC42EP4-201ENST00000335793 RBMY1EA6NEQ0 496 aaKnown RBP12□□□□□ -0.49
CDC42EP4-201ENST00000335793 WIPF1O43516 503 aa12□□□□□ -0.49
CDC42EP4-201ENST00000335793 RBMY1DP0C7P1 496 aaKnown RBP12□□□□□ -0.49
CDC42EP4-201ENST00000335793 ADAMTSL4-AS1Q5T5F5 129 aa12□□□□□ -0.49
CDC42EP4-201ENST00000335793 FN1P02751 2386 aaKnown RBP12□□□□□ -0.49
CDC42EP4-201ENST00000335793 TRBV7-7A0A0K0K1E9 115 aa12□□□□□ -0.49
CDC42EP4-201ENST00000335793 J3QLI3 93 aa12□□□□□ -0.49
CDC42EP4-201ENST00000335793 A0A0B4J2C4 111 aa11.99□□□□□ -0.49
CDC42EP4-201ENST00000335793 Q6YL49 198 aa11.99□□□□□ -0.49
CDC42EP4-201ENST00000335793 CDKN2A-AS1Q9UH64 79 aa11.99□□□□□ -0.49
CDC42EP4-201ENST00000335793 FBN2P35556 2912 aa11.99□□□□□ -0.49
CDC42EP4-201ENST00000335793 INSP01308 110 aa11.99□□□□□ -0.49
CDC42EP4-201ENST00000335793 STHQ8IWL8 128 aa11.99□□□□□ -0.49
CDC42EP4-201ENST00000335793 COX7CP15954 63 aa11.99□□□□□ -0.49
CDC42EP4-201ENST00000335793 MRPS36P82909 103 aaKnown RBP11.99□□□□□ -0.49
CDC42EP4-201ENST00000335793 CITED2Q99967 270 aaPredicted RBP11.99□□□□□ -0.49
CDC42EP4-201ENST00000335793 UBR5O95071 2799 aaPredicted RBP11.99□□□□□ -0.49
CDC42EP4-201ENST00000335793 IGKV3OR2-268A0A0C4DH90 116 aa11.98□□□□□ -0.49
CDC42EP4-201ENST00000335793 DPH3Q96FX2 82 aa11.98□□□□□ -0.49
CDC42EP4-201ENST00000335793 MAP6D1Q9H9H5 199 aa11.98□□□□□ -0.49
CDC42EP4-201ENST00000335793 PYGO1Q9Y3Y4 419 aa11.98□□□□□ -0.49
CDC42EP4-201ENST00000335793 CIRBPQ14011 172 aaKnown RBP11.98□□□□□ -0.49
CDC42EP4-201ENST00000335793 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
CDC42EP4-201ENST00000335793 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms