RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 TRBV6-5A0A0K0K1A5 114 aa15.17■□□□□ 0.02
CDKN3-202ENST00000335183 ZNF561-AS1K7EIQ3 104 aa15.17■□□□□ 0.02
CDKN3-202ENST00000335183 GAS8-AS1O95177 125 aa15.17■□□□□ 0.02
CDKN3-202ENST00000335183 SS18Q15532 418 aa15.17■□□□□ 0.02
CDKN3-202ENST00000335183 MRAP2Q96G30 205 aa15.17■□□□□ 0.02
CDKN3-202ENST00000335183 ST20Q9HBF5 79 aa15.17■□□□□ 0.02
CDKN3-202ENST00000335183 TSHBP01222 138 aa15.16■□□□□ 0.02
CDKN3-202ENST00000335183 ESDP10768 282 aa15.16■□□□□ 0.02
CDKN3-202ENST00000335183 BLOC1S1P78537 153 aa15.16■□□□□ 0.02
CDKN3-202ENST00000335183 A8MWL6 223 aa15.15■□□□□ 0.02
CDKN3-202ENST00000335183 SYCNQ0VAF6 134 aa15.15■□□□□ 0.02
CDKN3-202ENST00000335183 Q6ZRP5 223 aa15.15■□□□□ 0.02
CDKN3-202ENST00000335183 BORCS7Q96B45 105 aa15.15■□□□□ 0.02
CDKN3-202ENST00000335183 KRTAP10-8P60410 259 aa15.13■□□□□ 0.01
CDKN3-202ENST00000335183 CD164L2Q6UWJ8 174 aa15.13■□□□□ 0.01
CDKN3-202ENST00000335183 FAM231DQ6ZW35 169 aa15.13■□□□□ 0.01
CDKN3-202ENST00000335183 CDC42SE2Q9NRR3 84 aa15.13■□□□□ 0.01
CDKN3-202ENST00000335183 CAMPP49913 170 aa15.11■□□□□ 0.01
CDKN3-202ENST00000335183 CEBPGP53567 150 aa15.11■□□□□ 0.01
CDKN3-202ENST00000335183 GAGE2BQ13066 116 aa15.11■□□□□ 0.01
CDKN3-202ENST00000335183 ZNF664Q8N3J9 261 aa15.11■□□□□ 0.01
CDKN3-202ENST00000335183 C7orf77A4D0Y5 90 aa15.1■□□□□ 0.01
CDKN3-202ENST00000335183 TMEM250H0YL14 139 aa15.1■□□□□ 0.01
CDKN3-202ENST00000335183 PTTG1IPP53801 180 aa15.1■□□□□ 0.01
CDKN3-202ENST00000335183 SRSF9Q13242 221 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDKN3-202ENST00000335183 MRPL52Q86TS9 123 aaKnown RBP15.1■□□□□ 0.01
CDKN3-202ENST00000335183 MALP21145 153 aa15.09■□□□□ 0.01
CDKN3-202ENST00000335183 POLR2KP53803 58 aaKnown RBP15.09■□□□□ 0.01
CDKN3-202ENST00000335183 CT83Q5H943 113 aa15.09■□□□□ 0.01
CDKN3-202ENST00000335183 ISOC2Q96AB3 205 aa15.09■□□□□ 0.01
CDKN3-202ENST00000335183 IGLV4-69A0A075B6H9 119 aa15.08■□□□□ 0
CDKN3-202ENST00000335183 LOC107984640A0A0U1RRK4 108 aa15.08■□□□□ 0
CDKN3-202ENST00000335183 FAM210AQ96ND0 272 aa15.08■□□□□ 0
CDKN3-202ENST00000335183 TMEM191AQ9H0A3 160 aa15.08■□□□□ 0
CDKN3-202ENST00000335183 RNF213Q63HN8 5207 aa15.08■□□□□ 0
CDKN3-202ENST00000335183 TRBV27A0A0K0K1C4 114 aa15.07■□□□□ 0
CDKN3-202ENST00000335183 A0A1B0GUT8 65 aa15.07■□□□□ 0
CDKN3-202ENST00000335183 HIGD1CA8MV81 97 aa15.06■□□□□ 0
CDKN3-202ENST00000335183 RAB4AP20338 218 aa15.06■□□□□ 0
CDKN3-202ENST00000335183 AMN1Q8IY45 258 aa15.05■□□□□ -0
CDKN3-202ENST00000335183 CAMK2N2Q96S95 79 aa15.05■□□□□ -0
CDKN3-202ENST00000335183 C1orf196B1AJZ1 125 aa15.04■□□□□ -0
CDKN3-202ENST00000335183 COX7A2LO14548 114 aa15.04■□□□□ -0
CDKN3-202ENST00000335183 FCER1GP30273 86 aa15.04■□□□□ -0
CDKN3-202ENST00000335183 RNASE13Q5GAN3 156 aaKnown RBP15.04■□□□□ -0
CDKN3-202ENST00000335183 TSKUQ8WUA8 353 aa15.04■□□□□ -0
CDKN3-202ENST00000335183 A0A1W2PNN7 141 aa15.03■□□□□ -0
CDKN3-202ENST00000335183 SMKR1H3BMG3 65 aa15.03■□□□□ -0
CDKN3-202ENST00000335183 NUP35Q8NFH5 326 aa15.03■□□□□ -0
CDKN3-202ENST00000335183 TRAV13-1A0A0B4J241 112 aa15.01□□□□□ -0.01
CDKN3-202ENST00000335183 VCYO14598 125 aa15.01□□□□□ -0.01
CDKN3-202ENST00000335183 RPL18AQ02543 176 aaKnown RBP15.01□□□□□ -0.01
CDKN3-202ENST00000335183 SMIM7Q9BQ49 75 aa15.01□□□□□ -0.01
CDKN3-202ENST00000335183 APOMO95445 188 aa15□□□□□ -0.01
CDKN3-202ENST00000335183 LINC01551Q86U37 167 aa15□□□□□ -0.01
CDKN3-202ENST00000335183 UBE2D4Q9Y2X8 147 aa15□□□□□ -0.01
CDKN3-202ENST00000335183 MT-ND6P03923 174 aa14.99□□□□□ -0.01
CDKN3-202ENST00000335183 SMAGPQ0VAQ4 97 aa14.99□□□□□ -0.01
CDKN3-202ENST00000335183 C9orf116Q5BN46 136 aaPredicted RBP14.99□□□□□ -0.01
CDKN3-202ENST00000335183 C5orf38Q86SI9 138 aa14.99□□□□□ -0.01
CDKN3-202ENST00000335183 PSORS1C2Q9UIG4 136 aa14.99□□□□□ -0.01
CDKN3-202ENST00000335183 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.98□□□□□ -0.01
CDKN3-202ENST00000335183 KIR2DL4Q99706 377 aa14.98□□□□□ -0.01
CDKN3-202ENST00000335183 EIF5A2Q9GZV4 153 aaKnown RBP14.98□□□□□ -0.01
CDKN3-202ENST00000335183 CSDC2Q9Y534 153 aaKnown RBP14.98□□□□□ -0.01
CDKN3-202ENST00000335183 SUMO2P61956 95 aaKnown RBP14.97□□□□□ -0.01
CDKN3-202ENST00000335183 RIGQ13278 110 aa14.97□□□□□ -0.01
CDKN3-202ENST00000335183 C2orf48Q96LS8 159 aa14.97□□□□□ -0.01
CDKN3-202ENST00000335183 OSTCQ9NRP0 149 aa14.97□□□□□ -0.01
CDKN3-202ENST00000335183 ZNF727A8MUV8 499 aa14.96□□□□□ -0.01
CDKN3-202ENST00000335183 PPP1R17O96001 155 aa14.96□□□□□ -0.01
CDKN3-202ENST00000335183 Q6ZUT4 128 aa14.96□□□□□ -0.01
CDKN3-202ENST00000335183 PHF5AQ7RTV0 110 aaKnown RBP14.96□□□□□ -0.01
CDKN3-202ENST00000335183 NRACQ8N912 160 aa14.96□□□□□ -0.01
CDKN3-202ENST00000335183 OPRPNQ99935 248 aaPredicted RBP14.96□□□□□ -0.01
CDKN3-202ENST00000335183 SPAG11BQ08648 103 aa14.95□□□□□ -0.02
CDKN3-202ENST00000335183 C1orf137Q5JT78 98 aa14.95□□□□□ -0.02
CDKN3-202ENST00000335183 TMEM18Q96B42 140 aa14.93□□□□□ -0.02
CDKN3-202ENST00000335183 V9GYV3 84 aa14.93□□□□□ -0.02
CDKN3-202ENST00000335183 PPP1R2P9O14990 202 aa14.92□□□□□ -0.02
CDKN3-202ENST00000335183 SRP19P09132 144 aaKnown RBP14.9□□□□□ -0.02
CDKN3-202ENST00000335183 TIMM21Q9BVV7 248 aa14.9□□□□□ -0.02
CDKN3-202ENST00000335183 RNF151Q2KHN1 245 aa14.89□□□□□ -0.03
CDKN3-202ENST00000335183 MRPL51Q4U2R6 128 aaKnown RBP14.89□□□□□ -0.03
CDKN3-202ENST00000335183 OR10D4PQ8NGN7 298 aa14.89□□□□□ -0.03
CDKN3-202ENST00000335183 ORAOV1Q8WV07 137 aa14.88□□□□□ -0.03
CDKN3-202ENST00000335183 NAT8BQ9UHF3 227 aa14.88□□□□□ -0.03
CDKN3-202ENST00000335183 RPL39P62891 51 aaKnown RBP14.87□□□□□ -0.03
CDKN3-202ENST00000335183 FAM104BQ5XKR9 115 aa14.87□□□□□ -0.03
CDKN3-202ENST00000335183 MRPL35Q9NZE8 188 aaKnown RBP14.86□□□□□ -0.03
CDKN3-202ENST00000335183 IGLV7-43P04211 117 aa14.85□□□□□ -0.03
CDKN3-202ENST00000335183 NDUFA1O15239 70 aa14.84□□□□□ -0.03
CDKN3-202ENST00000335183 CKS2P33552 79 aa14.84□□□□□ -0.03
CDKN3-202ENST00000335183 PRR26Q8N8Z3 221 aa14.84□□□□□ -0.03
CDKN3-202ENST00000335183 DIRC1Q969H9 104 aa14.84□□□□□ -0.03
CDKN3-202ENST00000335183 IMMP2LQ96T52 175 aa14.84□□□□□ -0.03
CDKN3-202ENST00000335183 C20orf78Q9BR46 151 aa14.84□□□□□ -0.03
CDKN3-202ENST00000335183 SMDT1Q9H4I9 107 aa14.84□□□□□ -0.03
CDKN3-202ENST00000335183 A0A087WZ39 114 aa14.83□□□□□ -0.04
CDKN3-202ENST00000335183 FAM168BA1KXE4 195 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms