RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TMEM101Q96IK0 257 aa10.18□□□□□ -0.78
SF1-202ENST00000334944 A0A1W2PRX2 142 aa10.18□□□□□ -0.78
SF1-202ENST00000334944 IGIPA6NJ69 53 aa10.18□□□□□ -0.78
SF1-202ENST00000334944 IGHV3-16A0A0C4DH30 117 aa10.18□□□□□ -0.78
SF1-202ENST00000334944 RBMY1A1P0DJD3 496 aaKnown RBP10.18□□□□□ -0.78
SF1-202ENST00000334944 RBMY1CP0DJD4 496 aa10.18□□□□□ -0.78
SF1-202ENST00000334944 RBMY1FQ15415 496 aaKnown RBP10.18□□□□□ -0.78
SF1-202ENST00000334944 WFDC11Q8NEX6 87 aa10.18□□□□□ -0.78
SF1-202ENST00000334944 SMCR5Q8TEV8 140 aa10.18□□□□□ -0.78
SF1-202ENST00000334944 POM121L12Q8N7R1 296 aa10.17□□□□□ -0.78
SF1-202ENST00000334944 CYSTM1Q9H1C7 97 aa10.17□□□□□ -0.78
SF1-202ENST00000334944 A8MZ25 164 aa10.17□□□□□ -0.78
SF1-202ENST00000334944 UBE2E2Q96LR5 201 aa10.17□□□□□ -0.78
SF1-202ENST00000334944 ICOSQ9Y6W8 199 aa10.17□□□□□ -0.78
SF1-202ENST00000334944 A0A0B4J2C4 111 aa10.16□□□□□ -0.78
SF1-202ENST00000334944 SDHAF1A6NFY7 115 aa10.16□□□□□ -0.78
SF1-202ENST00000334944 FSHBP01225 129 aa10.16□□□□□ -0.78
SF1-202ENST00000334944 C3orf22Q8N5N4 141 aa10.16□□□□□ -0.78
SF1-202ENST00000334944 DAND5Q8N907 189 aa10.16□□□□□ -0.78
SF1-202ENST00000334944 ZNF876PQ49A33 203 aa10.16□□□□□ -0.78
SF1-202ENST00000334944 SPXQ9BT56 116 aa10.16□□□□□ -0.78
SF1-202ENST00000334944 A0A0J9YXV3 536 aa10.15□□□□□ -0.78
SF1-202ENST00000334944 M0R2P5 195 aa10.15□□□□□ -0.78
SF1-202ENST00000334944 PROK1P58294 105 aa10.15□□□□□ -0.78
SF1-202ENST00000334944 TMEM61Q8N0U2 210 aa10.15□□□□□ -0.78
SF1-202ENST00000334944 IGHV1OR15-1A0A075B7D0 117 aa10.15□□□□□ -0.78
SF1-202ENST00000334944 NSUN5P1Q3KNT7 163 aa10.15□□□□□ -0.78
SF1-202ENST00000334944 ADAMTSL4-AS1Q5T5F5 129 aa10.15□□□□□ -0.78
SF1-202ENST00000334944 TMEM223A0PJW6 202 aa10.15□□□□□ -0.79
SF1-202ENST00000334944 MED14OSP0DP75 135 aa10.15□□□□□ -0.79
SF1-202ENST00000334944 RNASE13Q5GAN3 156 aaKnown RBP10.15□□□□□ -0.79
SF1-202ENST00000334944 KIR2DL5BQ8NHK3 375 aa10.15□□□□□ -0.79
SF1-202ENST00000334944 FASNP49327 2511 aaKnown RBP10.15□□□□□ -0.79
SF1-202ENST00000334944 SETXQ7Z333 2677 aaKnown RBP10.14□□□□□ -0.79
SF1-202ENST00000334944 hADV29S1A0JD25 119 aa10.14□□□□□ -0.79
SF1-202ENST00000334944 Q9UF83 564 aa10.14□□□□□ -0.79
SF1-202ENST00000334944 HECTD1Q9ULT8 2610 aa10.14□□□□□ -0.79
SF1-202ENST00000334944 TRBV7-7A0A0K0K1E9 115 aa10.14□□□□□ -0.79
SF1-202ENST00000334944 NXPH4O95158 308 aa10.14□□□□□ -0.79
SF1-202ENST00000334944 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
SF1-202ENST00000334944 TRBV30A0A0K0K1B3 111 aa10.13□□□□□ -0.79
SF1-202ENST00000334944 PAPPA-AS1Q5QFB9 102 aa10.13□□□□□ -0.79
SF1-202ENST00000334944 KRTAP1-3Q8IUG1 177 aa10.13□□□□□ -0.79
SF1-202ENST00000334944 RBMY1BA6NDE4 496 aaKnown RBP10.13□□□□□ -0.79
SF1-202ENST00000334944 RBMY1EA6NEQ0 496 aaKnown RBP10.13□□□□□ -0.79
SF1-202ENST00000334944 RBMY1DP0C7P1 496 aaKnown RBP10.13□□□□□ -0.79
SF1-202ENST00000334944 C9orf85Q96MD7 179 aa10.13□□□□□ -0.79
SF1-202ENST00000334944 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.12□□□□□ -0.79
SF1-202ENST00000334944 I3L3M4 83 aa10.12□□□□□ -0.79
SF1-202ENST00000334944 J3KT08 172 aa10.12□□□□□ -0.79
SF1-202ENST00000334944 A0A0U1RRA0 63 aa10.12□□□□□ -0.79
SF1-202ENST00000334944 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
SF1-202ENST00000334944 GAGE2AQ6NT46 116 aa10.11□□□□□ -0.79
SF1-202ENST00000334944 TMEM89A2RUT3 159 aa10.11□□□□□ -0.79
SF1-202ENST00000334944 M0QY20 66 aa10.11□□□□□ -0.79
SF1-202ENST00000334944 LEPROTO15243 131 aa10.11□□□□□ -0.79
SF1-202ENST00000334944 RHOHQ15669 191 aa10.1□□□□□ -0.79
SF1-202ENST00000334944 VCYO14598 125 aa10.1□□□□□ -0.79
SF1-202ENST00000334944 UQCRQO14949 82 aa10.1□□□□□ -0.79
SF1-202ENST00000334944 COX6CP09669 75 aa10.1□□□□□ -0.79
SF1-202ENST00000334944 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
SF1-202ENST00000334944 FN1P02751 2386 aaKnown RBP10.1□□□□□ -0.79
SF1-202ENST00000334944 IGHV3OR16-12A0A075B7B8 117 aa10.1□□□□□ -0.79
SF1-202ENST00000334944 DYNLRB2Q8TF09 96 aa10.1□□□□□ -0.79
SF1-202ENST00000334944 H3BT86 120 aa10.09□□□□□ -0.79
SF1-202ENST00000334944 UNC79Q9P2D8 2635 aa10.09□□□□□ -0.79
SF1-202ENST00000334944 C4orf26Q17RF5 130 aa10.09□□□□□ -0.79
SF1-202ENST00000334944 DSCR8Q96T75 97 aa10.09□□□□□ -0.79
SF1-202ENST00000334944 PDZD2O15018 2839 aa10.08□□□□□ -0.8
SF1-202ENST00000334944 PPP1R17O96001 155 aa10.08□□□□□ -0.8
SF1-202ENST00000334944 LINC00526Q96FQ7 95 aa10.08□□□□□ -0.8
SF1-202ENST00000334944 LST1O00453 97 aa10.08□□□□□ -0.8
SF1-202ENST00000334944 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
SF1-202ENST00000334944 TRAV13-1A0A0B4J241 112 aa10.08□□□□□ -0.8
SF1-202ENST00000334944 ESM1Q9NQ30 184 aa10.07□□□□□ -0.8
SF1-202ENST00000334944 HIVEP2P31629 2446 aa10.07□□□□□ -0.8
SF1-202ENST00000334944 DNAJC9-AS1A6NH13 148 aa10.07□□□□□ -0.8
SF1-202ENST00000334944 HRCT1Q6UXD1 115 aa10.07□□□□□ -0.8
SF1-202ENST00000334944 LITAFQ99732 161 aa10.07□□□□□ -0.8
SF1-202ENST00000334944 XCL2Q9UBD3 114 aa10.07□□□□□ -0.8
SF1-202ENST00000334944 TRAV25A0A0B4J276 109 aa10.06□□□□□ -0.8
SF1-202ENST00000334944 Q6ZSN1 163 aa10.06□□□□□ -0.8
SF1-202ENST00000334944 RNF152Q8N8N0 203 aa10.06□□□□□ -0.8
SF1-202ENST00000334944 TMEM141Q96I45 108 aa10.06□□□□□ -0.8
SF1-202ENST00000334944 TRBV27A0A0K0K1C4 114 aa10.06□□□□□ -0.8
SF1-202ENST00000334944 FAM240AA0A1B0GVK7 77 aa10.06□□□□□ -0.8
SF1-202ENST00000334944 OXTP01178 125 aa10.06□□□□□ -0.8
SF1-202ENST00000334944 MAP6D1Q9H9H5 199 aa10.06□□□□□ -0.8
SF1-202ENST00000334944 TIMM17AQ99595 171 aa10.05□□□□□ -0.8
SF1-202ENST00000334944 LRRC75A-AS1Q8N1F1 130 aa10.05□□□□□ -0.8
SF1-202ENST00000334944 ZNF625Q96I27 306 aaPredicted RBP10.05□□□□□ -0.8
SF1-202ENST00000334944 IGHV3-38A0A0C4DH36 116 aa10.05□□□□□ -0.8
SF1-202ENST00000334944 C4orf3Q8WVX3 66 aa10.05□□□□□ -0.8
SF1-202ENST00000334944 CD28P10747 220 aa10.04□□□□□ -0.8
SF1-202ENST00000334944 COX7CP15954 63 aa10.04□□□□□ -0.8
SF1-202ENST00000334944 SDIM1Q6ZPB5 146 aa10.04□□□□□ -0.8
SF1-202ENST00000334944 TIMM21Q9BVV7 248 aa10.04□□□□□ -0.8
SF1-202ENST00000334944 DEFB114Q30KQ6 69 aa10.04□□□□□ -0.8
SF1-202ENST00000334944 PEMTQ9UBM1 199 aa10.04□□□□□ -0.8
SF1-202ENST00000334944 NDUFA12Q9UI09 145 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms