RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 SMIM6P0DI80 62 aa11.81□□□□□ -0.52
CHGA-202ENST00000334654 PKIAP61925 76 aa11.81□□□□□ -0.52
CHGA-202ENST00000334654 RYR2Q92736 4967 aa11.8□□□□□ -0.52
CHGA-202ENST00000334654 C2orf66Q6UXQ4 117 aa11.8□□□□□ -0.52
CHGA-202ENST00000334654 TIMM21Q9BVV7 248 aa11.8□□□□□ -0.52
CHGA-202ENST00000334654 K7EP13 123 aa11.79□□□□□ -0.52
CHGA-202ENST00000334654 M0R2N4 97 aa11.79□□□□□ -0.52
CHGA-202ENST00000334654 HSPB8Q9UJY1 196 aa11.79□□□□□ -0.52
CHGA-202ENST00000334654 CSDC2Q9Y534 153 aaKnown RBP11.79□□□□□ -0.52
CHGA-202ENST00000334654 IBA57-AS1B1ANH7 110 aa11.78□□□□□ -0.52
CHGA-202ENST00000334654 ZNF25P17030 456 aaPredicted RBP11.78□□□□□ -0.52
CHGA-202ENST00000334654 AMMECR1LQ6DCA0 310 aa11.78□□□□□ -0.52
CHGA-202ENST00000334654 TOMM6Q96B49 74 aa11.78□□□□□ -0.52
CHGA-202ENST00000334654 KLK12Q9UKR0 248 aa11.78□□□□□ -0.52
CHGA-202ENST00000334654 LEPROTL1O95214 131 aa11.77□□□□□ -0.52
CHGA-202ENST00000334654 BTF3P20290 206 aaKnown RBP11.77□□□□□ -0.52
CHGA-202ENST00000334654 JOSD1Q15040 202 aaPredicted RBP11.77□□□□□ -0.52
CHGA-202ENST00000334654 CDC42SE2Q9NRR3 84 aa11.77□□□□□ -0.52
CHGA-202ENST00000334654 CYSLTR1Q9Y271 337 aa11.77□□□□□ -0.52
CHGA-202ENST00000334654 PYGO1Q9Y3Y4 419 aa11.77□□□□□ -0.52
CHGA-202ENST00000334654 TRAV9-2A0A087WT02 112 aa11.76□□□□□ -0.53
CHGA-202ENST00000334654 HBDP02042 147 aa11.76□□□□□ -0.53
CHGA-202ENST00000334654 ANGP03950 147 aaKnown RBP11.76□□□□□ -0.53
CHGA-202ENST00000334654 PMCHL1Q16048 86 aa11.76□□□□□ -0.53
CHGA-202ENST00000334654 TTC32Q5I0X7 151 aa11.76□□□□□ -0.53
CHGA-202ENST00000334654 ENHOQ6UWT2 76 aa11.76□□□□□ -0.53
CHGA-202ENST00000334654 FAM19A2Q8N3H0 131 aa11.76□□□□□ -0.53
CHGA-202ENST00000334654 C10orf126Q8N4M7 172 aa11.76□□□□□ -0.53
CHGA-202ENST00000334654 OPRPNQ99935 248 aaPredicted RBP11.76□□□□□ -0.53
CHGA-202ENST00000334654 PRR34Q9NV39 138 aa11.76□□□□□ -0.53
CHGA-202ENST00000334654 IGIPA6NJ69 53 aa11.76□□□□□ -0.53
CHGA-202ENST00000334654 SPANXA1Q9NS26 97 aa11.76□□□□□ -0.53
CHGA-202ENST00000334654 LINC00518Q8N0U6 118 aa11.75□□□□□ -0.53
CHGA-202ENST00000334654 LINC00269Q8N2A0 174 aa11.75□□□□□ -0.53
CHGA-202ENST00000334654 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
CHGA-202ENST00000334654 Q6ZUT4 128 aa11.74□□□□□ -0.53
CHGA-202ENST00000334654 ZNF664Q8N3J9 261 aa11.74□□□□□ -0.53
CHGA-202ENST00000334654 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
CHGA-202ENST00000334654 IGLV4-3A0A075B6K6 122 aa11.73□□□□□ -0.53
CHGA-202ENST00000334654 MRPS36P82909 103 aaKnown RBP11.73□□□□□ -0.53
CHGA-202ENST00000334654 SMAGPQ0VAQ4 97 aa11.73□□□□□ -0.53
CHGA-202ENST00000334654 DGAT2L7PQ6IED9 249 aa11.73□□□□□ -0.53
CHGA-202ENST00000334654 SPATA12Q7Z6I5 190 aa11.73□□□□□ -0.53
CHGA-202ENST00000334654 REG3AQ06141 175 aa11.72□□□□□ -0.53
CHGA-202ENST00000334654 RNASE13Q5GAN3 156 aaKnown RBP11.72□□□□□ -0.53
CHGA-202ENST00000334654 PYY3Q5JQD4 70 aa11.72□□□□□ -0.53
CHGA-202ENST00000334654 CLPSL2Q6UWE3 100 aa11.72□□□□□ -0.53
CHGA-202ENST00000334654 ERASQ7Z444 233 aa11.72□□□□□ -0.53
CHGA-202ENST00000334654 UBE2WQ96B02 151 aa11.72□□□□□ -0.53
CHGA-202ENST00000334654 MAP1LC3CQ9BXW4 147 aa11.72□□□□□ -0.53
CHGA-202ENST00000334654 TIMM17AQ99595 171 aa11.71□□□□□ -0.53
CHGA-202ENST00000334654 ATP5LO75964 103 aa11.7□□□□□ -0.54
CHGA-202ENST00000334654 NPSP0C0P6 89 aa11.7□□□□□ -0.54
CHGA-202ENST00000334654 Q6ZRN7 208 aaPredicted RBP11.7□□□□□ -0.54
CHGA-202ENST00000334654 SCGB3A1Q96QR1 104 aa11.7□□□□□ -0.54
CHGA-202ENST00000334654 DNAH2Q9P225 4427 aa11.7□□□□□ -0.54
CHGA-202ENST00000334654 RYR3Q15413 4870 aa11.7□□□□□ -0.54
CHGA-202ENST00000334654 PET117Q6UWS5 81 aa11.7□□□□□ -0.54
CHGA-202ENST00000334654 LINC00173Q6ZV60 143 aa11.7□□□□□ -0.54
CHGA-202ENST00000334654 Q9HAA7 133 aa11.7□□□□□ -0.54
CHGA-202ENST00000334654 TRAV8-3A0A0A6YYJ7 113 aa11.69□□□□□ -0.54
CHGA-202ENST00000334654 C3orf79P0CE67 100 aa11.69□□□□□ -0.54
CHGA-202ENST00000334654 ZC2HC1BQ5TFG8 222 aa11.69□□□□□ -0.54
CHGA-202ENST00000334654 KRTAP26-1Q6PEX3 210 aa11.69□□□□□ -0.54
CHGA-202ENST00000334654 C6orf223Q8N319 242 aa11.69□□□□□ -0.54
CHGA-202ENST00000334654 TMEM141Q96I45 108 aa11.69□□□□□ -0.54
CHGA-202ENST00000334654 AMELXQ99217 191 aa11.69□□□□□ -0.54
CHGA-202ENST00000334654 C12orf57Q99622 126 aa11.69□□□□□ -0.54
CHGA-202ENST00000334654 KRTDAPP60985 99 aa11.68□□□□□ -0.54
CHGA-202ENST00000334654 MIAQ16674 131 aa11.68□□□□□ -0.54
CHGA-202ENST00000334654 DNAH10Q8IVF4 4471 aa11.68□□□□□ -0.54
CHGA-202ENST00000334654 IGKV3OR2-268A0A0C4DH90 116 aa11.67□□□□□ -0.54
CHGA-202ENST00000334654 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
CHGA-202ENST00000334654 C20orf202A1L168 122 aa11.67□□□□□ -0.54
CHGA-202ENST00000334654 SYS1-DBNDD2H3BUS1 97 aa11.67□□□□□ -0.54
CHGA-202ENST00000334654 SCGB1D1O95968 90 aa11.67□□□□□ -0.54
CHGA-202ENST00000334654 CRPP02741 224 aa11.67□□□□□ -0.54
CHGA-202ENST00000334654 C1orf134Q5TEV5 83 aa11.67□□□□□ -0.54
CHGA-202ENST00000334654 FRAS1Q86XX4 4008 aa11.66□□□□□ -0.54
CHGA-202ENST00000334654 RTL8CO15255 209 aa11.66□□□□□ -0.54
CHGA-202ENST00000334654 S100A12P80511 92 aa11.66□□□□□ -0.54
CHGA-202ENST00000334654 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.54
CHGA-202ENST00000334654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.65□□□□□ -0.54
CHGA-202ENST00000334654 IFI27L1Q96BM0 104 aa11.65□□□□□ -0.54
CHGA-202ENST00000334654 TRAV8-4A0A0B4J246 113 aa11.64□□□□□ -0.55
CHGA-202ENST00000334654 NFE4Q86UQ8 179 aa11.64□□□□□ -0.55
CHGA-202ENST00000334654 MAPKAPK5-AS1Q8N8E1 139 aa11.64□□□□□ -0.55
CHGA-202ENST00000334654 BAALCQ8WXS3 180 aa11.64□□□□□ -0.55
CHGA-202ENST00000334654 VCX2Q9H322 139 aa11.64□□□□□ -0.55
CHGA-202ENST00000334654 TEX43Q6ZNM6 134 aa11.63□□□□□ -0.55
CHGA-202ENST00000334654 IGKV2D-24A0A075B6R9 120 aa11.63□□□□□ -0.55
CHGA-202ENST00000334654 TRAV13-1A0A0B4J241 112 aa11.63□□□□□ -0.55
CHGA-202ENST00000334654 PAPPA-AS1Q5QFB9 102 aa11.63□□□□□ -0.55
CHGA-202ENST00000334654 Q6ZN92 141 aa11.63□□□□□ -0.55
CHGA-202ENST00000334654 C1orf43Q9BWL3 253 aa11.63□□□□□ -0.55
CHGA-202ENST00000334654 PRSS29PA6NIE9 313 aa11.62□□□□□ -0.55
CHGA-202ENST00000334654 UBE2D1P51668 147 aa11.62□□□□□ -0.55
CHGA-202ENST00000334654 LINC01545Q5VT33 79 aa11.62□□□□□ -0.55
CHGA-202ENST00000334654 CHCHD10Q8WYQ3 142 aaPredicted RBP11.62□□□□□ -0.55
CHGA-202ENST00000334654 CST9LQ9H4G1 147 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms