RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 TRBV7-3A0A075B6L6 115 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 C19orf71A6NCJ1 209 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 LRCOL1A6NCL2 159 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 F2Z2F3 143 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 IGLV2-8P01709 118 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 UBE2D3P61077 147 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 UBE2D2P62837 147 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 PMVKQ15126 192 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 ELOBQ15370 118 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 TAL2Q16559 108 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 FER1L6-AS1Q8NA97 138 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 RMI2Q96E14 147 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 SAMD10Q9BYL1 202 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 JPT2Q9H910 190 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 GNG13Q9P2W3 67 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 VAX2Q9UIW0 290 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 LAMTOR2Q9Y2Q5 125 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 IGHV3-73A0A0B4J1V6 119 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 GRIFINA4D1Z8 144 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 GAGE12JA6NER3 117 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 M0R381 172 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 IGLC6P0CF74 106 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 BCL2P10415 239 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 CACNG7P62955 275 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 RPL24P83731 157 aaKnown RBP4.23□□□□□ -1.73
SMG1-201ENST00000330588 GAGE4Q13068 117 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 C14orf178Q8N769 122 aaPredicted RBP4.23□□□□□ -1.73
SMG1-201ENST00000330588 AP1S3Q96PC3 154 aa4.23□□□□□ -1.73
SMG1-201ENST00000330588 EPPK1P58107 5090 aaKnown RBP4.22□□□□□ -1.73
SMG1-201ENST00000330588 HECTD4Q9Y4D8 3996 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 TMEM250H0YL14 139 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 H7C1H1 209 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 J3QR89 54 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 PSCAO43653 123 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 XGP55808 180 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 HSD52Q0P140 79 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 Q0VG73 95 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 CENPWQ5EE01 88 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 SERTAD4-AS1Q5TG53 156 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 FAM74A4Q5TZK3 123 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 SPANXN1Q5VSR9 72 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 DAZ4Q86SG3 579 aaKnown RBP4.22□□□□□ -1.73
SMG1-201ENST00000330588 TMEM70Q9BUB7 260 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 CNFNQ9BYD5 112 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 DAZ3Q9NR90 486 aaKnown RBP4.22□□□□□ -1.73
SMG1-201ENST00000330588 KIF25-AS1Q9Y6Z4 181 aa4.22□□□□□ -1.73
SMG1-201ENST00000330588 RBFOX3A6NFN3 312 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 J3KT08 172 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 TRGC1P0CF51 173 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 CTRLP40313 264 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 COA6Q5JTJ3 125 aaKnown RBP4.21□□□□□ -1.74
SMG1-201ENST00000330588 GTF2H5Q6ZYL4 71 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 FAM19A1Q7Z5A9 133 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 Q8N814 137 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 MAPKAPK5-AS1Q8N8E1 139 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 NEXN-AS1Q8NBZ9 246 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 OR10AG1Q8NH19 301 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 FRZBQ92765 325 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 HIST1H2BLQ99880 126 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 DERL1Q9BUN8 251 aa4.21□□□□□ -1.74
SMG1-201ENST00000330588 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 TRBV20OR9-2A0A075B6H5 130 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 TMSB15BA0A087X1C1 80 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 TRBV6-8A0A0A6YYG3 113 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 A0A1B0GV50 99 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 P01737 135 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 IGHV3-30P01768 117 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 IGHV3-33P01772 117 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 IGHV3-30-3P0DP02 117 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 IGHV3-30-5P0DP03 117 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 ADCYAP1P18509 176 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 ZNF56Q15929 161 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 ALKAL2Q6UX46 152 aa4.2□□□□□ -1.74
SMG1-201ENST00000330588 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.19□□□□□ -1.74
SMG1-201ENST00000330588 NDUFA6P56556 154 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 C4orf26Q17RF5 130 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 FAM231DQ6ZW35 169 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 Q8N976 141 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 GATD1Q8NB37 220 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 PGLYRP4Q96LB8 373 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 Q9UF83 564 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 IGLV5-52A0A0A0MRZ9 124 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 M0QY20 66 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 FABP4P15090 132 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 C14orf177Q52M58 125 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 Q8N9P0 234 aaPredicted RBP4.19□□□□□ -1.74
SMG1-201ENST00000330588 ANAPC13Q9BS18 74 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 DPH3P1Q9H4G8 78 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 RPP21Q9H633 154 aaKnown RBP4.19□□□□□ -1.74
SMG1-201ENST00000330588 Q9HAA7 133 aa4.19□□□□□ -1.74
SMG1-201ENST00000330588 TRBV25-1A0A075B6N4 114 aa4.18□□□□□ -1.74
SMG1-201ENST00000330588 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
SMG1-201ENST00000330588 A0A1B0GUV1 79 aa4.18□□□□□ -1.74
SMG1-201ENST00000330588 FAM231BA6NCW3 169 aa4.18□□□□□ -1.74
SMG1-201ENST00000330588 RPL13AP40429 203 aaKnown RBP4.18□□□□□ -1.74
SMG1-201ENST00000330588 FOXA3P55318 350 aaPredicted RBP4.18□□□□□ -1.74
SMG1-201ENST00000330588 KRTAP10-1P60331 282 aa4.18□□□□□ -1.74
SMG1-201ENST00000330588 CD164Q04900 197 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms