RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 PAPPA-AS1Q5QFB9 102 aa12.66□□□□□ -0.38
PRKCD-201ENST00000330452 A0A0U1RQV1 116 aa12.66□□□□□ -0.38
PRKCD-201ENST00000330452 M0R381 172 aa12.66□□□□□ -0.38
PRKCD-201ENST00000330452 PSMB8P28062 276 aa12.66□□□□□ -0.38
PRKCD-201ENST00000330452 SYNJ2BPP57105 145 aa12.66□□□□□ -0.38
PRKCD-201ENST00000330452 BLCAPP62952 87 aa12.66□□□□□ -0.38
PRKCD-201ENST00000330452 ZFAND2AQ8N6M9 145 aa12.66□□□□□ -0.38
PRKCD-201ENST00000330452 FASNP49327 2511 aaKnown RBP12.65□□□□□ -0.38
PRKCD-201ENST00000330452 H3BUX3 64 aa12.65□□□□□ -0.38
PRKCD-201ENST00000330452 IGHV4-4A0A075B6R2 117 aa12.65□□□□□ -0.38
PRKCD-201ENST00000330452 NDUFA4O00483 81 aa12.65□□□□□ -0.39
PRKCD-201ENST00000330452 SOCS3O14543 225 aa12.64□□□□□ -0.39
PRKCD-201ENST00000330452 PRSS2P07478 247 aa12.64□□□□□ -0.39
PRKCD-201ENST00000330452 TRAV12-2A0A075B6T6 113 aa12.63□□□□□ -0.39
PRKCD-201ENST00000330452 GCN1Q92616 2671 aaKnown RBP12.63□□□□□ -0.39
PRKCD-201ENST00000330452 NDUFC2-KCTD14E9PQ53 114 aa12.62□□□□□ -0.39
PRKCD-201ENST00000330452 I3L3M4 83 aa12.62□□□□□ -0.39
PRKCD-201ENST00000330452 TSHBP01222 138 aa12.62□□□□□ -0.39
PRKCD-201ENST00000330452 S100A4P26447 101 aaKnown RBP12.62□□□□□ -0.39
PRKCD-201ENST00000330452 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
PRKCD-201ENST00000330452 LENEPQ9Y5L5 61 aa12.62□□□□□ -0.39
PRKCD-201ENST00000330452 IGHG2P01859 326 aa12.62□□□□□ -0.39
PRKCD-201ENST00000330452 TRAV21A0A0B4J279 112 aa12.61□□□□□ -0.39
PRKCD-201ENST00000330452 GNRH2O43555 120 aa12.61□□□□□ -0.39
PRKCD-201ENST00000330452 SUMO2P61956 95 aaKnown RBP12.61□□□□□ -0.39
PRKCD-201ENST00000330452 Q6ZSV7 163 aa12.61□□□□□ -0.39
PRKCD-201ENST00000330452 A0A1W2PRX2 142 aa12.61□□□□□ -0.39
PRKCD-201ENST00000330452 IL17DQ8TAD2 202 aa12.61□□□□□ -0.39
PRKCD-201ENST00000330452 RPL39LQ96EH5 51 aaKnown RBP12.61□□□□□ -0.39
PRKCD-201ENST00000330452 SORL1Q92673 2214 aa12.6□□□□□ -0.39
PRKCD-201ENST00000330452 A6NDX4 124 aa12.6□□□□□ -0.39
PRKCD-201ENST00000330452 RHPN1-AS1Q9BWJ2 59 aa12.6□□□□□ -0.39
PRKCD-201ENST00000330452 NIPBLQ6KC79 2804 aaeCLIP12.6□□□□□ -0.39
PRKCD-201ENST00000330452 NDUFC2O95298 119 aa12.6□□□□□ -0.39
PRKCD-201ENST00000330452 USMG5Q96IX5 58 aa12.6□□□□□ -0.39
PRKCD-201ENST00000330452 PHLDA3Q9Y5J5 127 aa12.6□□□□□ -0.39
PRKCD-201ENST00000330452 SERP1Q9Y6X1 66 aa12.6□□□□□ -0.39
PRKCD-201ENST00000330452 USP17L23D6RBM5 183 aa12.58□□□□□ -0.4
PRKCD-201ENST00000330452 MGPP08493 103 aa12.58□□□□□ -0.4
PRKCD-201ENST00000330452 A0A087WVE0 104 aa12.58□□□□□ -0.4
PRKCD-201ENST00000330452 FP248Q71RG6 208 aaPredicted RBP12.58□□□□□ -0.4
PRKCD-201ENST00000330452 BRK1Q8WUW1 75 aa12.58□□□□□ -0.4
PRKCD-201ENST00000330452 HIST2H2BDQ6DRA6 164 aa12.57□□□□□ -0.4
PRKCD-201ENST00000330452 DAND5Q8N907 189 aa12.57□□□□□ -0.4
PRKCD-201ENST00000330452 NACAE9PAV3 2078 aa12.57□□□□□ -0.4
PRKCD-201ENST00000330452 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
PRKCD-201ENST00000330452 MSMBP08118 114 aa12.57□□□□□ -0.4
PRKCD-201ENST00000330452 TIRAPP58753 221 aa12.57□□□□□ -0.4
PRKCD-201ENST00000330452 DAZ2Q13117 558 aaKnown RBP12.57□□□□□ -0.4
PRKCD-201ENST00000330452 DAZ4Q86SG3 579 aaKnown RBP12.57□□□□□ -0.4
PRKCD-201ENST00000330452 DAZ1Q9NQZ3 744 aaKnown RBP12.57□□□□□ -0.4
PRKCD-201ENST00000330452 DAZ3Q9NR90 486 aaKnown RBP12.57□□□□□ -0.4
PRKCD-201ENST00000330452 TP53TG1Q9Y2A0 90 aa12.57□□□□□ -0.4
PRKCD-201ENST00000330452 LEPROTO15243 131 aa12.56□□□□□ -0.4
PRKCD-201ENST00000330452 TMEM243Q9BU79 118 aa12.56□□□□□ -0.4
PRKCD-201ENST00000330452 RNASE3P12724 160 aaKnown RBP12.56□□□□□ -0.4
PRKCD-201ENST00000330452 LINC00482Q8N8I6 264 aa12.56□□□□□ -0.4
PRKCD-201ENST00000330452 WNK1Q9H4A3 2382 aa12.56□□□□□ -0.4
PRKCD-201ENST00000330452 H3BUA1 57 aa12.55□□□□□ -0.4
PRKCD-201ENST00000330452 DEFB104AQ8WTQ1 72 aa12.55□□□□□ -0.4
PRKCD-201ENST00000330452 IGKV3D-7A0A0C4DH55 119 aa12.55□□□□□ -0.4
PRKCD-201ENST00000330452 A0A0J9YXY3 114 aa12.55□□□□□ -0.4
PRKCD-201ENST00000330452 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
PRKCD-201ENST00000330452 IGIPA6NJ69 53 aa12.54□□□□□ -0.4
PRKCD-201ENST00000330452 MUC4Q99102 2169 aa12.54□□□□□ -0.4
PRKCD-201ENST00000330452 UNC79Q9P2D8 2635 aa12.54□□□□□ -0.4
PRKCD-201ENST00000330452 C10orf99Q6UWK7 81 aa12.54□□□□□ -0.4
PRKCD-201ENST00000330452 SDHAF1A6NFY7 115 aa12.53□□□□□ -0.4
PRKCD-201ENST00000330452 LITAFQ99732 161 aa12.53□□□□□ -0.4
PRKCD-201ENST00000330452 IGHV3-64A0A075B6Q5 118 aa12.53□□□□□ -0.4
PRKCD-201ENST00000330452 TRAV12-3A0A0B4J271 114 aa12.53□□□□□ -0.4
PRKCD-201ENST00000330452 CIRBPQ14011 172 aaKnown RBP12.53□□□□□ -0.4
PRKCD-201ENST00000330452 C6orf226Q5I0X4 101 aa12.53□□□□□ -0.4
PRKCD-201ENST00000330452 SMIM26A0A096LP01 95 aa12.52□□□□□ -0.41
PRKCD-201ENST00000330452 A0A0J9YX75 114 aa12.52□□□□□ -0.41
PRKCD-201ENST00000330452 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
PRKCD-201ENST00000330452 APRG1Q8IVJ8 170 aa12.52□□□□□ -0.41
PRKCD-201ENST00000330452 IGHV4-59P01825 116 aa12.51□□□□□ -0.41
PRKCD-201ENST00000330452 CFHR3Q02985 330 aa12.51□□□□□ -0.41
PRKCD-201ENST00000330452 C22orf24Q9Y442 160 aa12.51□□□□□ -0.41
PRKCD-201ENST00000330452 A0A0U1RRA0 63 aa12.5□□□□□ -0.41
PRKCD-201ENST00000330452 MED14OSP0DP75 135 aa12.5□□□□□ -0.41
PRKCD-201ENST00000330452 Q6JHZ5 121 aa12.5□□□□□ -0.41
PRKCD-201ENST00000330452 FAM19A1Q7Z5A9 133 aa12.49□□□□□ -0.41
PRKCD-201ENST00000330452 TMEM61Q8N0U2 210 aa12.49□□□□□ -0.41
PRKCD-201ENST00000330452 NOTCH3Q9UM47 2321 aa12.49□□□□□ -0.41
PRKCD-201ENST00000330452 KLLNB2CW77 178 aa12.49□□□□□ -0.41
PRKCD-201ENST00000330452 LINC00315P59091 139 aa12.49□□□□□ -0.41
PRKCD-201ENST00000330452 DEFB112Q30KQ8 113 aa12.49□□□□□ -0.41
PRKCD-201ENST00000330452 A0A087WWL8 130 aa12.48□□□□□ -0.41
PRKCD-201ENST00000330452 B4DSR2 109 aa12.48□□□□□ -0.41
PRKCD-201ENST00000330452 IGKV3-20P01619 116 aa12.48□□□□□ -0.41
PRKCD-201ENST00000330452 ADAMTSL4-AS1Q5T5F5 129 aa12.48□□□□□ -0.41
PRKCD-201ENST00000330452 ZNF580Q9UK33 172 aa12.48□□□□□ -0.41
PRKCD-201ENST00000330452 KIF25-AS1Q9Y6Z4 181 aa12.48□□□□□ -0.41
PRKCD-201ENST00000330452 RPL39P62891 51 aaKnown RBP12.48□□□□□ -0.41
PRKCD-201ENST00000330452 ADARB2-AS1A8MUL3 147 aa12.47□□□□□ -0.41
PRKCD-201ENST00000330452 INAFM2P0DMQ5 153 aa12.47□□□□□ -0.41
PRKCD-201ENST00000330452 TMEM141Q96I45 108 aa12.47□□□□□ -0.41
PRKCD-201ENST00000330452 KMT2BQ9UMN6 2715 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms