RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 TRIAP1O43715 76 aa9.83□□□□□ -0.84
TRAK1-201ENST00000327628 LY6G6DO95868 133 aa9.83□□□□□ -0.84
TRAK1-201ENST00000327628 KPRPQ5T749 579 aaPredicted RBP9.83□□□□□ -0.84
TRAK1-201ENST00000327628 LINC01561Q8N1V8 128 aa9.83□□□□□ -0.84
TRAK1-201ENST00000327628 NOTCH4Q99466 2003 aa9.82□□□□□ -0.84
TRAK1-201ENST00000327628 NRACQ8N912 160 aa9.82□□□□□ -0.84
TRAK1-201ENST00000327628 LST1O00453 97 aa9.82□□□□□ -0.84
TRAK1-201ENST00000327628 CCKP06307 115 aa9.82□□□□□ -0.84
TRAK1-201ENST00000327628 C6orf99Q4VX62 202 aa9.82□□□□□ -0.84
TRAK1-201ENST00000327628 CACNA1BQ00975 2339 aa9.82□□□□□ -0.84
TRAK1-201ENST00000327628 PCNX1Q96RV3 2341 aa9.82□□□□□ -0.84
TRAK1-201ENST00000327628 UBE2D3P61077 147 aa9.82□□□□□ -0.84
TRAK1-201ENST00000327628 UBE2D2P62837 147 aa9.82□□□□□ -0.84
TRAK1-201ENST00000327628 FAM19A5Q7Z5A7 132 aaPredicted RBP9.82□□□□□ -0.84
TRAK1-201ENST00000327628 NUP210LQ5VU65 1888 aa9.81□□□□□ -0.84
TRAK1-201ENST00000327628 CRIP1P50238 77 aa9.81□□□□□ -0.84
TRAK1-201ENST00000327628 EGFEM1PQ0D2K5 195 aa9.81□□□□□ -0.84
TRAK1-201ENST00000327628 RNASE3P12724 160 aaKnown RBP9.81□□□□□ -0.84
TRAK1-201ENST00000327628 Q6ZPA2 131 aa9.81□□□□□ -0.84
TRAK1-201ENST00000327628 FAM19A3Q7Z5A8 133 aa9.81□□□□□ -0.84
TRAK1-201ENST00000327628 SERP2Q8N6R1 65 aa9.81□□□□□ -0.84
TRAK1-201ENST00000327628 RNASE8Q8TDE3 154 aaKnown RBP9.81□□□□□ -0.84
TRAK1-201ENST00000327628 TNRC6BQ9UPQ9 1833 aaKnown RBP9.81□□□□□ -0.84
TRAK1-201ENST00000327628 MED13LQ71F56 2210 aa9.8□□□□□ -0.84
TRAK1-201ENST00000327628 BBC3Q96PG8 261 aaPredicted RBP9.8□□□□□ -0.84
TRAK1-201ENST00000327628 C16orf95Q9H693 158 aa9.8□□□□□ -0.84
TRAK1-201ENST00000327628 KIF26AQ9ULI4 1882 aaPredicted RBP9.8□□□□□ -0.84
TRAK1-201ENST00000327628 Q6JHZ5 121 aa9.8□□□□□ -0.84
TRAK1-201ENST00000327628 ADAMTS9Q9P2N4 1935 aa9.79□□□□□ -0.84
TRAK1-201ENST00000327628 C1orf229Q6ZS94 237 aaPredicted RBP9.79□□□□□ -0.84
TRAK1-201ENST00000327628 RPL28P46779 137 aaKnown RBP9.79□□□□□ -0.84
TRAK1-201ENST00000327628 DCANP1Q8TF63 244 aa9.79□□□□□ -0.84
TRAK1-201ENST00000327628 ZNF73O43830 326 aaPredicted RBP9.78□□□□□ -0.84
TRAK1-201ENST00000327628 FRMD6-AS1P0C7T7 363 aa9.78□□□□□ -0.84
TRAK1-201ENST00000327628 C20orf197Q8N268 126 aa9.78□□□□□ -0.84
TRAK1-201ENST00000327628 YPEL4Q96NS1 127 aa9.78□□□□□ -0.84
TRAK1-201ENST00000327628 SERP1Q9Y6X1 66 aa9.78□□□□□ -0.84
TRAK1-201ENST00000327628 ENHOQ6UWT2 76 aa9.78□□□□□ -0.84
TRAK1-201ENST00000327628 COL4A4P53420 1690 aaPredicted RBP9.78□□□□□ -0.84
TRAK1-201ENST00000327628 DYSFO75923 2080 aa9.77□□□□□ -0.85
TRAK1-201ENST00000327628 TEX49A0A1B0GTD5 131 aa9.77□□□□□ -0.85
TRAK1-201ENST00000327628 CSDC2Q9Y534 153 aaKnown RBP9.77□□□□□ -0.85
TRAK1-201ENST00000327628 GTF3C1Q12789 2109 aa9.77□□□□□ -0.85
TRAK1-201ENST00000327628 Q6Q795 121 aa9.77□□□□□ -0.85
TRAK1-201ENST00000327628 Q8N9L7 120 aa9.77□□□□□ -0.85
TRAK1-201ENST00000327628 C2orf16Q68DN1 1984 aa9.77□□□□□ -0.85
TRAK1-201ENST00000327628 KIAA1549LQ6ZVL6 1849 aa9.77□□□□□ -0.85
TRAK1-201ENST00000327628 C10orf142B7Z368 130 aa9.76□□□□□ -0.85
TRAK1-201ENST00000327628 COX8CQ7Z4L0 72 aa9.76□□□□□ -0.85
TRAK1-201ENST00000327628 COL6A6A6NMZ7 2263 aa9.76□□□□□ -0.85
TRAK1-201ENST00000327628 SDIM1Q6ZPB5 146 aa9.76□□□□□ -0.85
TRAK1-201ENST00000327628 CDC42SE2Q9NRR3 84 aa9.76□□□□□ -0.85
TRAK1-201ENST00000327628 NACAE9PAV3 2078 aa9.75□□□□□ -0.85
TRAK1-201ENST00000327628 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.75□□□□□ -0.856e-7■■■□□ 15.4
TRAK1-201ENST00000327628 PLCE1Q9P212 2302 aa9.75□□□□□ -0.85
TRAK1-201ENST00000327628 C10orf25Q5T742 122 aa9.75□□□□□ -0.85
TRAK1-201ENST00000327628 PLAC8L1A1L4L8 177 aa9.74□□□□□ -0.85
TRAK1-201ENST00000327628 Q6ZQY7 126 aa9.74□□□□□ -0.85
TRAK1-201ENST00000327628 BRK1Q8WUW1 75 aa9.74□□□□□ -0.85
TRAK1-201ENST00000327628 XAGE1AQ9HD64 81 aa9.74□□□□□ -0.85
TRAK1-201ENST00000327628 LINC00482Q8N8I6 264 aa9.73□□□□□ -0.85
TRAK1-201ENST00000327628 WISP2O76076 250 aa9.73□□□□□ -0.85
TRAK1-201ENST00000327628 MAPKAPK5-AS1Q8N8E1 139 aa9.73□□□□□ -0.85
TRAK1-201ENST00000327628 C1orf158Q8N1D5 194 aa9.72□□□□□ -0.85
TRAK1-201ENST00000327628 C2orf48Q96LS8 159 aa9.72□□□□□ -0.85
TRAK1-201ENST00000327628 IGLV1-51P01701 117 aa9.71□□□□□ -0.85
TRAK1-201ENST00000327628 PLA2G2AP14555 144 aa9.71□□□□□ -0.86
TRAK1-201ENST00000327628 SMIM11BQ8TCY0 68 aa9.71□□□□□ -0.86
TRAK1-201ENST00000327628 ALPK3Q96L96 1907 aa9.71□□□□□ -0.86
TRAK1-201ENST00000327628 WFDC10BQ8IUB3 73 aa9.71□□□□□ -0.86
TRAK1-201ENST00000327628 MT-ATP8P03928 68 aa9.7□□□□□ -0.86
TRAK1-201ENST00000327628 COX7CP15954 63 aa9.7□□□□□ -0.86
TRAK1-201ENST00000327628 C22orf34Q6ZV56 151 aa9.7□□□□□ -0.86
TRAK1-201ENST00000327628 SVIPQ8NHG7 77 aa9.7□□□□□ -0.86
TRAK1-201ENST00000327628 IGIPA6NJ69 53 aa9.7□□□□□ -0.86
TRAK1-201ENST00000327628 MED13Q9UHV7 2174 aa9.69□□□□□ -0.86
TRAK1-201ENST00000327628 MRPS12O15235 138 aaKnown RBP9.69□□□□□ -0.86
TRAK1-201ENST00000327628 MUC22E2RYF6 1773 aaPredicted RBP9.69□□□□□ -0.86
TRAK1-201ENST00000327628 PRYO14603 147 aa9.69□□□□□ -0.86
TRAK1-201ENST00000327628 SLPIP03973 132 aa9.69□□□□□ -0.86
TRAK1-201ENST00000327628 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.69□□□□□ -0.86
TRAK1-201ENST00000327628 IGHV4-30-4P0DP06 118 aa9.68□□□□□ -0.86
TRAK1-201ENST00000327628 PRR9Q5T870 116 aa9.68□□□□□ -0.86
TRAK1-201ENST00000327628 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
TRAK1-201ENST00000327628 ATRXP46100 2492 aa9.67□□□□□ -0.86
TRAK1-201ENST00000327628 A0A1B0GUV1 79 aa9.67□□□□□ -0.86
TRAK1-201ENST00000327628 NHLRC4P0CG21 123 aaPredicted RBP9.67□□□□□ -0.86
TRAK1-201ENST00000327628 BEAN1Q3B7T3 259 aa9.67□□□□□ -0.86
TRAK1-201ENST00000327628 TRAV7A0A075B6U4 112 aa9.67□□□□□ -0.86
TRAK1-201ENST00000327628 M0QXV9 152 aa9.67□□□□□ -0.86
TRAK1-201ENST00000327628 REG3GQ6UW15 175 aa9.67□□□□□ -0.86
TRAK1-201ENST00000327628 C11orf21Q9P2W6 132 aa9.67□□□□□ -0.86
TRAK1-201ENST00000327628 SRCAPQ6ZRS2 3230 aa9.67□□□□□ -0.86
TRAK1-201ENST00000327628 CYSRT1A8MQ03 144 aa9.66□□□□□ -0.86
TRAK1-201ENST00000327628 C2orf91Q6ZV80 131 aa9.66□□□□□ -0.86
TRAK1-201ENST00000327628 PROK1P58294 105 aa9.66□□□□□ -0.86
TRAK1-201ENST00000327628 NTM-AS1Q6ZSK4 140 aa9.66□□□□□ -0.86
TRAK1-201ENST00000327628 IGKV2-28A0A075B6P5 120 aa9.66□□□□□ -0.86
TRAK1-201ENST00000327628 IGKV2D-28P01615 120 aa9.66□□□□□ -0.86
TRAK1-201ENST00000327628 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms