RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 ZNF727A8MUV8 499 aa13.34□□□□□ -0.27
ME3-201ENST00000323418 AMN1Q8IY45 258 aa13.34□□□□□ -0.27
ME3-201ENST00000323418 BORCS7Q96B45 105 aa13.34□□□□□ -0.27
ME3-201ENST00000323418 PHOX2AO14813 284 aa13.33□□□□□ -0.28
ME3-201ENST00000323418 CCL25O15444 150 aa13.33□□□□□ -0.28
ME3-201ENST00000323418 MRAP2Q96G30 205 aa13.33□□□□□ -0.28
ME3-201ENST00000323418 CDC42SE2Q9NRR3 84 aa13.33□□□□□ -0.28
ME3-201ENST00000323418 A0A096LNI7 61 aa13.32□□□□□ -0.28
ME3-201ENST00000323418 XCL1P47992 114 aa13.32□□□□□ -0.28
ME3-201ENST00000323418 BTF3L4Q96K17 158 aa13.32□□□□□ -0.28
ME3-201ENST00000323418 NRACQ8N912 160 aa13.31□□□□□ -0.28
ME3-201ENST00000323418 NUP35Q8NFH5 326 aa13.31□□□□□ -0.28
ME3-201ENST00000323418 ISOC2Q96AB3 205 aa13.31□□□□□ -0.28
ME3-201ENST00000323418 DPH3Q96FX2 82 aa13.31□□□□□ -0.28
ME3-201ENST00000323418 TMEM101Q96IK0 257 aa13.31□□□□□ -0.28
ME3-201ENST00000323418 UBR4Q5T4S7 5183 aa13.3□□□□□ -0.28
ME3-201ENST00000323418 IGKV2-24A0A0C4DH68 120 aa13.3□□□□□ -0.28
ME3-201ENST00000323418 SMKR1H3BMG3 65 aa13.3□□□□□ -0.28
ME3-201ENST00000323418 MAJINQ3KP22 176 aa13.3□□□□□ -0.28
ME3-201ENST00000323418 LINC00526Q96FQ7 95 aa13.3□□□□□ -0.28
ME3-201ENST00000323418 PLA2G2DQ9UNK4 145 aa13.3□□□□□ -0.28
ME3-201ENST00000323418 IGHV1-58A0A0C4DH39 117 aa13.29□□□□□ -0.28
ME3-201ENST00000323418 C7orf77A4D0Y5 90 aa13.29□□□□□ -0.28
ME3-201ENST00000323418 RPL23P62829 140 aaKnown RBP13.28□□□□□ -0.28
ME3-201ENST00000323418 ZNF664Q8N3J9 261 aa13.28□□□□□ -0.28
ME3-201ENST00000323418 STPG4Q8N801 248 aa13.28□□□□□ -0.28
ME3-201ENST00000323418 RIGQ13278 110 aa13.27□□□□□ -0.29
ME3-201ENST00000323418 CD164L2Q6UWJ8 174 aa13.27□□□□□ -0.29
ME3-201ENST00000323418 C9JQL5 133 aa13.26□□□□□ -0.29
ME3-201ENST00000323418 PRR3P79522 188 aaKnown RBP13.26□□□□□ -0.29
ME3-201ENST00000323418 SS18Q15532 418 aa13.26□□□□□ -0.29
ME3-201ENST00000323418 C7orf33Q8WU49 177 aa13.26□□□□□ -0.29
ME3-201ENST00000323418 CARD19Q96LW7 228 aa13.26□□□□□ -0.29
ME3-201ENST00000323418 UBE2D4Q9Y2X8 147 aa13.26□□□□□ -0.29
ME3-201ENST00000323418 CSDC2Q9Y534 153 aaKnown RBP13.26□□□□□ -0.29
ME3-201ENST00000323418 SUMO2P61956 95 aaKnown RBP13.25□□□□□ -0.29
ME3-201ENST00000323418 VCYO14598 125 aa13.24□□□□□ -0.29
ME3-201ENST00000323418 TMEM241Q24JQ0 296 aa13.24□□□□□ -0.29
ME3-201ENST00000323418 MRPL51Q4U2R6 128 aaKnown RBP13.24□□□□□ -0.29
ME3-201ENST00000323418 A0A1B0GVG6 124 aa13.23□□□□□ -0.29
ME3-201ENST00000323418 SMIM27A0A1W2PRY6 76 aa13.23□□□□□ -0.29
ME3-201ENST00000323418 FAM74A3Q4VXF1 159 aa13.23□□□□□ -0.29
ME3-201ENST00000323418 FAM104BQ5XKR9 115 aa13.23□□□□□ -0.29
ME3-201ENST00000323418 NAT8BQ9UHF3 227 aa13.23□□□□□ -0.29
ME3-201ENST00000323418 SRSF3P84103 164 aaKnown RBP13.22□□□□□ -0.29
ME3-201ENST00000323418 PPP1R17O96001 155 aa13.21□□□□□ -0.29
ME3-201ENST00000323418 SYCNQ0VAF6 134 aa13.21□□□□□ -0.29
ME3-201ENST00000323418 RNASE13Q5GAN3 156 aaKnown RBP13.21□□□□□ -0.29
ME3-201ENST00000323418 LINC00474Q9P2X8 69 aa13.21□□□□□ -0.29
ME3-201ENST00000323418 FCER1GP30273 86 aa13.2□□□□□ -0.3
ME3-201ENST00000323418 ADIRFQ15847 76 aa13.2□□□□□ -0.3
ME3-201ENST00000323418 Q6ZUT4 128 aa13.2□□□□□ -0.3
ME3-201ENST00000323418 FAM104AQ969W3 186 aa13.2□□□□□ -0.3
ME3-201ENST00000323418 NAT8Q9UHE5 227 aa13.2□□□□□ -0.3
ME3-201ENST00000323418 TRBV24-1A0A075B6N3 115 aa13.19□□□□□ -0.3
ME3-201ENST00000323418 C1orf196B1AJZ1 125 aa13.19□□□□□ -0.3
ME3-201ENST00000323418 ZNF561-AS1K7EIQ3 104 aa13.19□□□□□ -0.3
ME3-201ENST00000323418 PPP1R2P9O14990 202 aa13.19□□□□□ -0.3
ME3-201ENST00000323418 CAMPP49913 170 aa13.19□□□□□ -0.3
ME3-201ENST00000323418 RPL32P62910 135 aaKnown RBP13.19□□□□□ -0.3
ME3-201ENST00000323418 TIMM21Q9BVV7 248 aa13.19□□□□□ -0.3
ME3-201ENST00000323418 PKIGQ9Y2B9 76 aa13.19□□□□□ -0.3
ME3-201ENST00000323418 IGLV4-69A0A075B6H9 119 aa13.18□□□□□ -0.3
ME3-201ENST00000323418 KIR2DL4Q99706 377 aa13.18□□□□□ -0.3
ME3-201ENST00000323418 LINC00862A6NCI5 91 aa13.17□□□□□ -0.3
ME3-201ENST00000323418 PTTG1IPP53801 180 aa13.17□□□□□ -0.3
ME3-201ENST00000323418 LINC01600Q96MT4 127 aa13.17□□□□□ -0.3
ME3-201ENST00000323418 C20orf78Q9BR46 151 aa13.17□□□□□ -0.3
ME3-201ENST00000323418 COX7A2LO14548 114 aa13.16□□□□□ -0.3
ME3-201ENST00000323418 A0A1B0GXF2 115 aa13.15□□□□□ -0.3
ME3-201ENST00000323418 SMAGPQ0VAQ4 97 aa13.15□□□□□ -0.3
ME3-201ENST00000323418 TRAV13-1A0A0B4J241 112 aa13.14□□□□□ -0.31
ME3-201ENST00000323418 A0A1B0GW15 77 aa13.14□□□□□ -0.31
ME3-201ENST00000323418 LOC107984640A0A0U1RRK4 108 aa13.13□□□□□ -0.31
ME3-201ENST00000323418 TNFRSF6BO95407 300 aa13.13□□□□□ -0.31
ME3-201ENST00000323418 MALP21145 153 aa13.13□□□□□ -0.31
ME3-201ENST00000323418 RPL39P62891 51 aaKnown RBP13.13□□□□□ -0.31
ME3-201ENST00000323418 SRSF9Q13242 221 aaKnown RBP eCLIP13.13□□□□□ -0.31
ME3-201ENST00000323418 C5orf38Q86SI9 138 aa13.13□□□□□ -0.31
ME3-201ENST00000323418 C2orf48Q96LS8 159 aa13.13□□□□□ -0.31
ME3-201ENST00000323418 SMIM2Q9BVW6 85 aa13.13□□□□□ -0.31
ME3-201ENST00000323418 A0A1W2PNN7 141 aa13.12□□□□□ -0.31
ME3-201ENST00000323418 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.12□□□□□ -0.31
ME3-201ENST00000323418 CKS2P33552 79 aa13.12□□□□□ -0.31
ME3-201ENST00000323418 SMDT1Q9H4I9 107 aa13.12□□□□□ -0.31
ME3-201ENST00000323418 NPYP01303 97 aa13.11□□□□□ -0.31
ME3-201ENST00000323418 GAGE2BQ13066 116 aa13.11□□□□□ -0.31
ME3-201ENST00000323418 PEA15Q15121 130 aa13.11□□□□□ -0.31
ME3-201ENST00000323418 SPINK6Q6UWN8 80 aa13.11□□□□□ -0.31
ME3-201ENST00000323418 TMEM18Q96B42 140 aa13.11□□□□□ -0.31
ME3-201ENST00000323418 CAMK2N2Q96S95 79 aa13.11□□□□□ -0.31
ME3-201ENST00000323418 D6R8Y8 96 aa13.1□□□□□ -0.31
ME3-201ENST00000323418 APOMO95445 188 aa13.1□□□□□ -0.31
ME3-201ENST00000323418 HBBP68871 147 aa13.1□□□□□ -0.31
ME3-201ENST00000323418 ODF1Q14990 250 aa13.1□□□□□ -0.31
ME3-201ENST00000323418 MRPL54Q6P161 138 aaKnown RBP13.1□□□□□ -0.31
ME3-201ENST00000323418 LRP2P98164 4655 aa13.1□□□□□ -0.31
ME3-201ENST00000323418 A0A0J9YXV3 536 aa13.09□□□□□ -0.31
ME3-201ENST00000323418 Q6ZRP5 223 aa13.09□□□□□ -0.31
ME3-201ENST00000323418 OPRPNQ99935 248 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms