RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PAX4O43316 350 aa12.5□□□□□ -0.41
RAB39A-201ENST00000320578 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
RAB39A-201ENST00000320578 KPRPQ5T749 579 aaPredicted RBP12.5□□□□□ -0.41
RAB39A-201ENST00000320578 ATP6V0E2Q8NHE4 81 aa12.5□□□□□ -0.41
RAB39A-201ENST00000320578 CHAC1Q9BUX1 264 aa12.5□□□□□ -0.41
RAB39A-201ENST00000320578 Q6ZUT4 128 aa12.49□□□□□ -0.41
RAB39A-201ENST00000320578 DNAH3Q8TD57 4116 aa12.49□□□□□ -0.41
RAB39A-201ENST00000320578 TINCRA0A1B0GVN0 87 aa12.48□□□□□ -0.41
RAB39A-201ENST00000320578 FAM19A3Q7Z5A8 133 aa12.48□□□□□ -0.41
RAB39A-201ENST00000320578 TP73-AS1Q9UF72 201 aa12.48□□□□□ -0.41
RAB39A-201ENST00000320578 TRAV26-1A0A087WT03 109 aa12.48□□□□□ -0.41
RAB39A-201ENST00000320578 A0A0J9YXV3 536 aa12.48□□□□□ -0.41
RAB39A-201ENST00000320578 UBE2L6O14933 153 aa12.48□□□□□ -0.41
RAB39A-201ENST00000320578 TCTAP57738 103 aa12.48□□□□□ -0.41
RAB39A-201ENST00000320578 ZNF22P17026 224 aaPredicted RBP12.47□□□□□ -0.41
RAB39A-201ENST00000320578 ANK2Q01484 3957 aa12.47□□□□□ -0.41
RAB39A-201ENST00000320578 TMEM170BQ5T4T1 132 aa12.47□□□□□ -0.41
RAB39A-201ENST00000320578 VSIG2Q96IQ7 327 aa12.47□□□□□ -0.41
RAB39A-201ENST00000320578 CDC42SE2Q9NRR3 84 aa12.47□□□□□ -0.41
RAB39A-201ENST00000320578 TMEM223A0PJW6 202 aa12.46□□□□□ -0.41
RAB39A-201ENST00000320578 UBE2D1P51668 147 aa12.46□□□□□ -0.41
RAB39A-201ENST00000320578 TIRAPP58753 221 aa12.46□□□□□ -0.41
RAB39A-201ENST00000320578 OR5A1Q8NGJ0 315 aa12.46□□□□□ -0.41
RAB39A-201ENST00000320578 TMEM101Q96IK0 257 aa12.46□□□□□ -0.41
RAB39A-201ENST00000320578 SEC11AP67812 179 aa12.46□□□□□ -0.42
RAB39A-201ENST00000320578 AMMECR1LQ6DCA0 310 aa12.46□□□□□ -0.42
RAB39A-201ENST00000320578 SH2D6Q7Z4S9 175 aa12.46□□□□□ -0.42
RAB39A-201ENST00000320578 NBEAL2Q6ZNJ1 2754 aa12.45□□□□□ -0.42
RAB39A-201ENST00000320578 TRAV8-6A0A0B4J262 113 aa12.45□□□□□ -0.42
RAB39A-201ENST00000320578 MYMXA0A1B0GTQ4 84 aa12.45□□□□□ -0.42
RAB39A-201ENST00000320578 COL5A1-AS1Q5SY13 56 aa12.44□□□□□ -0.42
RAB39A-201ENST00000320578 MAPKAPK5-AS1Q8N8E1 139 aa12.44□□□□□ -0.42
RAB39A-201ENST00000320578 MDFIQ99750 246 aa12.44□□□□□ -0.42
RAB39A-201ENST00000320578 IGLV5-45A0A087WSX0 123 aa12.44□□□□□ -0.42
RAB39A-201ENST00000320578 HINT1P49773 126 aaPredicted RBP12.44□□□□□ -0.42
RAB39A-201ENST00000320578 HSD52Q0P140 79 aa12.44□□□□□ -0.42
RAB39A-201ENST00000320578 C12orf74Q32Q52 190 aa12.44□□□□□ -0.42
RAB39A-201ENST00000320578 MPV17L2Q567V2 206 aa12.44□□□□□ -0.42
RAB39A-201ENST00000320578 F5H768 121 aa12.43□□□□□ -0.42
RAB39A-201ENST00000320578 LEPROTO15243 131 aa12.43□□□□□ -0.42
RAB39A-201ENST00000320578 BVES-AS1Q5T3Y7 98 aa12.43□□□□□ -0.42
RAB39A-201ENST00000320578 TTTY13Q9BZ97 58 aa12.43□□□□□ -0.42
RAB39A-201ENST00000320578 RETNQ9HD89 108 aa12.43□□□□□ -0.42
RAB39A-201ENST00000320578 PKD1L1Q8TDX9 2849 aa12.43□□□□□ -0.42
RAB39A-201ENST00000320578 H3BNG1 76 aa12.42□□□□□ -0.42
RAB39A-201ENST00000320578 MRPL23Q16540 153 aaKnown RBP12.42□□□□□ -0.42
RAB39A-201ENST00000320578 RNASE13Q5GAN3 156 aaKnown RBP12.42□□□□□ -0.42
RAB39A-201ENST00000320578 PLEKHB2Q96CS7 222 aa12.41□□□□□ -0.42
RAB39A-201ENST00000320578 A0A1B0GUV1 79 aa12.41□□□□□ -0.42
RAB39A-201ENST00000320578 HERVK_113P63121 156 aa12.41□□□□□ -0.42
RAB39A-201ENST00000320578 BATFQ16520 125 aa12.41□□□□□ -0.42
RAB39A-201ENST00000320578 TAL2Q16559 108 aa12.41□□□□□ -0.42
RAB39A-201ENST00000320578 CHCHD5Q9BSY4 110 aa12.41□□□□□ -0.42
RAB39A-201ENST00000320578 GEMIN7Q9H840 131 aaKnown RBP12.41□□□□□ -0.42
RAB39A-201ENST00000320578 K7EIL1 84 aa12.4□□□□□ -0.42
RAB39A-201ENST00000320578 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
RAB39A-201ENST00000320578 J3QQQ9 107 aa12.39□□□□□ -0.43
RAB39A-201ENST00000320578 GAGE6Q13070 117 aa12.39□□□□□ -0.43
RAB39A-201ENST00000320578 ICOSQ9Y6W8 199 aa12.39□□□□□ -0.43
RAB39A-201ENST00000320578 A0A0J9YY99 117 aa12.39□□□□□ -0.43
RAB39A-201ENST00000320578 ZNF815PA8K554 130 aa12.39□□□□□ -0.43
RAB39A-201ENST00000320578 H3BRM9 83 aa12.39□□□□□ -0.43
RAB39A-201ENST00000320578 LINC00242Q5T6M2 205 aa12.39□□□□□ -0.43
RAB39A-201ENST00000320578 TM2D3Q9BRN9 247 aa12.39□□□□□ -0.43
RAB39A-201ENST00000320578 IGHV1-58A0A0C4DH39 117 aa12.37□□□□□ -0.43
RAB39A-201ENST00000320578 LGALS3P17931 250 aaKnown RBP12.37□□□□□ -0.43
RAB39A-201ENST00000320578 LINC00469Q8N7U9 141 aa12.37□□□□□ -0.43
RAB39A-201ENST00000320578 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
RAB39A-201ENST00000320578 ORAOV1Q8WV07 137 aa12.36□□□□□ -0.43
RAB39A-201ENST00000320578 HTN3P15516 51 aa12.35□□□□□ -0.43
RAB39A-201ENST00000320578 IGLV4-60A0A075B6I1 120 aa12.34□□□□□ -0.43
RAB39A-201ENST00000320578 A0A096LPF7 62 aa12.34□□□□□ -0.43
RAB39A-201ENST00000320578 IGHV3-30-3P0DP02 117 aa12.34□□□□□ -0.43
RAB39A-201ENST00000320578 TM2D2Q9BX73 214 aa12.34□□□□□ -0.43
RAB39A-201ENST00000320578 CDKN2A-AS1Q9UH64 79 aa12.34□□□□□ -0.43
RAB39A-201ENST00000320578 TRAV13-1A0A0B4J241 112 aa12.34□□□□□ -0.43
RAB39A-201ENST00000320578 A0A0J9YWU9 116 aa12.34□□□□□ -0.43
RAB39A-201ENST00000320578 LELP1Q5T871 98 aa12.34□□□□□ -0.43
RAB39A-201ENST00000320578 CCL25O15444 150 aa12.33□□□□□ -0.44
RAB39A-201ENST00000320578 COX6A2Q02221 97 aa12.33□□□□□ -0.44
RAB39A-201ENST00000320578 IGLV5-39A0A0G2JS06 123 aa12.32□□□□□ -0.44
RAB39A-201ENST00000320578 RBX1P62877 108 aa12.32□□□□□ -0.44
RAB39A-201ENST00000320578 SCGB1D4Q6XE38 83 aa12.32□□□□□ -0.44
RAB39A-201ENST00000320578 C11orf45Q8TAV5 145 aa12.32□□□□□ -0.44
RAB39A-201ENST00000320578 A0A1B0GV90 55 aa12.32□□□□□ -0.44
RAB39A-201ENST00000320578 A6NDN8 102 aa12.32□□□□□ -0.44
RAB39A-201ENST00000320578 Q6ZTC4 211 aa12.32□□□□□ -0.44
RAB39A-201ENST00000320578 CEND1Q8N111 149 aa12.32□□□□□ -0.44
RAB39A-201ENST00000320578 SPANXB1Q9NS25 103 aaPredicted RBP12.32□□□□□ -0.44
RAB39A-201ENST00000320578 TMEM262E9PQX1 116 aa12.31□□□□□ -0.44
RAB39A-201ENST00000320578 PRB2P02812 416 aaPredicted RBP12.31□□□□□ -0.44
RAB39A-201ENST00000320578 DEFB121Q5J5C9 76 aa12.3□□□□□ -0.44
RAB39A-201ENST00000320578 TRAV8-3A0A0A6YYJ7 113 aa12.3□□□□□ -0.44
RAB39A-201ENST00000320578 SPINK8P0C7L1 97 aa12.3□□□□□ -0.44
RAB39A-201ENST00000320578 ZFAND6Q6FIF0 208 aa12.3□□□□□ -0.44
RAB39A-201ENST00000320578 HIST1H4GQ99525 98 aa12.3□□□□□ -0.44
RAB39A-201ENST00000320578 IGHV3-64A0A075B6Q5 118 aa12.28□□□□□ -0.44
RAB39A-201ENST00000320578 NOTCH1P46531 2555 aa12.28□□□□□ -0.44
RAB39A-201ENST00000320578 LINC00959A0A1B0GUT2 108 aa12.27□□□□□ -0.44
RAB39A-201ENST00000320578 SMIM1B2RUZ4 78 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms