RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 SNCGO76070 127 aa12□□□□□ -0.49
SSH3-201ENST00000308127 MIAQ16674 131 aa12□□□□□ -0.49
SSH3-201ENST00000308127 VPREB3Q9UKI3 123 aa12□□□□□ -0.49
SSH3-201ENST00000308127 FLNAP21333 2647 aaKnown RBP12□□□□□ -0.49
SSH3-201ENST00000308127 ITPR3Q14573 2671 aa12□□□□□ -0.49
SSH3-201ENST00000308127 TRAV8-4A0A0B4J246 113 aa11.99□□□□□ -0.49
SSH3-201ENST00000308127 A0A1W2PRX2 142 aa11.99□□□□□ -0.49
SSH3-201ENST00000308127 LINC01356Q8N9X3 169 aa11.99□□□□□ -0.49
SSH3-201ENST00000308127 PYGO1Q9Y3Y4 419 aa11.99□□□□□ -0.49
SSH3-201ENST00000308127 TRBV10-2A0A0K0K1G8 114 aa11.99□□□□□ -0.49
SSH3-201ENST00000308127 UBE2WQ96B02 151 aa11.99□□□□□ -0.49
SSH3-201ENST00000308127 GCN1Q92616 2671 aaKnown RBP11.98□□□□□ -0.49
SSH3-201ENST00000308127 TRBV30A0A0K0K1B3 111 aa11.98□□□□□ -0.49
SSH3-201ENST00000308127 TMEM101Q96IK0 257 aa11.98□□□□□ -0.49
SSH3-201ENST00000308127 B5MCH6 92 aa11.98□□□□□ -0.49
SSH3-201ENST00000308127 C15orf53Q8NAA6 179 aa11.98□□□□□ -0.49
SSH3-201ENST00000308127 Q9H8V8 135 aa11.98□□□□□ -0.49
SSH3-201ENST00000308127 TMEM262E9PQX1 116 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 ZNF415Q09FC8 603 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 GAGE2EQ4V326 116 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 CITED1Q99966 193 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 MAP6D1Q9H9H5 199 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 GAGE2DQ9UEU5 116 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 TINCRA0A1B0GVN0 87 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 PRB1P04280 392 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 DYNLRB2Q8TF09 96 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 APCP25054 2843 aa11.97□□□□□ -0.49
SSH3-201ENST00000308127 TRGV1A0A0A0MS02 117 aa11.96□□□□□ -0.49
SSH3-201ENST00000308127 TMEM89A2RUT3 159 aa11.96□□□□□ -0.49
SSH3-201ENST00000308127 NHLRC4P0CG21 123 aaPredicted RBP11.96□□□□□ -0.49
SSH3-201ENST00000308127 IGKV3OR2-268A0A0C4DH90 116 aa11.96□□□□□ -0.5
SSH3-201ENST00000308127 C11orf72Q8NBR9 251 aa11.95□□□□□ -0.5
SSH3-201ENST00000308127 USP24Q9UPU5 2620 aa11.95□□□□□ -0.5
SSH3-201ENST00000308127 Q8N2B8 174 aa11.95□□□□□ -0.5
SSH3-201ENST00000308127 KRTAP10-9P60411 292 aa11.94□□□□□ -0.5
SSH3-201ENST00000308127 COX6CP09669 75 aa11.94□□□□□ -0.5
SSH3-201ENST00000308127 CITED2Q99967 270 aaPredicted RBP11.94□□□□□ -0.5
SSH3-201ENST00000308127 SPANXDQ9BXN6 97 aa11.94□□□□□ -0.5
SSH3-201ENST00000308127 SPANXCQ9NY87 97 aa11.94□□□□□ -0.5
SSH3-201ENST00000308127 SPANXA1Q9NS26 97 aa11.93□□□□□ -0.5
SSH3-201ENST00000308127 CCDC179H3BU77 68 aa11.93□□□□□ -0.5
SSH3-201ENST00000308127 C3orf56Q8N813 242 aa11.93□□□□□ -0.5
SSH3-201ENST00000308127 SOSTDC1Q6X4U4 206 aa11.92□□□□□ -0.5
SSH3-201ENST00000308127 GAGE12JA6NER3 117 aa11.92□□□□□ -0.5
SSH3-201ENST00000308127 PLA2G2AP14555 144 aa11.92□□□□□ -0.5
SSH3-201ENST00000308127 GAGE4Q13068 117 aa11.92□□□□□ -0.5
SSH3-201ENST00000308127 GAGE5Q13069 117 aa11.92□□□□□ -0.5
SSH3-201ENST00000308127 LINC00242Q5T6M2 205 aa11.92□□□□□ -0.5
SSH3-201ENST00000308127 Q6ZTI0 123 aa11.92□□□□□ -0.5
SSH3-201ENST00000308127 NDUFV3P56181 108 aaKnown RBP11.91□□□□□ -0.5
SSH3-201ENST00000308127 MEIG1Q5JSS6 88 aa11.91□□□□□ -0.5
SSH3-201ENST00000308127 Q6YL49 198 aa11.91□□□□□ -0.5
SSH3-201ENST00000308127 PIK3CD-AS1Q5SR53 167 aa11.91□□□□□ -0.5
SSH3-201ENST00000308127 A0A096LNT2 108 aa11.9□□□□□ -0.5
SSH3-201ENST00000308127 LST1O00453 97 aa11.9□□□□□ -0.5
SSH3-201ENST00000308127 LINC00308Q8TCZ7 52 aa11.9□□□□□ -0.5
SSH3-201ENST00000308127 INSP01308 110 aa11.89□□□□□ -0.51
SSH3-201ENST00000308127 WFDC10AQ9H1F0 79 aa11.89□□□□□ -0.51
SSH3-201ENST00000308127 PRIMA1Q86XR5 153 aa11.89□□□□□ -0.51
SSH3-201ENST00000308127 LOC100131303A0A0U1RQF7 123 aa11.89□□□□□ -0.51
SSH3-201ENST00000308127 ODF3L2Q3SX64 289 aa11.89□□□□□ -0.51
SSH3-201ENST00000308127 NTM-AS1Q6ZSK4 140 aa11.89□□□□□ -0.51
SSH3-201ENST00000308127 DEFB114Q30KQ6 69 aa11.88□□□□□ -0.51
SSH3-201ENST00000308127 CR1P17927 2039 aa11.88□□□□□ -0.51
SSH3-201ENST00000308127 NDUFA1O15239 70 aa11.87□□□□□ -0.51
SSH3-201ENST00000308127 C1orf158Q8N1D5 194 aa11.87□□□□□ -0.51
SSH3-201ENST00000308127 IGHV4-31P0DP07 118 aa11.87□□□□□ -0.51
SSH3-201ENST00000308127 IFITM1P13164 125 aa11.86□□□□□ -0.51
SSH3-201ENST00000308127 YAE1D1Q9NRH1 226 aa11.86□□□□□ -0.51
SSH3-201ENST00000308127 TOMM7Q9P0U1 55 aa11.86□□□□□ -0.51
SSH3-201ENST00000308127 SMIM1B2RUZ4 78 aa11.86□□□□□ -0.51
SSH3-201ENST00000308127 RS1O15537 224 aa11.86□□□□□ -0.51
SSH3-201ENST00000308127 STHQ8IWL8 128 aa11.86□□□□□ -0.51
SSH3-201ENST00000308127 EDA2RQ9HAV5 297 aa11.86□□□□□ -0.51
SSH3-201ENST00000308127 CIRBPQ14011 172 aaKnown RBP11.85□□□□□ -0.51
SSH3-201ENST00000308127 NOP10Q9NPE3 64 aaKnown RBP11.85□□□□□ -0.51
SSH3-201ENST00000308127 PEMTQ9UBM1 199 aa11.85□□□□□ -0.51
SSH3-201ENST00000308127 GAGE6Q13070 117 aa11.85□□□□□ -0.51
SSH3-201ENST00000308127 Q96MF0 132 aa11.85□□□□□ -0.51
SSH3-201ENST00000308127 M0QXV9 152 aa11.85□□□□□ -0.51
SSH3-201ENST00000308127 RNF152Q8N8N0 203 aa11.85□□□□□ -0.51
SSH3-201ENST00000308127 CHCHD5Q9BSY4 110 aa11.85□□□□□ -0.51
SSH3-201ENST00000308127 Q9HAA7 133 aa11.85□□□□□ -0.51
SSH3-201ENST00000308127 HIVEP2P31629 2446 aa11.83□□□□□ -0.52
SSH3-201ENST00000308127 H3BT86 120 aa11.83□□□□□ -0.52
SSH3-201ENST00000308127 FAM218AQ96MZ4 157 aa11.83□□□□□ -0.52
SSH3-201ENST00000308127 BEAN1Q3B7T3 259 aa11.83□□□□□ -0.52
SSH3-201ENST00000308127 UBR5O95071 2799 aaPredicted RBP11.82□□□□□ -0.52
SSH3-201ENST00000308127 GAGE7O76087 117 aa11.82□□□□□ -0.52
SSH3-201ENST00000308127 GAGE12FP0CL80 117 aa11.82□□□□□ -0.52
SSH3-201ENST00000308127 GAGE12GP0CL81 117 aa11.82□□□□□ -0.52
SSH3-201ENST00000308127 GAGE12IP0CL82 117 aa11.82□□□□□ -0.52
SSH3-201ENST00000308127 RPL35AP18077 110 aaKnown RBP11.82□□□□□ -0.52
SSH3-201ENST00000308127 TIRAPP58753 221 aa11.82□□□□□ -0.52
SSH3-201ENST00000308127 HERVK_113P63121 156 aa11.82□□□□□ -0.52
SSH3-201ENST00000308127 C11orf68Q9H3H3 251 aaKnown RBP11.82□□□□□ -0.52
SSH3-201ENST00000308127 A8MTW9 85 aa11.81□□□□□ -0.52
SSH3-201ENST00000308127 DSCR9P59020 149 aa11.81□□□□□ -0.52
SSH3-201ENST00000308127 IGLV5-39A0A0G2JS06 123 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms