RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PRO0255Q9UI72 69 aa10.21□□□□□ -0.78
TRIM56-201ENST00000306085 MIFP14174 115 aa10.2□□□□□ -0.78
TRIM56-201ENST00000306085 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.2□□□□□ -0.78
TRIM56-201ENST00000306085 ZFHX2Q9C0A1 2572 aaPredicted RBP10.2□□□□□ -0.78
TRIM56-201ENST00000306085 I3L2K1 104 aa10.2□□□□□ -0.78
TRIM56-201ENST00000306085 TRBV6-5A0A0K0K1A5 114 aa10.2□□□□□ -0.78
TRIM56-201ENST00000306085 CRIPAKQ8N1N5 446 aa10.2□□□□□ -0.78
TRIM56-201ENST00000306085 CELA1Q9UNI1 258 aa10.2□□□□□ -0.78
TRIM56-201ENST00000306085 LINC00467Q9BRT7 94 aa10.2□□□□□ -0.78
TRIM56-201ENST00000306085 SPINK1P00995 79 aa10.2□□□□□ -0.78
TRIM56-201ENST00000306085 DNAJC9-AS1A6NH13 148 aa10.19□□□□□ -0.78
TRIM56-201ENST00000306085 PROK2Q9HC23 129 aa10.19□□□□□ -0.78
TRIM56-201ENST00000306085 TRBV10-1A0A0K0K1A3 114 aa10.19□□□□□ -0.78
TRIM56-201ENST00000306085 ESRGQ1W209 222 aa10.19□□□□□ -0.78
TRIM56-201ENST00000306085 ZNF503-AS2A6NEH8 195 aa10.19□□□□□ -0.78
TRIM56-201ENST00000306085 CSDC2Q9Y534 153 aaKnown RBP10.19□□□□□ -0.78
TRIM56-201ENST00000306085 ABCA12Q86UK0 2595 aa10.19□□□□□ -0.78
TRIM56-201ENST00000306085 ZNF706Q9Y5V0 76 aaPredicted RBP10.19□□□□□ -0.78
TRIM56-201ENST00000306085 C5orf56Q8N8D9 126 aa10.18□□□□□ -0.78
TRIM56-201ENST00000306085 C20orf203Q8NBC4 194 aa10.18□□□□□ -0.78
TRIM56-201ENST00000306085 IGLV11-55A0A075B6I3 123 aa10.18□□□□□ -0.78
TRIM56-201ENST00000306085 IL17DQ8TAD2 202 aa10.18□□□□□ -0.78
TRIM56-201ENST00000306085 EBI3Q14213 229 aa10.17□□□□□ -0.78
TRIM56-201ENST00000306085 SMIM26A0A096LP01 95 aa10.17□□□□□ -0.78
TRIM56-201ENST00000306085 MRPS12O15235 138 aaKnown RBP10.17□□□□□ -0.78
TRIM56-201ENST00000306085 USP9XQ93008 2570 aaPredicted RBP10.17□□□□□ -0.78
TRIM56-201ENST00000306085 COX7CP15954 63 aa10.17□□□□□ -0.78
TRIM56-201ENST00000306085 SPRY4Q9C004 299 aa10.17□□□□□ -0.78
TRIM56-201ENST00000306085 CTSZQ9UBR2 303 aa10.16□□□□□ -0.78
TRIM56-201ENST00000306085 RPL37AP8A6NKH3 93 aa10.15□□□□□ -0.78
TRIM56-201ENST00000306085 DEFB113Q30KQ7 82 aa10.15□□□□□ -0.78
TRIM56-201ENST00000306085 C6orf99Q4VX62 202 aa10.15□□□□□ -0.78
TRIM56-201ENST00000306085 LINC00308Q8TCZ7 52 aa10.15□□□□□ -0.78
TRIM56-201ENST00000306085 LY6LH3BQJ8 138 aa10.15□□□□□ -0.78
TRIM56-201ENST00000306085 DHRS4-AS1Q9P1J3 65 aa10.15□□□□□ -0.78
TRIM56-201ENST00000306085 ZFP36P26651 326 aaKnown RBP10.15□□□□□ -0.79
TRIM56-201ENST00000306085 JMJD1CQ15652 2540 aa10.15□□□□□ -0.79
TRIM56-201ENST00000306085 LY6G6EA0A0G2JKS1 128 aa10.14□□□□□ -0.79
TRIM56-201ENST00000306085 BEAN1Q3B7T3 259 aa10.14□□□□□ -0.79
TRIM56-201ENST00000306085 MRPS36P82909 103 aaKnown RBP10.14□□□□□ -0.79
TRIM56-201ENST00000306085 CDKN2A-AS1Q9UH64 79 aa10.14□□□□□ -0.79
TRIM56-201ENST00000306085 IGF1P05019 195 aa10.14□□□□□ -0.79
TRIM56-201ENST00000306085 GRNP28799 593 aaKnown RBP10.13□□□□□ -0.79
TRIM56-201ENST00000306085 C1orf147Q96MC9 270 aaPredicted RBP10.13□□□□□ -0.79
TRIM56-201ENST00000306085 CRYGAP11844 174 aa10.13□□□□□ -0.79
TRIM56-201ENST00000306085 IGF2-ASQ6U949 168 aa10.13□□□□□ -0.79
TRIM56-201ENST00000306085 IBA57-AS1B1ANH7 110 aa10.13□□□□□ -0.79
TRIM56-201ENST00000306085 IMUPQ9GZP8 106 aa10.13□□□□□ -0.79
TRIM56-201ENST00000306085 COL5A1P20908 1838 aaPredicted RBP10.13□□□□□ -0.79
TRIM56-201ENST00000306085 TP53TG3Q9ULZ0 132 aa10.13□□□□□ -0.79
TRIM56-201ENST00000306085 IGLV1-44P01699 117 aa10.13□□□□□ -0.79
TRIM56-201ENST00000306085 TP73-AS1Q9UF72 201 aa10.13□□□□□ -0.79
TRIM56-201ENST00000306085 A6NDX4 124 aa10.13□□□□□ -0.79
TRIM56-201ENST00000306085 FAM167A-AS1Q96KT0 104 aa10.13□□□□□ -0.79
TRIM56-201ENST00000306085 Q6ZTI0 123 aa10.12□□□□□ -0.79
TRIM56-201ENST00000306085 SPRNQ5BIV9 151 aa10.12□□□□□ -0.79
TRIM56-201ENST00000306085 DEFB131BA0A096LNP1 70 aa10.12□□□□□ -0.79
TRIM56-201ENST00000306085 C10orf25Q5T742 122 aa10.11□□□□□ -0.79
TRIM56-201ENST00000306085 Q6ZQY7 126 aa10.11□□□□□ -0.79
TRIM56-201ENST00000306085 PATE2Q6UY27 113 aa10.11□□□□□ -0.79
TRIM56-201ENST00000306085 FRMD6-AS1P0C7T7 363 aa10.11□□□□□ -0.79
TRIM56-201ENST00000306085 LOC100131303A0A0U1RQF7 123 aa10.11□□□□□ -0.79
TRIM56-201ENST00000306085 COL4A1P02462 1669 aa10.11□□□□□ -0.79
TRIM56-201ENST00000306085 CFAP126Q5VTH2 177 aa10.11□□□□□ -0.79
TRIM56-201ENST00000306085 CIRBP-AS1Q8TBR5 109 aa10.1□□□□□ -0.79
TRIM56-201ENST00000306085 LINC00208Q96KT6 92 aa10.1□□□□□ -0.79
TRIM56-201ENST00000306085 NRGNQ92686 78 aa10.1□□□□□ -0.79
TRIM56-201ENST00000306085 MAP6D1Q9H9H5 199 aa10.1□□□□□ -0.79
TRIM56-201ENST00000306085 COL4A6Q14031 1691 aa10.1□□□□□ -0.79
TRIM56-201ENST00000306085 M0R2N4 97 aa10.1□□□□□ -0.79
TRIM56-201ENST00000306085 TRBV30A0A0K0K1B3 111 aa10.1□□□□□ -0.79
TRIM56-201ENST00000306085 CPAMD8Q8IZJ3 1885 aa10.1□□□□□ -0.79
TRIM56-201ENST00000306085 ADAMTS20P59510 1910 aa10.1□□□□□ -0.79
TRIM56-201ENST00000306085 USP24Q9UPU5 2620 aa10.09□□□□□ -0.79
TRIM56-201ENST00000306085 H7C423 109 aa10.09□□□□□ -0.79
TRIM56-201ENST00000306085 HILS1P60008 231 aa10.09□□□□□ -0.79
TRIM56-201ENST00000306085 UNQ9165/PRO28630Q6UXU0 137 aa10.09□□□□□ -0.79
TRIM56-201ENST00000306085 LINC00526Q96FQ7 95 aa10.09□□□□□ -0.79
TRIM56-201ENST00000306085 IGLV2-18A0A075B6J9 118 aa10.09□□□□□ -0.79
TRIM56-201ENST00000306085 A0A0J9YX75 114 aa10.09□□□□□ -0.79
TRIM56-201ENST00000306085 Q8N976 141 aa10.09□□□□□ -0.79
TRIM56-201ENST00000306085 NEXN-AS1Q8NBZ9 246 aa10.09□□□□□ -0.79
TRIM56-201ENST00000306085 IGHV6-1A0A0B4J1U7 121 aa10.09□□□□□ -0.79
TRIM56-201ENST00000306085 A8MZ25 164 aa10.08□□□□□ -0.8
TRIM56-201ENST00000306085 COL4A5P29400 1685 aa10.08□□□□□ -0.8
TRIM56-201ENST00000306085 PLAC8L1A1L4L8 177 aa10.08□□□□□ -0.8
TRIM56-201ENST00000306085 FAM215AQ9Y5M1 114 aa10.08□□□□□ -0.8
TRIM56-201ENST00000306085 IGFL3Q6UXB1 125 aa10.07□□□□□ -0.8
TRIM56-201ENST00000306085 K7EMT4 169 aa10.07□□□□□ -0.8
TRIM56-201ENST00000306085 SYCNQ0VAF6 134 aa10.07□□□□□ -0.8
TRIM56-201ENST00000306085 MYCNOSP40205 109 aa10.07□□□□□ -0.8
TRIM56-201ENST00000306085 PCOTHQ58A44 107 aa10.07□□□□□ -0.8
TRIM56-201ENST00000306085 TRAV7A0A075B6U4 112 aa10.05□□□□□ -0.8
TRIM56-201ENST00000306085 IGLV4-3A0A075B6K6 122 aa10.05□□□□□ -0.8
TRIM56-201ENST00000306085 C17orf82Q86X59 251 aaPredicted RBP10.05□□□□□ -0.8
TRIM56-201ENST00000306085 SMIM11BQ8TCY0 68 aa10.05□□□□□ -0.8
TRIM56-201ENST00000306085 A0A1B0GXF2 115 aa10.04□□□□□ -0.8
TRIM56-201ENST00000306085 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
TRIM56-201ENST00000306085 M0R378 163 aa10.04□□□□□ -0.8
TRIM56-201ENST00000306085 INSL3P51460 131 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms