RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 LINC01561Q8N1V8 128 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 C19orf73Q9NVV2 129 aa3.85□□□□□ -1.79
VPS50-202ENST00000305866 IGHV3-11P01762 117 aa3.84□□□□□ -1.79
VPS50-202ENST00000305866 ZNF415Q09FC8 603 aa3.84□□□□□ -1.79
VPS50-202ENST00000305866 CSNK1G2-AS1Q8NCQ2 148 aa3.84□□□□□ -1.79
VPS50-202ENST00000305866 DNAH9Q9NYC9 4486 aa3.84□□□□□ -1.79
VPS50-202ENST00000305866 J3KRW8 73 aa3.84□□□□□ -1.79
VPS50-202ENST00000305866 KRTAP1-1Q07627 177 aa3.84□□□□□ -1.79
VPS50-202ENST00000305866 LY6EQ16553 131 aa3.84□□□□□ -1.79
VPS50-202ENST00000305866 DEFB113Q30KQ7 82 aa3.84□□□□□ -1.79
VPS50-202ENST00000305866 LYPD5Q6UWN5 251 aa3.84□□□□□ -1.79
VPS50-202ENST00000305866 C15orf53Q8NAA6 179 aa3.84□□□□□ -1.79
VPS50-202ENST00000305866 LINC00308Q8TCZ7 52 aa3.84□□□□□ -1.8
VPS50-202ENST00000305866 ANAPC13Q9BS18 74 aa3.84□□□□□ -1.8
VPS50-202ENST00000305866 IMUPQ9GZP8 106 aa3.84□□□□□ -1.8
VPS50-202ENST00000305866 NANOS2P60321 138 aaKnown RBP3.83□□□□□ -1.8
VPS50-202ENST00000305866 TMEM95Q3KNT9 176 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 TMEM170BQ5T4T1 132 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 FAM222AQ5U5X8 452 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 SCGB1D4Q6XE38 83 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 DUX3Q96PT4 197 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 CDKN2A-AS1Q9UH64 79 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 LY6G6DO95868 133 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 C1orf158Q8N1D5 194 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 UBE2WQ96B02 151 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 CHCHD5Q9BSY4 110 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 NDUFA7O95182 113 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 SCGB1C2P0DMR2 95 aa3.83□□□□□ -1.8
VPS50-202ENST00000305866 NF1P21359 2839 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 TEX15Q9BXT5 2789 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 GAGE12JA6NER3 117 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 GAGE7O76087 117 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 GAGE12FP0CL80 117 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 GAGE12GP0CL81 117 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 GAGE12IP0CL82 117 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 CD28P10747 220 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 SYNJ2BPP57105 145 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 GAGE4Q13068 117 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 TTC32Q5I0X7 151 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 C18orf65Q6ZTR6 163 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 DAZ4Q86SG3 579 aaKnown RBP3.82□□□□□ -1.8
VPS50-202ENST00000305866 DAZ3Q9NR90 486 aaKnown RBP3.82□□□□□ -1.8
VPS50-202ENST00000305866 CEP295Q9C0D2 2601 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 IGHV3-64A0A075B6Q5 118 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 SPINK13Q1W4C9 94 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 ODF3L2Q3SX64 289 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 COX7A2LO14548 114 aa3.82□□□□□ -1.8
VPS50-202ENST00000305866 LGALS3P17931 250 aaKnown RBP3.82□□□□□ -1.8
VPS50-202ENST00000305866 INSP01308 110 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 RNASE13Q5GAN3 156 aaKnown RBP3.81□□□□□ -1.8
VPS50-202ENST00000305866 LINC00337Q8N6G1 96 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 Q8NDZ9 215 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 YAE1D1Q9NRH1 226 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 NDUFA12Q9UI09 145 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 TRACP01848 142 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 RNASE1P07998 156 aaKnown RBP3.81□□□□□ -1.8
VPS50-202ENST00000305866 CXCL5P42830 114 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 RPL28P46779 137 aaKnown RBP3.81□□□□□ -1.8
VPS50-202ENST00000305866 ZNF843Q8N446 348 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 GVINP1Q7Z2Y8 2422 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 DAND5Q8N907 189 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.81□□□□□ -1.82e-6■■■■□ 23.8
VPS50-202ENST00000305866 DNAH10Q8IVF4 4471 aa3.81□□□□□ -1.8
VPS50-202ENST00000305866 IGSF10Q6WRI0 2623 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 ACACAQ13085 2346 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 DNAH7Q8WXX0 4024 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 LOC100131303A0A0U1RQF7 123 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 TRBV6-4A0A1B0GX49 114 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 CRYGAP11844 174 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 LINC00526Q96FQ7 95 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 SLURP1P55000 103 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 HERVK_113P63121 156 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 HERV-K104P63124 156 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 GAGE2BQ13066 116 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 ZNF56Q15929 161 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 GAGE2EQ4V326 116 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 CDC42SE2Q9NRR3 84 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 GAGE2DQ9UEU5 116 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.8□□□□□ -1.8
VPS50-202ENST00000305866 IGKV2-29A2NJV5 120 aaPredicted RBP3.8□□□□□ -1.8
VPS50-202ENST00000305866 IGLV1-51P01701 117 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 PF4P02776 101 aa3.8□□□□□ -1.8
VPS50-202ENST00000305866 NRGNQ92686 78 aa3.79□□□□□ -1.8
VPS50-202ENST00000305866 WNK2Q9Y3S1 2297 aa3.79□□□□□ -1.8
VPS50-202ENST00000305866 APCP25054 2843 aa3.79□□□□□ -1.8
VPS50-202ENST00000305866 A0A1W2PRX2 142 aa3.79□□□□□ -1.8
VPS50-202ENST00000305866 DEFB131AP59861 70 aa3.79□□□□□ -1.8
VPS50-202ENST00000305866 KIR2DL5BQ8NHK3 375 aa3.79□□□□□ -1.8
VPS50-202ENST00000305866 COPS9Q8WXC6 57 aa3.79□□□□□ -1.8
VPS50-202ENST00000305866 VWFP04275 2813 aa3.79□□□□□ -1.8
VPS50-202ENST00000305866 TENM4Q6N022 2769 aa3.78□□□□□ -1.8
VPS50-202ENST00000305866 A0A087WYN8 130 aa3.78□□□□□ -1.8
VPS50-202ENST00000305866 KNCNA6PVL3 124 aa3.78□□□□□ -1.8
VPS50-202ENST00000305866 WIPF1O43516 503 aa3.78□□□□□ -1.8
VPS50-202ENST00000305866 Q5XG85 94 aa3.78□□□□□ -1.8
VPS50-202ENST00000305866 K7EQD1 137 aa3.78□□□□□ -1.8
VPS50-202ENST00000305866 C16orf74Q96GX8 76 aa3.78□□□□□ -1.8
VPS50-202ENST00000305866 A0A1B0GX51 115 aa3.78□□□□□ -1.8
VPS50-202ENST00000305866 ACYP1P07311 99 aa3.78□□□□□ -1.8
VPS50-202ENST00000305866 C3orf22Q8N5N4 141 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms