RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 TRAV12-3A0A0B4J271 114 aa5.68□□□□□ -1.5
TM4SF1-201ENST00000305366 A0A1B0GWB2 263 aa5.68□□□□□ -1.5
TM4SF1-201ENST00000305366 ZNF688P0C7X2 276 aa5.68□□□□□ -1.5
TM4SF1-201ENST00000305366 ZFP2Q6ZN57 461 aa5.68□□□□□ -1.5
TM4SF1-201ENST00000305366 KIR2DL4Q99706 377 aa5.68□□□□□ -1.5
TM4SF1-201ENST00000305366 DYNC2H1Q8NCM8 4307 aaKnown RBP5.68□□□□□ -1.5
TM4SF1-201ENST00000305366 IGHV1OR15-1A0A075B7D0 117 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 RBMY1BA6NDE4 496 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 RBMY1EA6NEQ0 496 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 A8MTW9 85 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 CRYGDP07320 174 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 RBMY1DP0C7P1 496 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 RHOHQ15669 191 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 DEFB114Q30KQ6 69 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 FOXI2Q6ZQN5 318 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 NEGR1Q7Z3B1 354 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 DNAH7Q8WXX0 4024 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 TRAV2A0A0B4J234 112 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 SDHAF1A6NFY7 115 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 TSHBP01222 138 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 PMVKQ15126 192 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 C12orf74Q32Q52 190 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 AMTNQ6UX39 209 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 HIST1H4GQ99525 98 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 NAA38Q9BRA0 125 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 PRADC1Q9BSG0 188 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 JPT2Q9H910 190 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 NHP2Q9NX24 153 aaKnown RBP5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 TP53TG1Q9Y2A0 90 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 STARD9Q9P2P6 4700 aa5.67□□□□□ -1.5
TM4SF1-201ENST00000305366 SACSQ9NZJ4 4579 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 IGLV4-69A0A075B6H9 119 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 TRGV11A0A075B6L2 103 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 IGLL5B9A064 214 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 M0QY20 66 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 HERVK_113P61574 105 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 ZNF415Q09FC8 603 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 GAGE5Q13069 117 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 GAGE6Q13070 117 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 MORN3Q6PF18 240 aaPredicted RBP5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 TRPT1Q86TN4 253 aaKnown RBP5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 MDFICQ9P1T7 246 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 SS18L2Q9UHA2 77 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 MUC4Q99102 2169 aa5.66□□□□□ -1.5
TM4SF1-201ENST00000305366 C11orf86A6NJI1 115 aa5.65□□□□□ -1.5
TM4SF1-201ENST00000305366 F5H697 171 aa5.65□□□□□ -1.5
TM4SF1-201ENST00000305366 K7ERJ3 54 aa5.65□□□□□ -1.5
TM4SF1-201ENST00000305366 IL17DQ8TAD2 202 aa5.65□□□□□ -1.5
TM4SF1-201ENST00000305366 TRAV12-2A0A075B6T6 113 aa5.65□□□□□ -1.51
TM4SF1-201ENST00000305366 TINCRA0A1B0GVN0 87 aa5.65□□□□□ -1.51
TM4SF1-201ENST00000305366 ZNF815PA8K554 130 aa5.65□□□□□ -1.51
TM4SF1-201ENST00000305366 LY6G6CO95867 125 aa5.65□□□□□ -1.51
TM4SF1-201ENST00000305366 RPL13AP40429 203 aaKnown RBP5.65□□□□□ -1.51
TM4SF1-201ENST00000305366 SPINK13Q1W4C9 94 aa5.65□□□□□ -1.51
TM4SF1-201ENST00000305366 ZNF876PQ49A33 203 aa5.65□□□□□ -1.51
TM4SF1-201ENST00000305366 PIK3CD-AS1Q5SR53 167 aa5.65□□□□□ -1.51
TM4SF1-201ENST00000305366 LCE1DQ5T752 114 aa5.65□□□□□ -1.51
TM4SF1-201ENST00000305366 ZNF56Q15929 161 aa5.64□□□□□ -1.51
TM4SF1-201ENST00000305366 RRN3P1Q2M238 152 aa5.64□□□□□ -1.51
TM4SF1-201ENST00000305366 NFE4Q86UQ8 179 aa5.64□□□□□ -1.51
TM4SF1-201ENST00000305366 TMEM61Q8N0U2 210 aa5.64□□□□□ -1.51
TM4SF1-201ENST00000305366 SIGMAR1Q99720 223 aa5.64□□□□□ -1.51
TM4SF1-201ENST00000305366 IGKV3-20P01619 116 aa5.63□□□□□ -1.51
TM4SF1-201ENST00000305366 RPL39P62891 51 aaKnown RBP5.63□□□□□ -1.51
TM4SF1-201ENST00000305366 FAM74A4Q5TZK3 123 aa5.63□□□□□ -1.51
TM4SF1-201ENST00000305366 HYDINQ4G0P3 5121 aa5.63□□□□□ -1.51
TM4SF1-201ENST00000305366 F8W1H4 67 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 I3L3M4 83 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 UBE2D1P51668 147 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 C20orf203Q8NBC4 194 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 OVOL2Q9BRP0 275 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 LINC00467Q9BRT7 94 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 CSMD3Q7Z407 3707 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 A0A0J9YWU9 116 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 A0A0J9YY99 117 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 H3BMM0 161 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 P0DMU3 169 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 FAM231AP0DMU4 169 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 FAM231CP0DMU5 169 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 TNP2Q05952 138 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 SCGB1D4Q6XE38 83 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 OR13C6PQ8NH95 151 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 PLEKHB2Q96CS7 222 aa5.62□□□□□ -1.51
TM4SF1-201ENST00000305366 RBMY1A1P0DJD3 496 aaKnown RBP5.61□□□□□ -1.51
TM4SF1-201ENST00000305366 RBMY1CP0DJD4 496 aa5.61□□□□□ -1.51
TM4SF1-201ENST00000305366 RPL35AP18077 110 aaKnown RBP5.61□□□□□ -1.51
TM4SF1-201ENST00000305366 DEFB131AP59861 70 aa5.61□□□□□ -1.51
TM4SF1-201ENST00000305366 RBMY1FQ15415 496 aaKnown RBP5.61□□□□□ -1.51
TM4SF1-201ENST00000305366 ZNRF2Q8NHG8 242 aa5.61□□□□□ -1.51
TM4SF1-201ENST00000305366 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
TM4SF1-201ENST00000305366 PYGO1Q9Y3Y4 419 aa5.61□□□□□ -1.51
TM4SF1-201ENST00000305366 DNAH1Q9P2D7 4330 aa5.61□□□□□ -1.51
TM4SF1-201ENST00000305366 KNCNA6PVL3 124 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 A8MWV9 139 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 LEPROTO15243 131 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 SRSF9Q13242 221 aaKnown RBP eCLIP5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 DEFB135Q30KP9 77 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 TMEM170BQ5T4T1 132 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 SLC25A29Q8N8R3 303 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 AMELXQ99217 191 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms