RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 MRPS12O15235 138 aaKnown RBP11.45□□□□□ -0.58
FNDC1-201ENST00000297267 NDUFB1O75438 58 aa11.45□□□□□ -0.58
FNDC1-201ENST00000297267 CXCL5P42830 114 aa11.45□□□□□ -0.58
FNDC1-201ENST00000297267 C20orf197Q8N268 126 aa11.45□□□□□ -0.58
FNDC1-201ENST00000297267 COL5A1P20908 1838 aaPredicted RBP11.45□□□□□ -0.58
FNDC1-201ENST00000297267 SPANXB1Q9NS25 103 aaPredicted RBP11.45□□□□□ -0.58
FNDC1-201ENST00000297267 FAM30AQ9NZY2 134 aa11.45□□□□□ -0.58
FNDC1-201ENST00000297267 DSCAMO60469 2012 aa11.45□□□□□ -0.58
FNDC1-201ENST00000297267 ADAMTS20P59510 1910 aa11.45□□□□□ -0.58
FNDC1-201ENST00000297267 MP68P56378 58 aa11.44□□□□□ -0.58
FNDC1-201ENST00000297267 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
FNDC1-201ENST00000297267 LY6G6DO95868 133 aa11.44□□□□□ -0.58
FNDC1-201ENST00000297267 DAZAP2Q15038 168 aaPredicted RBP11.43□□□□□ -0.58
FNDC1-201ENST00000297267 C4orf48Q5BLP8 95 aa11.43□□□□□ -0.58
FNDC1-201ENST00000297267 C9orf116Q5BN46 136 aaPredicted RBP11.43□□□□□ -0.58
FNDC1-201ENST00000297267 M0QY20 66 aa11.43□□□□□ -0.58
FNDC1-201ENST00000297267 SPTAN1Q13813 2472 aaKnown RBP11.42□□□□□ -0.58
FNDC1-201ENST00000297267 IGLV9-49A0A0B4J1Y8 123 aa11.42□□□□□ -0.58
FNDC1-201ENST00000297267 RIF1Q5UIP0 2472 aaKnown RBP11.42□□□□□ -0.58
FNDC1-201ENST00000297267 ZFHX2Q9C0A1 2572 aaPredicted RBP11.42□□□□□ -0.58
FNDC1-201ENST00000297267 LY6LH3BQJ8 138 aa11.41□□□□□ -0.58
FNDC1-201ENST00000297267 LINC00308Q8TCZ7 52 aa11.41□□□□□ -0.58
FNDC1-201ENST00000297267 ZNF843Q8N446 348 aa11.41□□□□□ -0.58
FNDC1-201ENST00000297267 TECTAO75443 2155 aa11.41□□□□□ -0.58
FNDC1-201ENST00000297267 NANOS2P60321 138 aaKnown RBP11.41□□□□□ -0.58
FNDC1-201ENST00000297267 YPEL4Q96NS1 127 aa11.4□□□□□ -0.58
FNDC1-201ENST00000297267 K7EQG2 157 aa11.4□□□□□ -0.58
FNDC1-201ENST00000297267 PKIGQ9Y2B9 76 aa11.4□□□□□ -0.58
FNDC1-201ENST00000297267 B9D2Q9BPU9 175 aa11.4□□□□□ -0.58
FNDC1-201ENST00000297267 BPY2O14599 106 aa11.4□□□□□ -0.58
FNDC1-201ENST00000297267 RNASE3P12724 160 aaKnown RBP11.4□□□□□ -0.58
FNDC1-201ENST00000297267 ZNF580Q9UK33 172 aa11.4□□□□□ -0.59
FNDC1-201ENST00000297267 J3KT08 172 aa11.39□□□□□ -0.59
FNDC1-201ENST00000297267 MED14OSP0DP75 135 aa11.39□□□□□ -0.59
FNDC1-201ENST00000297267 CCDC179H3BU77 68 aa11.39□□□□□ -0.59
FNDC1-201ENST00000297267 TSHBP01222 138 aa11.39□□□□□ -0.59
FNDC1-201ENST00000297267 TNFRSF13BO14836 293 aaPredicted RBP11.39□□□□□ -0.59
FNDC1-201ENST00000297267 MUC22E2RYF6 1773 aaPredicted RBP11.39□□□□□ -0.59
FNDC1-201ENST00000297267 LRP4O75096 1905 aa11.39□□□□□ -0.59
FNDC1-201ENST00000297267 C6orf99Q4VX62 202 aa11.39□□□□□ -0.59
FNDC1-201ENST00000297267 C2orf91Q6ZV80 131 aa11.39□□□□□ -0.59
FNDC1-201ENST00000297267 WFDC13Q8IUB5 93 aa11.39□□□□□ -0.59
FNDC1-201ENST00000297267 ZNF702PQ9H963 129 aa11.38□□□□□ -0.59
FNDC1-201ENST00000297267 COX6A2Q02221 97 aa11.38□□□□□ -0.59
FNDC1-201ENST00000297267 NRACQ8N912 160 aa11.38□□□□□ -0.59
FNDC1-201ENST00000297267 TRBV6-8A0A0A6YYG3 113 aa11.38□□□□□ -0.59
FNDC1-201ENST00000297267 TRBV6-5A0A0K0K1A5 114 aa11.37□□□□□ -0.59
FNDC1-201ENST00000297267 OXLD1Q5BKU9 147 aa11.37□□□□□ -0.59
FNDC1-201ENST00000297267 AVPP01185 164 aa11.37□□□□□ -0.59
FNDC1-201ENST00000297267 KRTAP10-9P60411 292 aa11.36□□□□□ -0.59
FNDC1-201ENST00000297267 JMJD7-PLA2G4BH0Y9G9 81 aa11.36□□□□□ -0.59
FNDC1-201ENST00000297267 WNK1Q9H4A3 2382 aa11.36□□□□□ -0.59
FNDC1-201ENST00000297267 SMIM11BQ8TCY0 68 aa11.36□□□□□ -0.59
FNDC1-201ENST00000297267 C11orf71Q6IPW1 123 aa11.35□□□□□ -0.59
FNDC1-201ENST00000297267 KLK5Q9Y337 293 aaPredicted RBP11.35□□□□□ -0.59
FNDC1-201ENST00000297267 BRI3O95415 125 aa11.34□□□□□ -0.59
FNDC1-201ENST00000297267 SPANXCQ9NY87 97 aa11.33□□□□□ -0.6
FNDC1-201ENST00000297267 U3KQK5 164 aa11.33□□□□□ -0.6
FNDC1-201ENST00000297267 TET2Q6N021 2002 aaPredicted RBP11.33□□□□□ -0.6
FNDC1-201ENST00000297267 DEFB116Q30KQ4 102 aa11.32□□□□□ -0.6
FNDC1-201ENST00000297267 UBE2D4Q9Y2X8 147 aa11.32□□□□□ -0.6
FNDC1-201ENST00000297267 LY6G6CO95867 125 aa11.32□□□□□ -0.6
FNDC1-201ENST00000297267 H3BT86 120 aa11.32□□□□□ -0.6
FNDC1-201ENST00000297267 CCKP06307 115 aa11.31□□□□□ -0.6
FNDC1-201ENST00000297267 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.31□□□□□ -0.6
FNDC1-201ENST00000297267 CELA1Q9UNI1 258 aa11.31□□□□□ -0.6
FNDC1-201ENST00000297267 CASC2Q6XLA1 102 aa11.3□□□□□ -0.6
FNDC1-201ENST00000297267 C6orf223Q8N319 242 aa11.29□□□□□ -0.6
FNDC1-201ENST00000297267 UFSP1Q6NVU6 142 aa11.29□□□□□ -0.6
FNDC1-201ENST00000297267 NDUFC2O95298 119 aa11.29□□□□□ -0.6
FNDC1-201ENST00000297267 CACNA1HO95180 2353 aa11.29□□□□□ -0.6
FNDC1-201ENST00000297267 C3orf22Q8N5N4 141 aa11.28□□□□□ -0.6
FNDC1-201ENST00000297267 A8MTW9 85 aa11.28□□□□□ -0.6
FNDC1-201ENST00000297267 H7C423 109 aa11.28□□□□□ -0.6
FNDC1-201ENST00000297267 RBX1P62877 108 aa11.28□□□□□ -0.6
FNDC1-201ENST00000297267 KPRPQ5T749 579 aaPredicted RBP11.28□□□□□ -0.6
FNDC1-201ENST00000297267 LINC00643Q86TS7 51 aa11.28□□□□□ -0.6
FNDC1-201ENST00000297267 C9orf85Q96MD7 179 aa11.28□□□□□ -0.6
FNDC1-201ENST00000297267 LINC00959A0A1B0GUT2 108 aa11.27□□□□□ -0.61
FNDC1-201ENST00000297267 Q6ZQY7 126 aa11.27□□□□□ -0.61
FNDC1-201ENST00000297267 LINC00574Q9H8X3 128 aa11.27□□□□□ -0.61
FNDC1-201ENST00000297267 LINC00694P0DN24 101 aa11.27□□□□□ -0.61
FNDC1-201ENST00000297267 TSPEAR-AS2P59090 65 aa11.26□□□□□ -0.61
FNDC1-201ENST00000297267 Q6ZSN1 163 aa11.26□□□□□ -0.61
FNDC1-201ENST00000297267 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
FNDC1-201ENST00000297267 URB1-AS1Q96HZ7 61 aa11.26□□□□□ -0.61
FNDC1-201ENST00000297267 A0A087WYN8 130 aa11.26□□□□□ -0.61
FNDC1-201ENST00000297267 HILS1P60008 231 aa11.26□□□□□ -0.61
FNDC1-201ENST00000297267 IGLV4-69A0A075B6H9 119 aa11.26□□□□□ -0.61
FNDC1-201ENST00000297267 FAM236DA0A1B0GTK5 79 aa11.25□□□□□ -0.61
FNDC1-201ENST00000297267 FAM236CP0DP71 79 aa11.25□□□□□ -0.61
FNDC1-201ENST00000297267 UBE2D1P51668 147 aa11.25□□□□□ -0.61
FNDC1-201ENST00000297267 LINC00310P59036 64 aa11.25□□□□□ -0.61
FNDC1-201ENST00000297267 FBXL19-AS1Q494R0 122 aa11.25□□□□□ -0.61
FNDC1-201ENST00000297267 XGP55808 180 aa11.25□□□□□ -0.61
FNDC1-201ENST00000297267 A0A087WVE0 104 aa11.25□□□□□ -0.61
FNDC1-201ENST00000297267 SEC61GP60059 68 aa11.25□□□□□ -0.61
FNDC1-201ENST00000297267 TMEM89A2RUT3 159 aa11.24□□□□□ -0.61
FNDC1-201ENST00000297267 C5orf42Q9H799 3197 aa11.23□□□□□ -0.61
FNDC1-201ENST00000297267 USP17L23D6RBM5 183 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms