RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 C11orf72Q8NBR9 251 aa7.28□□□□□ -1.24
HMGCR-201ENST00000287936 PAX4O43316 350 aa7.27□□□□□ -1.25
HMGCR-201ENST00000287936 TRIAP1O43715 76 aa7.27□□□□□ -1.25
HMGCR-201ENST00000287936 RNASE1P07998 156 aaKnown RBP7.27□□□□□ -1.25
HMGCR-201ENST00000287936 Q6ZSN1 163 aa7.27□□□□□ -1.25
HMGCR-201ENST00000287936 COX7B2Q8TF08 81 aa7.27□□□□□ -1.25
HMGCR-201ENST00000287936 TRBV6-4A0A1B0GX49 114 aa7.27□□□□□ -1.25
HMGCR-201ENST00000287936 PKD1L2Q7Z442 2459 aa7.27□□□□□ -1.25
HMGCR-201ENST00000287936 NBEAQ8NFP9 2946 aa7.27□□□□□ -1.25
HMGCR-201ENST00000287936 C1orf158Q8N1D5 194 aa7.27□□□□□ -1.25
HMGCR-201ENST00000287936 PRO0461Q9UI25 63 aa7.27□□□□□ -1.25
HMGCR-201ENST00000287936 MUC4Q99102 2169 aa7.26□□□□□ -1.25
HMGCR-201ENST00000287936 MALP21145 153 aa7.26□□□□□ -1.25
HMGCR-201ENST00000287936 INSL3P51460 131 aa7.26□□□□□ -1.25
HMGCR-201ENST00000287936 LINC01006Q8NI28 216 aa7.26□□□□□ -1.25
HMGCR-201ENST00000287936 LINC00308Q8TCZ7 52 aa7.26□□□□□ -1.25
HMGCR-201ENST00000287936 A8MZ25 164 aa7.25□□□□□ -1.25
HMGCR-201ENST00000287936 CSDC2Q9Y534 153 aaKnown RBP7.25□□□□□ -1.25
HMGCR-201ENST00000287936 NOTCH3Q9UM47 2321 aa7.25□□□□□ -1.25
HMGCR-201ENST00000287936 INAFM2P0DMQ5 153 aa7.25□□□□□ -1.25
HMGCR-201ENST00000287936 RNF183Q96D59 192 aa7.25□□□□□ -1.25
HMGCR-201ENST00000287936 CLEC2BQ92478 149 aa7.25□□□□□ -1.25
HMGCR-201ENST00000287936 M0QXV9 152 aa7.25□□□□□ -1.25
HMGCR-201ENST00000287936 HIST2H2BDQ6DRA6 164 aa7.24□□□□□ -1.25
HMGCR-201ENST00000287936 ABCA2Q9BZC7 2435 aa7.24□□□□□ -1.25
HMGCR-201ENST00000287936 LINC00242Q5T6M2 205 aa7.24□□□□□ -1.25
HMGCR-201ENST00000287936 C11orf68Q9H3H3 251 aaKnown RBP7.24□□□□□ -1.25
HMGCR-201ENST00000287936 WDFY3Q8IZQ1 3526 aa7.24□□□□□ -1.25
HMGCR-201ENST00000287936 APOC4P55056 127 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 BBC3Q96PG8 261 aaPredicted RBP7.23□□□□□ -1.25
HMGCR-201ENST00000287936 USP9YO00507 2555 aaPredicted RBP7.23□□□□□ -1.25
HMGCR-201ENST00000287936 COX7A2LO14548 114 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 GYPEP15421 78 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 PFN2P35080 140 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 C15orf53Q8NAA6 179 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 ACYP1P07311 99 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 FAM110AQ9BQ89 295 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 C16orf95Q9H693 158 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 CDC42SE2Q9NRR3 84 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 C9orf66Q5T8R8 295 aa7.23□□□□□ -1.25
HMGCR-201ENST00000287936 NACAE9PAV3 2078 aa7.22□□□□□ -1.25
HMGCR-201ENST00000287936 DAD1P61803 113 aa7.22□□□□□ -1.25
HMGCR-201ENST00000287936 FHL3Q13643 280 aa7.22□□□□□ -1.25
HMGCR-201ENST00000287936 LST1O00453 97 aa7.22□□□□□ -1.25
HMGCR-201ENST00000287936 HTN3P15516 51 aa7.22□□□□□ -1.25
HMGCR-201ENST00000287936 ADAMTSL4-AS1Q5T5F5 129 aa7.22□□□□□ -1.25
HMGCR-201ENST00000287936 C5orf38Q86SI9 138 aa7.22□□□□□ -1.25
HMGCR-201ENST00000287936 CRLF1O75462 422 aa7.22□□□□□ -1.25
HMGCR-201ENST00000287936 MT-ATP8P03928 68 aa7.22□□□□□ -1.25
HMGCR-201ENST00000287936 IGLV1-51P01701 117 aa7.21□□□□□ -1.25
HMGCR-201ENST00000287936 BAALC-AS2P0C853 105 aa7.21□□□□□ -1.25
HMGCR-201ENST00000287936 TRBV6-8A0A0A6YYG3 113 aa7.21□□□□□ -1.26
HMGCR-201ENST00000287936 SMIM1B2RUZ4 78 aa7.21□□□□□ -1.26
HMGCR-201ENST00000287936 SMCPP49901 116 aaPredicted RBP7.21□□□□□ -1.26
HMGCR-201ENST00000287936 USP9XQ93008 2570 aaPredicted RBP7.21□□□□□ -1.26
HMGCR-201ENST00000287936 IGLV5-45A0A087WSX0 123 aa7.21□□□□□ -1.26
HMGCR-201ENST00000287936 H0YGX0 51 aa7.21□□□□□ -1.26
HMGCR-201ENST00000287936 MIR7-3HGQ8N6C7 128 aa7.21□□□□□ -1.26
HMGCR-201ENST00000287936 MYO18BQ8IUG5 2567 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 SMIM9A6NGZ8 99 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 HILS1P60008 231 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 NDUFA7O95182 113 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 XCL1P47992 114 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 COX6A2Q02221 97 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 SBSPONQ8IVN8 264 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 PRO0255Q9UI72 69 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 TEX49A0A1B0GTD5 131 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 LINC00694P0DN24 101 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 FAM222AQ5U5X8 452 aa7.2□□□□□ -1.26
HMGCR-201ENST00000287936 MRPL23Q16540 153 aaKnown RBP7.19□□□□□ -1.26
HMGCR-201ENST00000287936 WNK1Q9H4A3 2382 aa7.19□□□□□ -1.26
HMGCR-201ENST00000287936 IGLV5-39A0A0G2JS06 123 aa7.19□□□□□ -1.26
HMGCR-201ENST00000287936 TRACP01848 142 aa7.19□□□□□ -1.26
HMGCR-201ENST00000287936 HIST2H2BCQ6DN03 193 aa7.19□□□□□ -1.26
HMGCR-201ENST00000287936 WFDC10AQ9H1F0 79 aa7.19□□□□□ -1.26
HMGCR-201ENST00000287936 PRRC2AP48634 2157 aaKnown RBP7.19□□□□□ -1.26
HMGCR-201ENST00000287936 ANKRD17O75179 2603 aaKnown RBP7.19□□□□□ -1.26
HMGCR-201ENST00000287936 IBA57-AS1B1ANH7 110 aa7.18□□□□□ -1.26
HMGCR-201ENST00000287936 GAGE2AQ6NT46 116 aa7.18□□□□□ -1.26
HMGCR-201ENST00000287936 BOD1L1Q8NFC6 3051 aa7.18□□□□□ -1.26
HMGCR-201ENST00000287936 Q9UF83 564 aa7.18□□□□□ -1.26
HMGCR-201ENST00000287936 F5H768 121 aa7.18□□□□□ -1.26
HMGCR-201ENST00000287936 XGP55808 180 aa7.18□□□□□ -1.26
HMGCR-201ENST00000287936 S100A7L2Q5SY68 101 aa7.18□□□□□ -1.26
HMGCR-201ENST00000287936 LOC100131303A0A0U1RQF7 123 aa7.17□□□□□ -1.26
HMGCR-201ENST00000287936 ESM1Q9NQ30 184 aa7.17□□□□□ -1.26
HMGCR-201ENST00000287936 A0A096LPF7 62 aa7.17□□□□□ -1.26
HMGCR-201ENST00000287936 ANGP03950 147 aaKnown RBP7.17□□□□□ -1.26
HMGCR-201ENST00000287936 PTPN13Q12923 2485 aa7.17□□□□□ -1.26
HMGCR-201ENST00000287936 LYRM9A8MSI8 78 aa7.17□□□□□ -1.26
HMGCR-201ENST00000287936 CXCL5P42830 114 aa7.17□□□□□ -1.26
HMGCR-201ENST00000287936 LOC400499M0QZD8 3231 aa7.17□□□□□ -1.26
HMGCR-201ENST00000287936 CLPSL2Q6UWE3 100 aa7.17□□□□□ -1.26
HMGCR-201ENST00000287936 MYO9AB2RTY4 2548 aa7.16□□□□□ -1.26
HMGCR-201ENST00000287936 LITAFQ99732 161 aa7.16□□□□□ -1.26
HMGCR-201ENST00000287936 ATP5G1P05496 136 aa7.16□□□□□ -1.26
HMGCR-201ENST00000287936 CDIP1Q9H305 208 aa7.15□□□□□ -1.26
HMGCR-201ENST00000287936 ZNF462Q96JM2 2506 aa7.15□□□□□ -1.26
HMGCR-201ENST00000287936 KIR2DL5BQ8NHK3 375 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms