RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 MRPL52Q86TS9 123 aaKnown RBP12.4□□□□□ -0.42
MSGN1-201ENST00000281047 VCYO14598 125 aa12.39□□□□□ -0.43
MSGN1-201ENST00000281047 FCER1GP30273 86 aa12.39□□□□□ -0.43
MSGN1-201ENST00000281047 SMDT1Q9H4I9 107 aa12.39□□□□□ -0.43
MSGN1-201ENST00000281047 GVQW2A0A096LPI5 108 aaPredicted RBP12.38□□□□□ -0.43
MSGN1-201ENST00000281047 LINC00959A0A1B0GUT2 108 aa12.38□□□□□ -0.43
MSGN1-201ENST00000281047 OXTP01178 125 aa12.38□□□□□ -0.43
MSGN1-201ENST00000281047 XCL1P47992 114 aa12.38□□□□□ -0.43
MSGN1-201ENST00000281047 FOXI1Q12951 378 aa12.38□□□□□ -0.43
MSGN1-201ENST00000281047 C9JQL5 133 aa12.37□□□□□ -0.43
MSGN1-201ENST00000281047 SMKR1H3BMG3 65 aa12.37□□□□□ -0.43
MSGN1-201ENST00000281047 CCL25O15444 150 aa12.37□□□□□ -0.43
MSGN1-201ENST00000281047 SUMO2P61956 95 aaKnown RBP12.37□□□□□ -0.43
MSGN1-201ENST00000281047 SMAGPQ0VAQ4 97 aa12.37□□□□□ -0.43
MSGN1-201ENST00000281047 SS18Q15532 418 aa12.37□□□□□ -0.43
MSGN1-201ENST00000281047 SPACA4Q8TDM5 124 aa12.37□□□□□ -0.43
MSGN1-201ENST00000281047 KIR2DL4Q99706 377 aa12.37□□□□□ -0.43
MSGN1-201ENST00000281047 A0A1B0GW15 77 aa12.36□□□□□ -0.43
MSGN1-201ENST00000281047 SMIM27A0A1W2PRY6 76 aa12.36□□□□□ -0.43
MSGN1-201ENST00000281047 PPP1R2P9O14990 202 aa12.36□□□□□ -0.43
MSGN1-201ENST00000281047 CHTF8P0CG12 524 aa12.36□□□□□ -0.43
MSGN1-201ENST00000281047 ZNF664Q8N3J9 261 aa12.36□□□□□ -0.43
MSGN1-201ENST00000281047 CDC42SE2Q9NRR3 84 aa12.36□□□□□ -0.43
MSGN1-201ENST00000281047 A0A087WYN8 130 aa12.35□□□□□ -0.43
MSGN1-201ENST00000281047 SRSF3P84103 164 aaKnown RBP12.35□□□□□ -0.43
MSGN1-201ENST00000281047 FAM104BQ5XKR9 115 aa12.35□□□□□ -0.43
MSGN1-201ENST00000281047 NRACQ8N912 160 aa12.35□□□□□ -0.43
MSGN1-201ENST00000281047 IGHV1-58A0A0C4DH39 117 aa12.34□□□□□ -0.43
MSGN1-201ENST00000281047 COX6A2Q02221 97 aa12.34□□□□□ -0.43
MSGN1-201ENST00000281047 LINC00862A6NCI5 91 aa12.33□□□□□ -0.44
MSGN1-201ENST00000281047 CAMPP49913 170 aa12.33□□□□□ -0.44
MSGN1-201ENST00000281047 MRPL51Q4U2R6 128 aaKnown RBP12.33□□□□□ -0.44
MSGN1-201ENST00000281047 CD164L2Q6UWJ8 174 aa12.33□□□□□ -0.44
MSGN1-201ENST00000281047 PKIGQ9Y2B9 76 aa12.33□□□□□ -0.44
MSGN1-201ENST00000281047 CSDC2Q9Y534 153 aaKnown RBP12.33□□□□□ -0.44
MSGN1-201ENST00000281047 S100A8P05109 93 aa12.32□□□□□ -0.44
MSGN1-201ENST00000281047 TMEM18Q96B42 140 aa12.32□□□□□ -0.44
MSGN1-201ENST00000281047 PLAC8Q9NZF1 115 aa12.32□□□□□ -0.44
MSGN1-201ENST00000281047 CKS2P33552 79 aa12.31□□□□□ -0.44
MSGN1-201ENST00000281047 PRSS3P2Q8NHM4 247 aa12.31□□□□□ -0.44
MSGN1-201ENST00000281047 C20orf78Q9BR46 151 aa12.31□□□□□ -0.44
MSGN1-201ENST00000281047 IGKV2-24A0A0C4DH68 120 aa12.3□□□□□ -0.44
MSGN1-201ENST00000281047 C1orf196B1AJZ1 125 aa12.3□□□□□ -0.44
MSGN1-201ENST00000281047 TCAPO15273 167 aa12.3□□□□□ -0.44
MSGN1-201ENST00000281047 HNRNPA3P51991 378 aaKnown RBP12.3□□□□□ -0.44
MSGN1-201ENST00000281047 MAJINQ3KP22 176 aa12.3□□□□□ -0.44
MSGN1-201ENST00000281047 C7orf33Q8WU49 177 aa12.3□□□□□ -0.44
MSGN1-201ENST00000281047 UBE2D4Q9Y2X8 147 aa12.3□□□□□ -0.44
MSGN1-201ENST00000281047 TRBV24-1A0A075B6N3 115 aa12.29□□□□□ -0.44
MSGN1-201ENST00000281047 F8W036 122 aa12.29□□□□□ -0.44
MSGN1-201ENST00000281047 ZNF561-AS1K7EIQ3 104 aa12.29□□□□□ -0.44
MSGN1-201ENST00000281047 RPL32P62910 135 aaKnown RBP12.29□□□□□ -0.44
MSGN1-201ENST00000281047 HBBP68871 147 aa12.29□□□□□ -0.44
MSGN1-201ENST00000281047 MRPL54Q6P161 138 aaKnown RBP12.28□□□□□ -0.44
MSGN1-201ENST00000281047 CARD19Q96LW7 228 aa12.28□□□□□ -0.44
MSGN1-201ENST00000281047 TIMM21Q9BVV7 248 aa12.28□□□□□ -0.44
MSGN1-201ENST00000281047 LINC00474Q9P2X8 69 aa12.28□□□□□ -0.44
MSGN1-201ENST00000281047 MALP21145 153 aa12.27□□□□□ -0.45
MSGN1-201ENST00000281047 COX7A2LO14548 114 aa12.26□□□□□ -0.45
MSGN1-201ENST00000281047 TNFRSF6BO95407 300 aa12.26□□□□□ -0.45
MSGN1-201ENST00000281047 SERTAD4-AS1Q5TG53 156 aa12.26□□□□□ -0.45
MSGN1-201ENST00000281047 STPG4Q8N801 248 aa12.26□□□□□ -0.45
MSGN1-201ENST00000281047 LINC00526Q96FQ7 95 aa12.26□□□□□ -0.45
MSGN1-201ENST00000281047 A0A096LNI7 61 aa12.25□□□□□ -0.45
MSGN1-201ENST00000281047 TRAV13-1A0A0B4J241 112 aa12.25□□□□□ -0.45
MSGN1-201ENST00000281047 A0A1B0GXF2 115 aa12.25□□□□□ -0.45
MSGN1-201ENST00000281047 D6R8Y8 96 aa12.25□□□□□ -0.45
MSGN1-201ENST00000281047 PPBPP02775 128 aa12.25□□□□□ -0.45
MSGN1-201ENST00000281047 SYCNQ0VAF6 134 aa12.25□□□□□ -0.45
MSGN1-201ENST00000281047 RNASE13Q5GAN3 156 aaKnown RBP12.25□□□□□ -0.45
MSGN1-201ENST00000281047 Q6ZRU5 148 aa12.25□□□□□ -0.45
MSGN1-201ENST00000281047 SMIM2Q9BVW6 85 aa12.25□□□□□ -0.45
MSGN1-201ENST00000281047 PHOX2AO14813 284 aa12.24□□□□□ -0.45
MSGN1-201ENST00000281047 Q6ZUT4 128 aa12.24□□□□□ -0.45
MSGN1-201ENST00000281047 ATP5L2Q7Z4Y8 100 aa12.23□□□□□ -0.45
MSGN1-201ENST00000281047 SPANXA1Q9NS26 97 aa12.22□□□□□ -0.45
MSGN1-201ENST00000281047 LRP1Q07954 4544 aaKnown RBP12.21□□□□□ -0.45
MSGN1-201ENST00000281047 IGLV4-69A0A075B6H9 119 aa12.21□□□□□ -0.45
MSGN1-201ENST00000281047 APOMO95445 188 aa12.21□□□□□ -0.45
MSGN1-201ENST00000281047 NPYP01303 97 aa12.21□□□□□ -0.45
MSGN1-201ENST00000281047 RPL39P62891 51 aaKnown RBP12.21□□□□□ -0.45
MSGN1-201ENST00000281047 RAB14P61106 215 aa12.2□□□□□ -0.46
MSGN1-201ENST00000281047 ORMDL3Q8N138 153 aa12.2□□□□□ -0.46
MSGN1-201ENST00000281047 PNRC1Q12796 327 aaPredicted RBP12.19□□□□□ -0.46
MSGN1-201ENST00000281047 C5orf38Q86SI9 138 aa12.19□□□□□ -0.46
MSGN1-201ENST00000281047 CAMK2N2Q96S95 79 aa12.19□□□□□ -0.46
MSGN1-201ENST00000281047 LOC107984640A0A0U1RRK4 108 aa12.18□□□□□ -0.46
MSGN1-201ENST00000281047 RAB5AP20339 215 aa12.18□□□□□ -0.46
MSGN1-201ENST00000281047 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
MSGN1-201ENST00000281047 TMEM136Q6ZRR5 245 aa12.18□□□□□ -0.46
MSGN1-201ENST00000281047 C2orf48Q96LS8 159 aa12.18□□□□□ -0.46
MSGN1-201ENST00000281047 PRR3P79522 188 aaKnown RBP12.17□□□□□ -0.46
MSGN1-201ENST00000281047 PRELID3AQ96N28 172 aa12.17□□□□□ -0.46
MSGN1-201ENST00000281047 PKHD1L1Q86WI1 4243 aa12.16□□□□□ -0.46
MSGN1-201ENST00000281047 MT-ND4LP03901 98 aa12.16□□□□□ -0.46
MSGN1-201ENST00000281047 PTTG1IPP53801 180 aa12.16□□□□□ -0.46
MSGN1-201ENST00000281047 ANAPC16Q96DE5 110 aa12.16□□□□□ -0.46
MSGN1-201ENST00000281047 SPAG11BQ08648 103 aa12.15□□□□□ -0.46
MSGN1-201ENST00000281047 GAGE2BQ13066 116 aa12.15□□□□□ -0.46
MSGN1-201ENST00000281047 OR10D4PQ8NGN7 298 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms