RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 MYMXA0A1B0GTQ4 84 aa14.78□□□□□ -0.04
YBX3-202ENST00000279550 TRBV6-4A0A1B0GX49 114 aa14.78□□□□□ -0.04
YBX3-202ENST00000279550 TAX1BP3O14907 124 aa14.78□□□□□ -0.04
YBX3-202ENST00000279550 ORAOV1Q8WV07 137 aa14.78□□□□□ -0.04
YBX3-202ENST00000279550 CIDEAO60543 219 aa14.78□□□□□ -0.04
YBX3-202ENST00000279550 ZNF22P17026 224 aaPredicted RBP14.78□□□□□ -0.04
YBX3-202ENST00000279550 TSPEAR-AS2P59090 65 aa14.78□□□□□ -0.04
YBX3-202ENST00000279550 DAZ4Q86SG3 579 aaKnown RBP14.78□□□□□ -0.04
YBX3-202ENST00000279550 DAZ3Q9NR90 486 aaKnown RBP14.78□□□□□ -0.04
YBX3-202ENST00000279550 NPSP0C0P6 89 aa14.77□□□□□ -0.05
YBX3-202ENST00000279550 HERVK_113P61574 105 aa14.77□□□□□ -0.05
YBX3-202ENST00000279550 LINC00694P0DN24 101 aa14.76□□□□□ -0.05
YBX3-202ENST00000279550 CRYBA4P53673 196 aa14.76□□□□□ -0.05
YBX3-202ENST00000279550 SBSPONQ8IVN8 264 aa14.76□□□□□ -0.05
YBX3-202ENST00000279550 SEC11AP67812 179 aa14.75□□□□□ -0.05
YBX3-202ENST00000279550 COX11Q9Y6N1 276 aa14.75□□□□□ -0.05
YBX3-202ENST00000279550 NBEAL2Q6ZNJ1 2754 aa14.75□□□□□ -0.05
YBX3-202ENST00000279550 TMEM223A0PJW6 202 aa14.75□□□□□ -0.05
YBX3-202ENST00000279550 MIFP14174 115 aa14.75□□□□□ -0.05
YBX3-202ENST00000279550 TIMM21Q9BVV7 248 aa14.75□□□□□ -0.05
YBX3-202ENST00000279550 ZNF815PA8K554 130 aa14.74□□□□□ -0.05
YBX3-202ENST00000279550 K7EP13 123 aa14.74□□□□□ -0.05
YBX3-202ENST00000279550 DEFB4AO15263 64 aa14.74□□□□□ -0.05
YBX3-202ENST00000279550 DEFB121Q5J5C9 76 aa14.74□□□□□ -0.05
YBX3-202ENST00000279550 Q8NAQ8 132 aa14.74□□□□□ -0.05
YBX3-202ENST00000279550 PLEKHB2Q96CS7 222 aa14.74□□□□□ -0.05
YBX3-202ENST00000279550 IGHV4-28A0A0C4DH34 117 aa14.73□□□□□ -0.05
YBX3-202ENST00000279550 FXYD2P54710 66 aa14.72□□□□□ -0.05
YBX3-202ENST00000279550 MRPS36P82909 103 aaKnown RBP14.72□□□□□ -0.05
YBX3-202ENST00000279550 FAM222AQ5U5X8 452 aa14.72□□□□□ -0.05
YBX3-202ENST00000279550 RETNQ9HD89 108 aa14.72□□□□□ -0.05
YBX3-202ENST00000279550 GCSHP23434 173 aa14.72□□□□□ -0.05
YBX3-202ENST00000279550 GTSF1LQ9H1H1 148 aa14.7□□□□□ -0.06
YBX3-202ENST00000279550 IGHV3-64A0A075B6Q5 118 aa14.69□□□□□ -0.06
YBX3-202ENST00000279550 LEPROTO15243 131 aa14.69□□□□□ -0.06
YBX3-202ENST00000279550 J3QQQ9 107 aa14.69□□□□□ -0.06
YBX3-202ENST00000279550 UBE2D1P51668 147 aa14.69□□□□□ -0.06
YBX3-202ENST00000279550 DGAT2L7PQ6IED9 249 aa14.69□□□□□ -0.06
YBX3-202ENST00000279550 CEND1Q8N111 149 aa14.69□□□□□ -0.06
YBX3-202ENST00000279550 TMEM243Q9BU79 118 aa14.69□□□□□ -0.06
YBX3-202ENST00000279550 TINCRA0A1B0GVN0 87 aa14.68□□□□□ -0.06
YBX3-202ENST00000279550 LYRM9A8MSI8 78 aa14.68□□□□□ -0.06
YBX3-202ENST00000279550 A6NDN8 102 aa14.67□□□□□ -0.06
YBX3-202ENST00000279550 MRAPQ8TCY5 172 aa14.67□□□□□ -0.06
YBX3-202ENST00000279550 TM2D2Q9BX73 214 aa14.67□□□□□ -0.06
YBX3-202ENST00000279550 TAL2Q16559 108 aa14.66□□□□□ -0.06
YBX3-202ENST00000279550 LINC00469Q8N7U9 141 aa14.66□□□□□ -0.06
YBX3-202ENST00000279550 HIST1H4GQ99525 98 aa14.66□□□□□ -0.06
YBX3-202ENST00000279550 CELA1Q9UNI1 258 aa14.66□□□□□ -0.06
YBX3-202ENST00000279550 LGALS3P17931 250 aaKnown RBP14.65□□□□□ -0.06
YBX3-202ENST00000279550 TM2D3Q9BRN9 247 aa14.65□□□□□ -0.06
YBX3-202ENST00000279550 CSDC2Q9Y534 153 aaKnown RBP14.65□□□□□ -0.06
YBX3-202ENST00000279550 H3BRM9 83 aa14.64□□□□□ -0.07
YBX3-202ENST00000279550 GYPEP15421 78 aa14.64□□□□□ -0.07
YBX3-202ENST00000279550 SCGB1D4Q6XE38 83 aa14.64□□□□□ -0.07
YBX3-202ENST00000279550 SPATA25Q9BR10 227 aa14.64□□□□□ -0.07
YBX3-202ENST00000279550 TRAV8-3A0A0A6YYJ7 113 aa14.63□□□□□ -0.07
YBX3-202ENST00000279550 A0A0J9YY99 117 aa14.63□□□□□ -0.07
YBX3-202ENST00000279550 COX6A2Q02221 97 aa14.63□□□□□ -0.07
YBX3-202ENST00000279550 OR5A1Q8NGJ0 315 aa14.63□□□□□ -0.07
YBX3-202ENST00000279550 CDC42SE2Q9NRR3 84 aa14.63□□□□□ -0.07
YBX3-202ENST00000279550 TRBV6-8A0A0A6YYG3 113 aa14.62□□□□□ -0.07
YBX3-202ENST00000279550 K7ERJ3 54 aa14.62□□□□□ -0.07
YBX3-202ENST00000279550 UBE2L6O14933 153 aa14.62□□□□□ -0.07
YBX3-202ENST00000279550 SPINK8P0C7L1 97 aa14.62□□□□□ -0.07
YBX3-202ENST00000279550 PTTG1IPP53801 180 aa14.62□□□□□ -0.07
YBX3-202ENST00000279550 GAGE6Q13070 117 aa14.62□□□□□ -0.07
YBX3-202ENST00000279550 SPART-AS1P0CW21 52 aa14.61□□□□□ -0.07
YBX3-202ENST00000279550 IGHV3-30-3P0DP02 117 aa14.61□□□□□ -0.07
YBX3-202ENST00000279550 AMMECR1LQ6DCA0 310 aa14.61□□□□□ -0.07
YBX3-202ENST00000279550 RAB37Q96AX2 223 aa14.61□□□□□ -0.07
YBX3-202ENST00000279550 GEMIN7Q9H840 131 aaKnown RBP14.61□□□□□ -0.07
YBX3-202ENST00000279550 PRO0255Q9UI72 69 aa14.61□□□□□ -0.07
YBX3-202ENST00000279550 TIRAPP58753 221 aa14.61□□□□□ -0.07
YBX3-202ENST00000279550 LINC00242Q5T6M2 205 aa14.61□□□□□ -0.07
YBX3-202ENST00000279550 NAA38Q9BRA0 125 aaKnown RBP14.61□□□□□ -0.07
YBX3-202ENST00000279550 C11orf68Q9H3H3 251 aaKnown RBP14.61□□□□□ -0.07
YBX3-202ENST00000279550 CDKN2A-AS1Q9UH64 79 aa14.61□□□□□ -0.07
YBX3-202ENST00000279550 IGLV5-45A0A087WSX0 123 aa14.6□□□□□ -0.07
YBX3-202ENST00000279550 DAD1P61803 113 aa14.6□□□□□ -0.07
YBX3-202ENST00000279550 NHP2Q9NX24 153 aaKnown RBP14.6□□□□□ -0.07
YBX3-202ENST00000279550 C9orf118A6NHY6 69 aa14.59□□□□□ -0.07
YBX3-202ENST00000279550 SMIM13P0DJ93 91 aa14.59□□□□□ -0.07
YBX3-202ENST00000279550 ATP6V0E2Q8NHE4 81 aa14.59□□□□□ -0.07
YBX3-202ENST00000279550 TRAV13-1A0A0B4J241 112 aa14.58□□□□□ -0.07
YBX3-202ENST00000279550 IGHV1-58A0A0C4DH39 117 aa14.58□□□□□ -0.07
YBX3-202ENST00000279550 H7C423 109 aa14.58□□□□□ -0.07
YBX3-202ENST00000279550 SMAGPQ0VAQ4 97 aa14.58□□□□□ -0.07
YBX3-202ENST00000279550 VAMP3Q15836 100 aa14.58□□□□□ -0.07
YBX3-202ENST00000279550 FAM19A3Q7Z5A8 133 aa14.58□□□□□ -0.07
YBX3-202ENST00000279550 VSIG2Q96IQ7 327 aa14.58□□□□□ -0.07
YBX3-202ENST00000279550 TEX48A0A1B0GUV7 120 aa14.58□□□□□ -0.08
YBX3-202ENST00000279550 PAX4O43316 350 aa14.58□□□□□ -0.08
YBX3-202ENST00000279550 C10orf126Q8N4M7 172 aa14.58□□□□□ -0.08
YBX3-202ENST00000279550 TMEM101Q96IK0 257 aa14.58□□□□□ -0.08
YBX3-202ENST00000279550 CHCHD5Q9BSY4 110 aa14.57□□□□□ -0.08
YBX3-202ENST00000279550 IGLV4-60A0A075B6I1 120 aa14.56□□□□□ -0.08
YBX3-202ENST00000279550 A0A096LPF7 62 aa14.56□□□□□ -0.08
YBX3-202ENST00000279550 CCL25O15444 150 aa14.56□□□□□ -0.08
YBX3-202ENST00000279550 B9D2Q9BPU9 175 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms