RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 UBE2L6O14933 153 aa13.61□□□□□ -0.23
C11orf49-201ENST00000278460 TCTAP57738 103 aa13.61□□□□□ -0.23
C11orf49-201ENST00000278460 IGKV2D-26A0A0A0MRZ7 120 aa13.6□□□□□ -0.23
C11orf49-201ENST00000278460 DLEU1O43261 78 aa13.6□□□□□ -0.23
C11orf49-201ENST00000278460 NMUP48645 174 aa13.6□□□□□ -0.23
C11orf49-201ENST00000278460 BOD1L2Q8IYS8 172 aa13.6□□□□□ -0.23
C11orf49-201ENST00000278460 SPATA25Q9BR10 227 aa13.6□□□□□ -0.23
C11orf49-201ENST00000278460 C2orf88Q9BSF0 95 aa13.6□□□□□ -0.23
C11orf49-201ENST00000278460 MRPS16Q9Y3D3 137 aaKnown RBP13.6□□□□□ -0.23
C11orf49-201ENST00000278460 TM2D3Q9BRN9 247 aa13.59□□□□□ -0.23
C11orf49-201ENST00000278460 CHAC1Q9BUX1 264 aa13.59□□□□□ -0.23
C11orf49-201ENST00000278460 MGAM2Q2M2H8 2515 aa13.59□□□□□ -0.23
C11orf49-201ENST00000278460 TRAV26-1A0A087WT03 109 aa13.58□□□□□ -0.24
C11orf49-201ENST00000278460 A0A0J9YY99 117 aa13.58□□□□□ -0.24
C11orf49-201ENST00000278460 HTN3P15516 51 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 ZNF25P17030 456 aaPredicted RBP13.57□□□□□ -0.24
C11orf49-201ENST00000278460 CTAG1AP78358 180 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 RNASE13Q5GAN3 156 aaKnown RBP13.57□□□□□ -0.24
C11orf49-201ENST00000278460 DEFB121Q5J5C9 76 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 TP73-AS1Q9UF72 201 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 A0A0J9YWU9 116 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 A0A0J9YXV3 536 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 E9PLD3 99 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 AMMECR1LQ6DCA0 310 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 LURAP1LQ8IV03 231 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 PCP2Q8IVA1 136 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 OR5A1Q8NGJ0 315 aa13.57□□□□□ -0.24
C11orf49-201ENST00000278460 HERVK_113P61574 105 aa13.56□□□□□ -0.24
C11orf49-201ENST00000278460 TMEM101Q96IK0 257 aa13.56□□□□□ -0.24
C11orf49-201ENST00000278460 CDC42SE2Q9NRR3 84 aa13.56□□□□□ -0.24
C11orf49-201ENST00000278460 MRPL23Q16540 153 aaKnown RBP13.55□□□□□ -0.24
C11orf49-201ENST00000278460 TMEM170BQ5T4T1 132 aa13.55□□□□□ -0.24
C11orf49-201ENST00000278460 SH2D6Q7Z4S9 175 aa13.55□□□□□ -0.24
C11orf49-201ENST00000278460 TINCRA0A1B0GVN0 87 aa13.54□□□□□ -0.24
C11orf49-201ENST00000278460 UBE2D1P51668 147 aa13.54□□□□□ -0.24
C11orf49-201ENST00000278460 GAGE6Q13070 117 aa13.54□□□□□ -0.24
C11orf49-201ENST00000278460 CHCHD5Q9BSY4 110 aa13.54□□□□□ -0.24
C11orf49-201ENST00000278460 ICOSQ9Y6W8 199 aa13.54□□□□□ -0.24
C11orf49-201ENST00000278460 TENM3Q9P273 2699 aa13.54□□□□□ -0.24
C11orf49-201ENST00000278460 SIVA1O15304 175 aa13.53□□□□□ -0.24
C11orf49-201ENST00000278460 ZNF22P17026 224 aaPredicted RBP13.53□□□□□ -0.24
C11orf49-201ENST00000278460 C2orf91Q6ZV80 131 aa13.53□□□□□ -0.24
C11orf49-201ENST00000278460 A0A096LPF7 62 aa13.53□□□□□ -0.24
C11orf49-201ENST00000278460 H3BNG1 76 aa13.53□□□□□ -0.24
C11orf49-201ENST00000278460 M0R143 59 aa13.53□□□□□ -0.24
C11orf49-201ENST00000278460 Q6ZTC4 211 aa13.52□□□□□ -0.25
C11orf49-201ENST00000278460 FAM19A3Q7Z5A8 133 aa13.52□□□□□ -0.25
C11orf49-201ENST00000278460 MRAPQ8TCY5 172 aa13.52□□□□□ -0.25
C11orf49-201ENST00000278460 SNHG12Q9BXW3 62 aa13.52□□□□□ -0.25
C11orf49-201ENST00000278460 TMEM223A0PJW6 202 aa13.51□□□□□ -0.25
C11orf49-201ENST00000278460 C11orf45Q8TAV5 145 aa13.51□□□□□ -0.25
C11orf49-201ENST00000278460 TRAV8-6A0A0B4J262 113 aa13.5□□□□□ -0.25
C11orf49-201ENST00000278460 TIRAPP58753 221 aa13.5□□□□□ -0.25
C11orf49-201ENST00000278460 TTTY13Q9BZ97 58 aa13.5□□□□□ -0.25
C11orf49-201ENST00000278460 HUWE1Q7Z6Z7 4374 aaKnown RBP13.5□□□□□ -0.25
C11orf49-201ENST00000278460 EREGO14944 169 aa13.5□□□□□ -0.25
C11orf49-201ENST00000278460 SEC11AP67812 179 aa13.49□□□□□ -0.25
C11orf49-201ENST00000278460 MAPKAPK5-AS1Q8N8E1 139 aa13.49□□□□□ -0.25
C11orf49-201ENST00000278460 GEMIN7Q9H840 131 aaKnown RBP13.49□□□□□ -0.25
C11orf49-201ENST00000278460 A0A1B0GUV1 79 aa13.48□□□□□ -0.25
C11orf49-201ENST00000278460 LBHQ53QV2 105 aaPredicted RBP13.48□□□□□ -0.25
C11orf49-201ENST00000278460 HIGD1BQ9P298 99 aa13.48□□□□□ -0.25
C11orf49-201ENST00000278460 IGLV4-60A0A075B6I1 120 aa13.47□□□□□ -0.25
C11orf49-201ENST00000278460 IGLV5-45A0A087WSX0 123 aa13.47□□□□□ -0.25
C11orf49-201ENST00000278460 NANOS2P60321 138 aaKnown RBP13.47□□□□□ -0.25
C11orf49-201ENST00000278460 MYMXA0A1B0GTQ4 84 aa13.46□□□□□ -0.25
C11orf49-201ENST00000278460 LEPROTO15243 131 aa13.46□□□□□ -0.25
C11orf49-201ENST00000278460 HERVK_113P63121 156 aa13.46□□□□□ -0.25
C11orf49-201ENST00000278460 LINC00242Q5T6M2 205 aa13.46□□□□□ -0.25
C11orf49-201ENST00000278460 LELP1Q5T871 98 aa13.46□□□□□ -0.26
C11orf49-201ENST00000278460 LINC00469Q8N7U9 141 aa13.45□□□□□ -0.26
C11orf49-201ENST00000278460 DEFB131BA0A096LNP1 70 aa13.44□□□□□ -0.26
C11orf49-201ENST00000278460 TRAV13-1A0A0B4J241 112 aa13.44□□□□□ -0.26
C11orf49-201ENST00000278460 TMEM262E9PQX1 116 aa13.44□□□□□ -0.26
C11orf49-201ENST00000278460 HINT1P49773 126 aaPredicted RBP13.44□□□□□ -0.26
C11orf49-201ENST00000278460 RBX1P62877 108 aa13.44□□□□□ -0.26
C11orf49-201ENST00000278460 PLEKHB2Q96CS7 222 aa13.44□□□□□ -0.26
C11orf49-201ENST00000278460 H3BRM9 83 aa13.43□□□□□ -0.26
C11orf49-201ENST00000278460 J3QQQ9 107 aa13.43□□□□□ -0.26
C11orf49-201ENST00000278460 COX6A2Q02221 97 aa13.43□□□□□ -0.26
C11orf49-201ENST00000278460 MPV17L2Q567V2 206 aa13.43□□□□□ -0.26
C11orf49-201ENST00000278460 ZNF815PA8K554 130 aa13.42□□□□□ -0.26
C11orf49-201ENST00000278460 TSPEAR-AS2P59090 65 aa13.42□□□□□ -0.26
C11orf49-201ENST00000278460 CDKN2A-AS1Q9UH64 79 aa13.42□□□□□ -0.26
C11orf49-201ENST00000278460 IGHV1-58A0A0C4DH39 117 aa13.42□□□□□ -0.26
C11orf49-201ENST00000278460 LGALS3P17931 250 aaKnown RBP13.42□□□□□ -0.26
C11orf49-201ENST00000278460 HSD52Q0P140 79 aa13.42□□□□□ -0.26
C11orf49-201ENST00000278460 BATFQ16520 125 aa13.42□□□□□ -0.26
C11orf49-201ENST00000278460 LYPD5Q6UWN5 251 aa13.42□□□□□ -0.26
C11orf49-201ENST00000278460 IGHV3-30-3P0DP02 117 aa13.4□□□□□ -0.26
C11orf49-201ENST00000278460 BVES-AS1Q5T3Y7 98 aa13.4□□□□□ -0.26
C11orf49-201ENST00000278460 B9D2Q9BPU9 175 aa13.4□□□□□ -0.26
C11orf49-201ENST00000278460 DNAH9Q9NYC9 4486 aa13.4□□□□□ -0.26
C11orf49-201ENST00000278460 IGHV3-64A0A075B6Q5 118 aa13.39□□□□□ -0.27
C11orf49-201ENST00000278460 TRAV10A0A0B4J240 114 aa13.39□□□□□ -0.27
C11orf49-201ENST00000278460 SPINK8P0C7L1 97 aa13.39□□□□□ -0.27
C11orf49-201ENST00000278460 KRTAP21-3Q3LHN1 58 aa13.39□□□□□ -0.27
C11orf49-201ENST00000278460 TRAV8-3A0A0A6YYJ7 113 aa13.39□□□□□ -0.27
C11orf49-201ENST00000278460 IGKV3OR2-268A0A0C4DH90 116 aa13.36□□□□□ -0.27
C11orf49-201ENST00000278460 LINC00959A0A1B0GUT2 108 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms