RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CITED1Q99966 193 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 GTSF1LQ9H1H1 148 aa9.39□□□□□ -0.91
C9orf3-201ENST00000277198 IGHV1-58A0A0C4DH39 117 aa9.38□□□□□ -0.91
C9orf3-201ENST00000277198 TINCRA0A1B0GVN0 87 aa9.38□□□□□ -0.91
C9orf3-201ENST00000277198 IGHV3-33P01772 117 aa9.38□□□□□ -0.91
C9orf3-201ENST00000277198 IGHV3-30-3P0DP02 117 aa9.38□□□□□ -0.91
C9orf3-201ENST00000277198 TMEM263Q8WUH6 116 aaKnown RBP9.38□□□□□ -0.91
C9orf3-201ENST00000277198 FAM104AQ969W3 186 aa9.38□□□□□ -0.91
C9orf3-201ENST00000277198 TIMM21Q9BVV7 248 aa9.38□□□□□ -0.91
C9orf3-201ENST00000277198 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
C9orf3-201ENST00000277198 SCGB1C2P0DMR2 95 aa9.37□□□□□ -0.91
C9orf3-201ENST00000277198 SLURP1P55000 103 aa9.37□□□□□ -0.91
C9orf3-201ENST00000277198 BEAN1Q3B7T3 259 aa9.37□□□□□ -0.91
C9orf3-201ENST00000277198 RNF183Q96D59 192 aa9.37□□□□□ -0.91
C9orf3-201ENST00000277198 ERG28Q9UKR5 140 aa9.37□□□□□ -0.91
C9orf3-201ENST00000277198 IGHV3-53P01767 116 aa9.37□□□□□ -0.91
C9orf3-201ENST00000277198 INSL3P51460 131 aa9.37□□□□□ -0.91
C9orf3-201ENST00000277198 MUSTN1Q8IVN3 82 aa9.37□□□□□ -0.91
C9orf3-201ENST00000277198 RAX2Q96IS3 184 aa9.37□□□□□ -0.91
C9orf3-201ENST00000277198 RBMY1BA6NDE4 496 aaKnown RBP9.36□□□□□ -0.91
C9orf3-201ENST00000277198 RBMY1EA6NEQ0 496 aaKnown RBP9.36□□□□□ -0.91
C9orf3-201ENST00000277198 RBMY1DP0C7P1 496 aaKnown RBP9.36□□□□□ -0.91
C9orf3-201ENST00000277198 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
C9orf3-201ENST00000277198 UBE2D4Q9Y2X8 147 aa9.36□□□□□ -0.91
C9orf3-201ENST00000277198 SMAGPQ0VAQ4 97 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 C11orf72Q8NBR9 251 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 LINC01600Q96MT4 127 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 MAP6D1Q9H9H5 199 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 INSP01308 110 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 HTN1P15515 57 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 SFTA2Q6UW10 78 aa9.35□□□□□ -0.91
C9orf3-201ENST00000277198 IGHV3-73A0A0B4J1V6 119 aa9.34□□□□□ -0.91
C9orf3-201ENST00000277198 RS1O15537 224 aa9.34□□□□□ -0.91
C9orf3-201ENST00000277198 DYNLRB2Q8TF09 96 aa9.34□□□□□ -0.91
C9orf3-201ENST00000277198 VSIG2Q96IQ7 327 aa9.34□□□□□ -0.91
C9orf3-201ENST00000277198 LINC01587Q99440 93 aa9.34□□□□□ -0.91
C9orf3-201ENST00000277198 LITAFQ99732 161 aa9.34□□□□□ -0.91
C9orf3-201ENST00000277198 TRAV25A0A0B4J276 109 aa9.33□□□□□ -0.92
C9orf3-201ENST00000277198 TRBV30A0A0K0K1B3 111 aa9.33□□□□□ -0.92
C9orf3-201ENST00000277198 TIMM17BO60830 172 aa9.33□□□□□ -0.92
C9orf3-201ENST00000277198 DEFB114Q30KQ6 69 aa9.33□□□□□ -0.92
C9orf3-201ENST00000277198 IGHV3-64A0A075B6Q5 118 aa9.33□□□□□ -0.92
C9orf3-201ENST00000277198 EIF4EBP3O60516 100 aaPredicted RBP9.33□□□□□ -0.92
C9orf3-201ENST00000277198 TIRAPP58753 221 aa9.33□□□□□ -0.92
C9orf3-201ENST00000277198 DEFB136Q30KP8 78 aa9.33□□□□□ -0.92
C9orf3-201ENST00000277198 NDUFA12Q9UI09 145 aa9.33□□□□□ -0.92
C9orf3-201ENST00000277198 TMEM262E9PQX1 116 aa9.32□□□□□ -0.92
C9orf3-201ENST00000277198 ATXN8Q156A1 80 aa9.32□□□□□ -0.92
C9orf3-201ENST00000277198 C18orf65Q6ZTR6 163 aa9.32□□□□□ -0.92
C9orf3-201ENST00000277198 IGLV5-45A0A087WSX0 123 aa9.32□□□□□ -0.92
C9orf3-201ENST00000277198 SLC25A20O43772 301 aa9.32□□□□□ -0.92
C9orf3-201ENST00000277198 ZFAND6Q6FIF0 208 aa9.32□□□□□ -0.92
C9orf3-201ENST00000277198 Q6ZSN1 163 aa9.32□□□□□ -0.92
C9orf3-201ENST00000277198 CARD19Q96LW7 228 aa9.32□□□□□ -0.92
C9orf3-201ENST00000277198 CDIP1Q9H305 208 aa9.32□□□□□ -0.92
C9orf3-201ENST00000277198 IFITM1P13164 125 aa9.31□□□□□ -0.92
C9orf3-201ENST00000277198 MIAQ16674 131 aa9.31□□□□□ -0.92
C9orf3-201ENST00000277198 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
C9orf3-201ENST00000277198 CEMP1Q6PRD7 247 aaPredicted RBP9.3□□□□□ -0.92
C9orf3-201ENST00000277198 TRAV8-3A0A0A6YYJ7 113 aa9.3□□□□□ -0.92
C9orf3-201ENST00000277198 A0A1B0GV72 72 aa9.3□□□□□ -0.92
C9orf3-201ENST00000277198 ANKRD29Q8N6D5 301 aa9.3□□□□□ -0.92
C9orf3-201ENST00000277198 CIDEAO60543 219 aa9.29□□□□□ -0.92
C9orf3-201ENST00000277198 Q1RN00 199 aa9.29□□□□□ -0.92
C9orf3-201ENST00000277198 FAM19A3Q7Z5A8 133 aa9.29□□□□□ -0.92
C9orf3-201ENST00000277198 CITED2Q99967 270 aaPredicted RBP9.29□□□□□ -0.92
C9orf3-201ENST00000277198 CSDC2Q9Y534 153 aaKnown RBP9.29□□□□□ -0.92
C9orf3-201ENST00000277198 NOTCH3Q9UM47 2321 aa9.29□□□□□ -0.92
C9orf3-201ENST00000277198 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.28□□□□□ -0.92
C9orf3-201ENST00000277198 TRBV10-1A0A0K0K1A3 114 aa9.28□□□□□ -0.92
C9orf3-201ENST00000277198 IGKV2-29A2NJV5 120 aaPredicted RBP9.28□□□□□ -0.92
C9orf3-201ENST00000277198 ADARB2-AS1A8MUL3 147 aa9.28□□□□□ -0.92
C9orf3-201ENST00000277198 C9JAW5 83 aa9.28□□□□□ -0.92
C9orf3-201ENST00000277198 PRSS2P07478 247 aa9.28□□□□□ -0.92
C9orf3-201ENST00000277198 Q6ZUT4 128 aa9.28□□□□□ -0.92
C9orf3-201ENST00000277198 IL17DQ8TAD2 202 aa9.28□□□□□ -0.92
C9orf3-201ENST00000277198 COX6CP09669 75 aa9.28□□□□□ -0.92
C9orf3-201ENST00000277198 Q9UF83 564 aa9.28□□□□□ -0.92
C9orf3-201ENST00000277198 A0A1W2PRX2 142 aa9.27□□□□□ -0.93
C9orf3-201ENST00000277198 NDUFA1O15239 70 aa9.27□□□□□ -0.93
C9orf3-201ENST00000277198 PRM2P04554 102 aa9.27□□□□□ -0.93
C9orf3-201ENST00000277198 HERVK_113P63121 156 aa9.27□□□□□ -0.93
C9orf3-201ENST00000277198 LINC01620Q4KN68 170 aa9.27□□□□□ -0.93
C9orf3-201ENST00000277198 KHDC1LQ5JSQ8 128 aa9.27□□□□□ -0.93
C9orf3-201ENST00000277198 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.93
C9orf3-201ENST00000277198 DGAT2L7PQ6IED9 249 aa9.27□□□□□ -0.93
C9orf3-201ENST00000277198 TRBV10-2A0A0K0K1G8 114 aa9.26□□□□□ -0.93
C9orf3-201ENST00000277198 SPINK8P0C7L1 97 aa9.26□□□□□ -0.93
C9orf3-201ENST00000277198 CIRBPQ14011 172 aaKnown RBP9.26□□□□□ -0.93
C9orf3-201ENST00000277198 STHQ8IWL8 128 aa9.26□□□□□ -0.93
C9orf3-201ENST00000277198 COPS9Q8WXC6 57 aa9.26□□□□□ -0.93
C9orf3-201ENST00000277198 RPL13AP40429 203 aaKnown RBP9.26□□□□□ -0.93
C9orf3-201ENST00000277198 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
C9orf3-201ENST00000277198 DAZ2Q13117 558 aaKnown RBP9.26□□□□□ -0.93
C9orf3-201ENST00000277198 FHL3Q13643 280 aa9.26□□□□□ -0.93
C9orf3-201ENST00000277198 ODF3L2Q3SX64 289 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 295.9 ms