RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 J3KRW8 73 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 IGHG2P01859 326 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 EMP1P54849 157 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 MRPS36P82909 103 aaKnown RBP7.57□□□□□ -1.2
UPF3B-201ENST00000276201 C10orf99Q6UWK7 81 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 RAX2Q96IS3 184 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 TRRAPQ9Y4A5 3859 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 VWFP04275 2813 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 PKD1L1Q8TDX9 2849 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 MGAM2Q2M2H8 2515 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 IGLV4-3A0A075B6K6 122 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 TRAV2A0A0B4J234 112 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 TTC32Q5I0X7 151 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 WNK1Q9H4A3 2382 aa7.57□□□□□ -1.2
UPF3B-201ENST00000276201 TRAV4A0A0B4J268 109 aa7.56□□□□□ -1.2
UPF3B-201ENST00000276201 NBEAL1Q6ZS30 2694 aa7.56□□□□□ -1.2
UPF3B-201ENST00000276201 TRIAP1O43715 76 aa7.56□□□□□ -1.2
UPF3B-201ENST00000276201 CITED2Q99967 270 aaPredicted RBP7.56□□□□□ -1.2
UPF3B-201ENST00000276201 RHPN1-AS1Q9BWJ2 59 aa7.56□□□□□ -1.2
UPF3B-201ENST00000276201 LINC00527Q9UJ94 153 aa7.56□□□□□ -1.2
UPF3B-201ENST00000276201 TRBV7-7A0A0K0K1E9 115 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 ADARB2-AS1A8MUL3 147 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 F5H697 171 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 COX6CP09669 75 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 FAM110AQ9BQ89 295 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 JPT2Q9H910 190 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 DAZ1Q9NQZ3 744 aaKnown RBP7.55□□□□□ -1.2
UPF3B-201ENST00000276201 SS18L2Q9UHA2 77 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 ICOSQ9Y6W8 199 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 F6UB75 175 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 TRBV12-3P01733 135 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 MIAQ16674 131 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 C15orf53Q8NAA6 179 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 DCANP1Q8TF63 244 aa7.55□□□□□ -1.2
UPF3B-201ENST00000276201 A0A087WWL8 130 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 IGHV1-58A0A0C4DH39 117 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 B5MCH6 92 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 H7C423 109 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 LST1O00453 97 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 ELANEP08246 267 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 IGHV3-30-3P0DP02 117 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 PIK3CD-AS1Q5SR53 167 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 IMUPQ9GZP8 106 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 IGLV1-40P01703 118 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 ACYP1P07311 99 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 Q1RN00 199 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 C2orf82Q6UX34 121 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 TIMM21Q9BVV7 248 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 PPDPFQ9H3Y8 114 aa7.54□□□□□ -1.2
UPF3B-201ENST00000276201 A0A0J9YXV3 536 aa7.53□□□□□ -1.2
UPF3B-201ENST00000276201 TINCRA0A1B0GVN0 87 aa7.53□□□□□ -1.2
UPF3B-201ENST00000276201 DEFB1P60022 68 aa7.53□□□□□ -1.2
UPF3B-201ENST00000276201 IGHV1OR15-1A0A075B7D0 117 aa7.53□□□□□ -1.2
UPF3B-201ENST00000276201 TEX49A0A1B0GTD5 131 aa7.53□□□□□ -1.2
UPF3B-201ENST00000276201 A0A1W2PRX2 142 aa7.53□□□□□ -1.2
UPF3B-201ENST00000276201 CFHR3Q02985 330 aa7.53□□□□□ -1.2
UPF3B-201ENST00000276201 FAM104AQ969W3 186 aa7.53□□□□□ -1.2
UPF3B-201ENST00000276201 TRGV11A0A075B6L2 103 aa7.52□□□□□ -1.21
UPF3B-201ENST00000276201 ZNF56Q15929 161 aa7.52□□□□□ -1.21
UPF3B-201ENST00000276201 TMEM61Q8N0U2 210 aa7.52□□□□□ -1.21
UPF3B-201ENST00000276201 VSIG2Q96IQ7 327 aa7.52□□□□□ -1.21
UPF3B-201ENST00000276201 TRAV12-3A0A0B4J271 114 aa7.51□□□□□ -1.21
UPF3B-201ENST00000276201 CCDC179H3BU77 68 aa7.51□□□□□ -1.21
UPF3B-201ENST00000276201 OPRPNQ99935 248 aaPredicted RBP7.51□□□□□ -1.21
UPF3B-201ENST00000276201 RPL11P62913 178 aaKnown RBP7.51□□□□□ -1.21
UPF3B-201ENST00000276201 KHDC1LQ5JSQ8 128 aa7.51□□□□□ -1.21
UPF3B-201ENST00000276201 TMEM126AQ9H061 195 aa7.51□□□□□ -1.21
UPF3B-201ENST00000276201 NDUFA12Q9UI09 145 aa7.51□□□□□ -1.21
UPF3B-201ENST00000276201 C18orf65Q6ZTR6 163 aa7.5□□□□□ -1.21
UPF3B-201ENST00000276201 IGLV5-45A0A087WSX0 123 aa7.49□□□□□ -1.21
UPF3B-201ENST00000276201 H7C2G1 150 aa7.49□□□□□ -1.21
UPF3B-201ENST00000276201 CMYA5Q8N3K9 4069 aa7.49□□□□□ -1.21
UPF3B-201ENST00000276201 A8MTW9 85 aa7.49□□□□□ -1.21
UPF3B-201ENST00000276201 K7EQG2 157 aa7.49□□□□□ -1.21
UPF3B-201ENST00000276201 PSMB8P28062 276 aa7.49□□□□□ -1.21
UPF3B-201ENST00000276201 TIRAPP58753 221 aa7.49□□□□□ -1.21
UPF3B-201ENST00000276201 FAM74A4Q5TZK3 123 aa7.49□□□□□ -1.21
UPF3B-201ENST00000276201 ADAMTSL4-AS1Q5T5F5 129 aa7.48□□□□□ -1.21
UPF3B-201ENST00000276201 SDIM1Q6ZPB5 146 aa7.48□□□□□ -1.21
UPF3B-201ENST00000276201 COPS9Q8WXC6 57 aa7.48□□□□□ -1.21
UPF3B-201ENST00000276201 NDUFA1O15239 70 aa7.48□□□□□ -1.21
UPF3B-201ENST00000276201 ATP5G1P05496 136 aa7.48□□□□□ -1.21
UPF3B-201ENST00000276201 SNRPD3P62318 126 aaKnown RBP7.48□□□□□ -1.21
UPF3B-201ENST00000276201 NOTCH1P46531 2555 aa7.48□□□□□ -1.21
UPF3B-201ENST00000276201 PF4V1P10720 104 aa7.47□□□□□ -1.21
UPF3B-201ENST00000276201 FAM19A3Q7Z5A8 133 aa7.47□□□□□ -1.21
UPF3B-201ENST00000276201 TMEM101Q96IK0 257 aa7.47□□□□□ -1.21
UPF3B-201ENST00000276201 DNAJC30Q96LL9 226 aa7.47□□□□□ -1.21
UPF3B-201ENST00000276201 SPXQ9BT56 116 aa7.47□□□□□ -1.21
UPF3B-201ENST00000276201 IGHV3-11P01762 117 aa7.46□□□□□ -1.21
UPF3B-201ENST00000276201 CHCHD7Q9BUK0 85 aa7.46□□□□□ -1.21
UPF3B-201ENST00000276201 UBE2D4Q9Y2X8 147 aa7.46□□□□□ -1.21
UPF3B-201ENST00000276201 MEGF8Q7Z7M0 2845 aa7.46□□□□□ -1.22
UPF3B-201ENST00000276201 NOTCH3Q9UM47 2321 aa7.46□□□□□ -1.22
UPF3B-201ENST00000276201 IGHV3-64A0A075B6Q5 118 aa7.46□□□□□ -1.22
UPF3B-201ENST00000276201 C4orf3Q8WVX3 66 aa7.46□□□□□ -1.22
UPF3B-201ENST00000276201 LINC00467Q9BRT7 94 aa7.46□□□□□ -1.22
UPF3B-201ENST00000276201 TRACP01848 142 aa7.45□□□□□ -1.22
UPF3B-201ENST00000276201 PF4P02776 101 aa7.45□□□□□ -1.22
UPF3B-201ENST00000276201 PRSS2P07478 247 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms