RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 UBE2D2P62837 147 aa8.6□□□□□ -1.03
CLSTN3-201ENST00000266546 U3KQE9 123 aa8.6□□□□□ -1.03
CLSTN3-201ENST00000266546 IGLV4-3A0A075B6K6 122 aa8.6□□□□□ -1.03
CLSTN3-201ENST00000266546 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
CLSTN3-201ENST00000266546 A0A1B0GX51 115 aa8.6□□□□□ -1.03
CLSTN3-201ENST00000266546 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
CLSTN3-201ENST00000266546 PSCAO43653 123 aa8.6□□□□□ -1.03
CLSTN3-201ENST00000266546 IGLV2-18A0A075B6J9 118 aa8.59□□□□□ -1.03
CLSTN3-201ENST00000266546 IGKV3D-7A0A0C4DH55 119 aa8.59□□□□□ -1.03
CLSTN3-201ENST00000266546 J3KT08 172 aa8.59□□□□□ -1.03
CLSTN3-201ENST00000266546 IGHV4OR15-8A0A075B7B6 117 aa8.59□□□□□ -1.03
CLSTN3-201ENST00000266546 A0A087WW49 117 aa8.59□□□□□ -1.03
CLSTN3-201ENST00000266546 RNASE3P12724 160 aaKnown RBP8.59□□□□□ -1.03
CLSTN3-201ENST00000266546 POLR2KP53803 58 aaKnown RBP8.59□□□□□ -1.03
CLSTN3-201ENST00000266546 CFHR3Q02985 330 aa8.59□□□□□ -1.03
CLSTN3-201ENST00000266546 TEP1Q99973 2627 aaKnown RBP8.59□□□□□ -1.04
CLSTN3-201ENST00000266546 A0A0J9YX75 114 aa8.58□□□□□ -1.04
CLSTN3-201ENST00000266546 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
CLSTN3-201ENST00000266546 NXPH4O95158 308 aa8.58□□□□□ -1.04
CLSTN3-201ENST00000266546 SS18Q15532 418 aa8.58□□□□□ -1.04
CLSTN3-201ENST00000266546 CCL24O00175 119 aa8.58□□□□□ -1.04
CLSTN3-201ENST00000266546 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
CLSTN3-201ENST00000266546 IGLV1-40P01703 118 aa8.58□□□□□ -1.04
CLSTN3-201ENST00000266546 M0QY20 66 aa8.57□□□□□ -1.04
CLSTN3-201ENST00000266546 H0YGX0 51 aa8.57□□□□□ -1.04
CLSTN3-201ENST00000266546 DNAJC9-AS1A6NH13 148 aa8.57□□□□□ -1.04
CLSTN3-201ENST00000266546 ANKRD17O75179 2603 aaKnown RBP8.57□□□□□ -1.04
CLSTN3-201ENST00000266546 HAMPP81172 84 aa8.57□□□□□ -1.04
CLSTN3-201ENST00000266546 TRBV6-5A0A0K0K1A5 114 aa8.56□□□□□ -1.04
CLSTN3-201ENST00000266546 IGIPA6NJ69 53 aa8.56□□□□□ -1.04
CLSTN3-201ENST00000266546 F5H768 121 aa8.56□□□□□ -1.04
CLSTN3-201ENST00000266546 F8W735 103 aaPredicted RBP8.56□□□□□ -1.04
CLSTN3-201ENST00000266546 COX7A2LO14548 114 aa8.56□□□□□ -1.04
CLSTN3-201ENST00000266546 ATP5G1P05496 136 aa8.56□□□□□ -1.04
CLSTN3-201ENST00000266546 TMEM263Q8WUH6 116 aaKnown RBP8.56□□□□□ -1.04
CLSTN3-201ENST00000266546 CDIP1Q9H305 208 aa8.56□□□□□ -1.04
CLSTN3-201ENST00000266546 UQCRQO14949 82 aa8.56□□□□□ -1.04
CLSTN3-201ENST00000266546 CLPSL1A2RUU4 121 aa8.55□□□□□ -1.04
CLSTN3-201ENST00000266546 PSMB8P28062 276 aa8.55□□□□□ -1.04
CLSTN3-201ENST00000266546 SLURP1P55000 103 aa8.55□□□□□ -1.04
CLSTN3-201ENST00000266546 ORMDL1Q9P0S3 153 aa8.55□□□□□ -1.04
CLSTN3-201ENST00000266546 CDKN2A-AS1Q9UH64 79 aa8.55□□□□□ -1.04
CLSTN3-201ENST00000266546 DAZ2Q13117 558 aaKnown RBP8.55□□□□□ -1.04
CLSTN3-201ENST00000266546 DAZ4Q86SG3 579 aaKnown RBP8.55□□□□□ -1.04
CLSTN3-201ENST00000266546 DAZ3Q9NR90 486 aaKnown RBP8.55□□□□□ -1.04
CLSTN3-201ENST00000266546 C4orf3Q8WVX3 66 aa8.55□□□□□ -1.04
CLSTN3-201ENST00000266546 Q9HAA7 133 aa8.55□□□□□ -1.04
CLSTN3-201ENST00000266546 LY6G6DO95868 133 aa8.54□□□□□ -1.04
CLSTN3-201ENST00000266546 RBMY1FQ15415 496 aaKnown RBP8.54□□□□□ -1.04
CLSTN3-201ENST00000266546 KLK9Q2XQG4 91 aa8.54□□□□□ -1.04
CLSTN3-201ENST00000266546 ZNF702PQ9H963 129 aa8.54□□□□□ -1.04
CLSTN3-201ENST00000266546 CRLF1O75462 422 aa8.54□□□□□ -1.04
CLSTN3-201ENST00000266546 Q6Q795 121 aa8.54□□□□□ -1.04
CLSTN3-201ENST00000266546 CFAP46Q8IYW2 2715 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 IGLV4-69A0A075B6H9 119 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 LST1O00453 97 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 FREM2Q5SZK8 3169 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 LECT2O14960 151 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 DAD1P61803 113 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 C5orf38Q86SI9 138 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 TMEM61Q8N0U2 210 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 A8MZ25 164 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 APRG1Q8IVJ8 170 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 PRO0461Q9UI25 63 aa8.53□□□□□ -1.04
CLSTN3-201ENST00000266546 H7C423 109 aa8.52□□□□□ -1.04
CLSTN3-201ENST00000266546 C10orf99Q6UWK7 81 aa8.52□□□□□ -1.04
CLSTN3-201ENST00000266546 TSHBP01222 138 aa8.52□□□□□ -1.05
CLSTN3-201ENST00000266546 MIR7-3HGQ8N6C7 128 aa8.52□□□□□ -1.05
CLSTN3-201ENST00000266546 APOC4P55056 127 aa8.52□□□□□ -1.05
CLSTN3-201ENST00000266546 LINC00308Q8TCZ7 52 aa8.52□□□□□ -1.05
CLSTN3-201ENST00000266546 ODF3Q96PU9 254 aa8.52□□□□□ -1.05
CLSTN3-201ENST00000266546 TRAV25A0A0B4J276 109 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 C3orf22Q8N5N4 141 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 RNF152Q8N8N0 203 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 HIST2H2BDQ6DRA6 164 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 COX7B2Q8TF08 81 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 IMUPQ9GZP8 106 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 NOP10Q9NPE3 64 aaKnown RBP8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 ITPR3Q14573 2671 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 LINC01546A6NGU7 62 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 KLLNB2CW77 178 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 SMCPP49901 116 aaPredicted RBP8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 Q6ZSV7 163 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 SMR3AQ99954 134 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 C14orf132Q9NPU4 83 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 PYGO1Q9Y3Y4 419 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 NBEAQ8NFP9 2946 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 FSHBP01225 129 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 LINC00467Q9BRT7 94 aa8.51□□□□□ -1.05
CLSTN3-201ENST00000266546 SVIPQ8NHG7 77 aa8.5□□□□□ -1.05
CLSTN3-201ENST00000266546 A0A096LNT2 108 aa8.5□□□□□ -1.05
CLSTN3-201ENST00000266546 C9orf66Q5T8R8 295 aa8.5□□□□□ -1.05
CLSTN3-201ENST00000266546 CRYGDP07320 174 aa8.5□□□□□ -1.05
CLSTN3-201ENST00000266546 K7EQD1 137 aa8.49□□□□□ -1.05
CLSTN3-201ENST00000266546 K7EQG2 157 aa8.49□□□□□ -1.05
CLSTN3-201ENST00000266546 XCL1P47992 114 aa8.49□□□□□ -1.05
CLSTN3-201ENST00000266546 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
CLSTN3-201ENST00000266546 BOD1L1Q8NFC6 3051 aa8.49□□□□□ -1.05
CLSTN3-201ENST00000266546 SDIM1Q6ZPB5 146 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms