RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 P0DMU3 169 aa13.18□□□□□ -0.3
NOTCH3-201ENST00000263388 FAM231AP0DMU4 169 aa13.18□□□□□ -0.3
NOTCH3-201ENST00000263388 FAM231CP0DMU5 169 aa13.18□□□□□ -0.3
NOTCH3-201ENST00000263388 PKD1L2Q7Z442 2459 aa13.18□□□□□ -0.3
NOTCH3-201ENST00000263388 FRMD6-AS1P0C7T7 363 aa13.18□□□□□ -0.3
NOTCH3-201ENST00000263388 A6NDX4 124 aa13.18□□□□□ -0.3
NOTCH3-201ENST00000263388 IBA57-AS1B1ANH7 110 aa13.18□□□□□ -0.3
NOTCH3-201ENST00000263388 C11orf45Q8TAV5 145 aa13.17□□□□□ -0.3
NOTCH3-201ENST00000263388 SPRY4Q9C004 299 aa13.17□□□□□ -0.3
NOTCH3-201ENST00000263388 SERP2Q8N6R1 65 aa13.17□□□□□ -0.3
NOTCH3-201ENST00000263388 DNAJC9-AS1A6NH13 148 aa13.17□□□□□ -0.3
NOTCH3-201ENST00000263388 PCSK5Q92824 1860 aa13.16□□□□□ -0.3
NOTCH3-201ENST00000263388 ODF3BA8MYP8 253 aa13.16□□□□□ -0.3
NOTCH3-201ENST00000263388 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
NOTCH3-201ENST00000263388 TNFRSF13BO14836 293 aaPredicted RBP13.16□□□□□ -0.3
NOTCH3-201ENST00000263388 CEMP1Q6PRD7 247 aaPredicted RBP13.16□□□□□ -0.3
NOTCH3-201ENST00000263388 TMEM223A0PJW6 202 aa13.16□□□□□ -0.3
NOTCH3-201ENST00000263388 FSTL3O95633 263 aa13.16□□□□□ -0.3
NOTCH3-201ENST00000263388 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.3
NOTCH3-201ENST00000263388 IGLV2-8P01709 118 aa13.15□□□□□ -0.3
NOTCH3-201ENST00000263388 NRGNQ92686 78 aa13.15□□□□□ -0.31
NOTCH3-201ENST00000263388 SPTBN4Q9H254 2564 aa13.15□□□□□ -0.31
NOTCH3-201ENST00000263388 IGF1P05019 195 aa13.14□□□□□ -0.31
NOTCH3-201ENST00000263388 JMJD1CQ15652 2540 aa13.14□□□□□ -0.31
NOTCH3-201ENST00000263388 MRPS36P82909 103 aaKnown RBP13.14□□□□□ -0.31
NOTCH3-201ENST00000263388 U3KQK5 164 aa13.14□□□□□ -0.31
NOTCH3-201ENST00000263388 GDF5OSQ5U4N7 250 aa13.14□□□□□ -0.31
NOTCH3-201ENST00000263388 ACANP16112 2415 aa13.14□□□□□ -0.31
NOTCH3-201ENST00000263388 PRRC2CQ9Y520 2896 aaKnown RBP13.13□□□□□ -0.31
NOTCH3-201ENST00000263388 TRBV30A0A0K0K1B3 111 aa13.13□□□□□ -0.31
NOTCH3-201ENST00000263388 TP53TG3Q9ULZ0 132 aa13.13□□□□□ -0.31
NOTCH3-201ENST00000263388 LOXL1Q08397 574 aaPredicted RBP13.13□□□□□ -0.31
NOTCH3-201ENST00000263388 C1orf195Q5TG92 126 aa13.13□□□□□ -0.31
NOTCH3-201ENST00000263388 TIMM17BO60830 172 aa13.13□□□□□ -0.31
NOTCH3-201ENST00000263388 CRYGDP07320 174 aa13.13□□□□□ -0.31
NOTCH3-201ENST00000263388 CHCHD10Q8WYQ3 142 aaPredicted RBP13.12□□□□□ -0.31
NOTCH3-201ENST00000263388 HIGD2AQ9BW72 106 aa13.12□□□□□ -0.31
NOTCH3-201ENST00000263388 IGLV4-3A0A075B6K6 122 aa13.12□□□□□ -0.31
NOTCH3-201ENST00000263388 WFDC11Q8NEX6 87 aa13.11□□□□□ -0.31
NOTCH3-201ENST00000263388 LINC00308Q8TCZ7 52 aa13.11□□□□□ -0.31
NOTCH3-201ENST00000263388 Q6ZTI0 123 aa13.11□□□□□ -0.31
NOTCH3-201ENST00000263388 TRIAP1O43715 76 aa13.1□□□□□ -0.31
NOTCH3-201ENST00000263388 CDKN2A-AS1Q9UH64 79 aa13.1□□□□□ -0.31
NOTCH3-201ENST00000263388 Q8N9L7 120 aa13.1□□□□□ -0.31
NOTCH3-201ENST00000263388 CCKP06307 115 aa13.1□□□□□ -0.31
NOTCH3-201ENST00000263388 K7EQG2 157 aa13.1□□□□□ -0.31
NOTCH3-201ENST00000263388 ZNF706Q9Y5V0 76 aaPredicted RBP13.1□□□□□ -0.31
NOTCH3-201ENST00000263388 C9orf85Q96MD7 179 aa13.09□□□□□ -0.31
NOTCH3-201ENST00000263388 CFAP126Q5VTH2 177 aa13.09□□□□□ -0.31
NOTCH3-201ENST00000263388 M0QY20 66 aa13.09□□□□□ -0.31
NOTCH3-201ENST00000263388 EIF4EBP1Q13541 118 aaPredicted RBP13.09□□□□□ -0.31
NOTCH3-201ENST00000263388 A0A087WZ39 114 aa13.08□□□□□ -0.31
NOTCH3-201ENST00000263388 TRBV6-8A0A0A6YYG3 113 aa13.08□□□□□ -0.31
NOTCH3-201ENST00000263388 IGKV2-24A0A0C4DH68 120 aa13.08□□□□□ -0.32
NOTCH3-201ENST00000263388 F8P00451 2351 aa13.08□□□□□ -0.32
NOTCH3-201ENST00000263388 FAM222AQ5U5X8 452 aa13.08□□□□□ -0.32
NOTCH3-201ENST00000263388 DHRS4-AS1Q9P1J3 65 aa13.07□□□□□ -0.32
NOTCH3-201ENST00000263388 DEFB114Q30KQ6 69 aa13.07□□□□□ -0.32
NOTCH3-201ENST00000263388 FAM19A1Q7Z5A9 133 aa13.07□□□□□ -0.32
NOTCH3-201ENST00000263388 MSMPQ1L6U9 139 aa13.06□□□□□ -0.32
NOTCH3-201ENST00000263388 TRBV27A0A0K0K1C4 114 aa13.06□□□□□ -0.32
NOTCH3-201ENST00000263388 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
NOTCH3-201ENST00000263388 C1orf158Q8N1D5 194 aa13.06□□□□□ -0.32
NOTCH3-201ENST00000263388 SNURFQ9Y675 71 aa13.06□□□□□ -0.32
NOTCH3-201ENST00000263388 HILS1P60008 231 aa13.06□□□□□ -0.32
NOTCH3-201ENST00000263388 Q6YL49 198 aa13.06□□□□□ -0.32
NOTCH3-201ENST00000263388 COX17Q14061 63 aa13.05□□□□□ -0.32
NOTCH3-201ENST00000263388 PYGO1Q9Y3Y4 419 aa13.05□□□□□ -0.32
NOTCH3-201ENST00000263388 C3orf84H3BNL1 204 aa13.05□□□□□ -0.32
NOTCH3-201ENST00000263388 SCXQ7RTU7 201 aa13.05□□□□□ -0.32
NOTCH3-201ENST00000263388 LMO4P61968 165 aa13.05□□□□□ -0.32
NOTCH3-201ENST00000263388 Q8NA96 180 aa13.05□□□□□ -0.32
NOTCH3-201ENST00000263388 C7orf33Q8WU49 177 aa13.05□□□□□ -0.32
NOTCH3-201ENST00000263388 MIFP14174 115 aa13.04□□□□□ -0.32
NOTCH3-201ENST00000263388 MBD6Q96DN6 1003 aa13.04□□□□□ -0.32
NOTCH3-201ENST00000263388 COX7CP15954 63 aa13.04□□□□□ -0.32
NOTCH3-201ENST00000263388 ZFAND3Q9H8U3 227 aa13.04□□□□□ -0.32
NOTCH3-201ENST00000263388 TRBV6-4A0A1B0GX49 114 aa13.03□□□□□ -0.32
NOTCH3-201ENST00000263388 USP9YO00507 2555 aaPredicted RBP13.03□□□□□ -0.32
NOTCH3-201ENST00000263388 CRIP1P50238 77 aa13.03□□□□□ -0.32
NOTCH3-201ENST00000263388 A0A1W2PNU3 283 aaPredicted RBP13.03□□□□□ -0.32
NOTCH3-201ENST00000263388 TP73-AS1Q9UF72 201 aa13.03□□□□□ -0.32
NOTCH3-201ENST00000263388 LRRC75A-AS1Q8N1F1 130 aa13.03□□□□□ -0.32
NOTCH3-201ENST00000263388 ZNF295-AS1Q8N0V1 137 aa13.02□□□□□ -0.32
NOTCH3-201ENST00000263388 A0A0J9YWU9 116 aa13.02□□□□□ -0.32
NOTCH3-201ENST00000263388 RNF185Q96GF1 192 aa13.02□□□□□ -0.32
NOTCH3-201ENST00000263388 DEFB131BA0A096LNP1 70 aa13.02□□□□□ -0.32
NOTCH3-201ENST00000263388 BRWD1-AS2P59051 145 aa13.02□□□□□ -0.33
NOTCH3-201ENST00000263388 NRACQ8N912 160 aa13.01□□□□□ -0.33
NOTCH3-201ENST00000263388 LINC01548A6NM66 108 aa13.01□□□□□ -0.33
NOTCH3-201ENST00000263388 PMAIP1Q13794 54 aa13.01□□□□□ -0.33
NOTCH3-201ENST00000263388 LRCOL1A6NCL2 159 aa13□□□□□ -0.33
NOTCH3-201ENST00000263388 YPEL4Q96NS1 127 aa13□□□□□ -0.33
NOTCH3-201ENST00000263388 LY6LH3BQJ8 138 aa13□□□□□ -0.33
NOTCH3-201ENST00000263388 IGHV4-31P0DP07 118 aa13□□□□□ -0.33
NOTCH3-201ENST00000263388 TRBV6-5A0A0K0K1A5 114 aa13□□□□□ -0.33
NOTCH3-201ENST00000263388 SLPIP03973 132 aa12.99□□□□□ -0.33
NOTCH3-201ENST00000263388 Q6ZPA2 131 aa12.99□□□□□ -0.33
NOTCH3-201ENST00000263388 UBE2D1P51668 147 aa12.99□□□□□ -0.33
NOTCH3-201ENST00000263388 EBI3Q14213 229 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms