RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 PLXNA4Q9HCM2 1894 aa11.02□□□□□ -0.65
CCDC6-201ENST00000263102 IBA57-AS1B1ANH7 110 aa11.02□□□□□ -0.65
CCDC6-201ENST00000263102 A8MZ25 164 aa11.01□□□□□ -0.65
CCDC6-201ENST00000263102 PLA2G1BP04054 148 aaKnown RBP11.01□□□□□ -0.65
CCDC6-201ENST00000263102 A6NED7 52 aa11.01□□□□□ -0.65
CCDC6-201ENST00000263102 FRMD6-AS1P0C7T7 363 aa11.01□□□□□ -0.65
CCDC6-201ENST00000263102 POM121L12Q8N7R1 296 aa11.01□□□□□ -0.65
CCDC6-201ENST00000263102 CD164L2Q6UWJ8 174 aa11□□□□□ -0.65
CCDC6-201ENST00000263102 TMEM223A0PJW6 202 aa11□□□□□ -0.65
CCDC6-201ENST00000263102 Q6ZSR3 168 aa11□□□□□ -0.65
CCDC6-201ENST00000263102 PSMG3-AS1Q96PY0 264 aa11□□□□□ -0.65
CCDC6-201ENST00000263102 CREBBPQ92793 2442 aa11□□□□□ -0.65
CCDC6-201ENST00000263102 Q6ZQY7 126 aa10.99□□□□□ -0.65
CCDC6-201ENST00000263102 SNURFQ9Y675 71 aa10.99□□□□□ -0.65
CCDC6-201ENST00000263102 TRBV6-5A0A0K0K1A5 114 aa10.99□□□□□ -0.65
CCDC6-201ENST00000263102 IGLV4-3A0A075B6K6 122 aa10.99□□□□□ -0.65
CCDC6-201ENST00000263102 C6orf223Q8N319 242 aa10.99□□□□□ -0.65
CCDC6-201ENST00000263102 RLFQ13129 1914 aa10.99□□□□□ -0.65
CCDC6-201ENST00000263102 ADAMTS9Q9P2N4 1935 aa10.99□□□□□ -0.65
CCDC6-201ENST00000263102 PCNX1Q96RV3 2341 aa10.99□□□□□ -0.65
CCDC6-201ENST00000263102 SPTAN1Q13813 2472 aaKnown RBP10.98□□□□□ -0.65
CCDC6-201ENST00000263102 XGP55808 180 aa10.98□□□□□ -0.65
CCDC6-201ENST00000263102 LINC00308Q8TCZ7 52 aa10.98□□□□□ -0.65
CCDC6-201ENST00000263102 MALRD1Q5VYJ5 2156 aa10.97□□□□□ -0.65
CCDC6-201ENST00000263102 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
CCDC6-201ENST00000263102 LINC00959A0A1B0GUT2 108 aa10.97□□□□□ -0.65
CCDC6-201ENST00000263102 LST1O00453 97 aa10.96□□□□□ -0.65
CCDC6-201ENST00000263102 CDPF1Q6NVV7 123 aa10.96□□□□□ -0.65
CCDC6-201ENST00000263102 Q6ZS46 218 aa10.96□□□□□ -0.65
CCDC6-201ENST00000263102 KRTAP10-9P60411 292 aa10.95□□□□□ -0.66
CCDC6-201ENST00000263102 TDRG1Q3Y452 100 aa10.95□□□□□ -0.66
CCDC6-201ENST00000263102 NDUFV3P56181 108 aaKnown RBP10.95□□□□□ -0.66
CCDC6-201ENST00000263102 REG3GQ6UW15 175 aa10.95□□□□□ -0.66
CCDC6-201ENST00000263102 SPRY4Q9C004 299 aa10.95□□□□□ -0.66
CCDC6-201ENST00000263102 HIGD1BQ9P298 99 aa10.95□□□□□ -0.66
CCDC6-201ENST00000263102 GPR179Q6PRD1 2367 aa10.95□□□□□ -0.66
CCDC6-201ENST00000263102 ZNF22P17026 224 aaPredicted RBP10.95□□□□□ -0.66
CCDC6-201ENST00000263102 LINC00643Q86TS7 51 aa10.95□□□□□ -0.66
CCDC6-201ENST00000263102 HIVEP2P31629 2446 aa10.95□□□□□ -0.66
CCDC6-201ENST00000263102 TNCP24821 2201 aa10.94□□□□□ -0.66
CCDC6-201ENST00000263102 ZNF73O43830 326 aaPredicted RBP10.93□□□□□ -0.66
CCDC6-201ENST00000263102 NBASA2RRP1 2371 aa10.93□□□□□ -0.66
CCDC6-201ENST00000263102 M0QY20 66 aa10.93□□□□□ -0.66
CCDC6-201ENST00000263102 MRGPRG-AS1Q2M3A8 158 aa10.93□□□□□ -0.66
CCDC6-201ENST00000263102 Q6ZTC4 211 aa10.93□□□□□ -0.66
CCDC6-201ENST00000263102 IGLC6P0CF74 106 aa10.92□□□□□ -0.66
CCDC6-201ENST00000263102 TANC1Q9C0D5 1861 aa10.92□□□□□ -0.66
CCDC6-201ENST00000263102 PCNX2A6NKB5 2137 aa10.92□□□□□ -0.66
CCDC6-201ENST00000263102 C11orf71Q6IPW1 123 aa10.92□□□□□ -0.66
CCDC6-201ENST00000263102 TMEM131Q92545 1883 aa10.92□□□□□ -0.66
CCDC6-201ENST00000263102 FAM240AA0A1B0GVK7 77 aa10.92□□□□□ -0.66
CCDC6-201ENST00000263102 PTPRQQ9UMZ3 2332 aa10.91□□□□□ -0.66
CCDC6-201ENST00000263102 SIP14410 1827 aa10.91□□□□□ -0.66
CCDC6-201ENST00000263102 MED13Q9UHV7 2174 aa10.91□□□□□ -0.66
CCDC6-201ENST00000263102 CELA1Q9UNI1 258 aa10.91□□□□□ -0.66
CCDC6-201ENST00000263102 CYSRT1A8MQ03 144 aa10.91□□□□□ -0.66
CCDC6-201ENST00000263102 NDUFC2-KCTD14E9PQ53 114 aa10.91□□□□□ -0.66
CCDC6-201ENST00000263102 G3V4G9 280 aa10.91□□□□□ -0.66
CCDC6-201ENST00000263102 TRBV27A0A0K0K1C4 114 aa10.9□□□□□ -0.66
CCDC6-201ENST00000263102 C10orf91Q5T1B1 145 aa10.9□□□□□ -0.66
CCDC6-201ENST00000263102 C2orf48Q96LS8 159 aa10.89□□□□□ -0.67
CCDC6-201ENST00000263102 A0A1B0GXF2 115 aa10.89□□□□□ -0.67
CCDC6-201ENST00000263102 J3QL48 77 aa10.89□□□□□ -0.67
CCDC6-201ENST00000263102 PLXNA2O75051 1894 aa10.88□□□□□ -0.67
CCDC6-201ENST00000263102 FAM19A3Q7Z5A8 133 aa10.88□□□□□ -0.67
CCDC6-201ENST00000263102 C9orf116Q5BN46 136 aaPredicted RBP10.88□□□□□ -0.67
CCDC6-201ENST00000263102 TRIAP1O43715 76 aa10.87□□□□□ -0.67
CCDC6-201ENST00000263102 PCOTHQ58A44 107 aa10.87□□□□□ -0.67
CCDC6-201ENST00000263102 TRBV7-6A0A0J9YX20 115 aa10.87□□□□□ -0.67
CCDC6-201ENST00000263102 C1orf229Q6ZS94 237 aaPredicted RBP10.87□□□□□ -0.67
CCDC6-201ENST00000263102 NDUFA7O95182 113 aa10.86□□□□□ -0.67
CCDC6-201ENST00000263102 COA6Q5JTJ3 125 aaKnown RBP10.86□□□□□ -0.67
CCDC6-201ENST00000263102 UNQ6190/PRO20217Q6UXQ8 127 aa10.85□□□□□ -0.67
CCDC6-201ENST00000263102 SMIM11BQ8TCY0 68 aa10.85□□□□□ -0.67
CCDC6-201ENST00000263102 Q9BRP9 147 aa10.85□□□□□ -0.67
CCDC6-201ENST00000263102 EDN2P20800 178 aa10.85□□□□□ -0.67
CCDC6-201ENST00000263102 DEFB116Q30KQ4 102 aa10.85□□□□□ -0.67
CCDC6-201ENST00000263102 COX6A2Q02221 97 aa10.85□□□□□ -0.67
CCDC6-201ENST00000263102 V9GYY9 64 aa10.85□□□□□ -0.67
CCDC6-201ENST00000263102 SBSPONQ8IVN8 264 aa10.84□□□□□ -0.67
CCDC6-201ENST00000263102 ATP5EP2Q5VTU8 51 aa10.84□□□□□ -0.67
CCDC6-201ENST00000263102 ZFHX2Q9C0A1 2572 aaPredicted RBP10.84□□□□□ -0.67
CCDC6-201ENST00000263102 TNRC6AQ8NDV7 1962 aaKnown RBP10.84□□□□□ -0.67
CCDC6-201ENST00000263102 TSHBP01222 138 aa10.84□□□□□ -0.67
CCDC6-201ENST00000263102 FAM208BQ5VWN6 2430 aa10.84□□□□□ -0.67
CCDC6-201ENST00000263102 NLRC5Q86WI3 1866 aa10.83□□□□□ -0.68
CCDC6-201ENST00000263102 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
CCDC6-201ENST00000263102 KIF26AQ9ULI4 1882 aaPredicted RBP10.82□□□□□ -0.68
CCDC6-201ENST00000263102 NUP210Q8TEM1 1887 aaPredicted RBP10.82□□□□□ -0.68
CCDC6-201ENST00000263102 AVPP01185 164 aa10.81□□□□□ -0.68
CCDC6-201ENST00000263102 SPACA4Q8TDM5 124 aa10.81□□□□□ -0.68
CCDC6-201ENST00000263102 PYGO1Q9Y3Y4 419 aa10.81□□□□□ -0.68
CCDC6-201ENST00000263102 CDSNQ15517 529 aa10.8□□□□□ -0.68
CCDC6-201ENST00000263102 LINC00208Q96KT6 92 aa10.8□□□□□ -0.68
CCDC6-201ENST00000263102 LIMD2Q9BT23 127 aa10.8□□□□□ -0.68
CCDC6-201ENST00000263102 PRR9Q5T870 116 aa10.8□□□□□ -0.68
CCDC6-201ENST00000263102 COX17Q14061 63 aa10.8□□□□□ -0.68
CCDC6-201ENST00000263102 DSCAML1Q8TD84 2053 aa10.79□□□□□ -0.68
CCDC6-201ENST00000263102 IGKV2D-30A0A075B6S6 120 aa10.79□□□□□ -0.68
CCDC6-201ENST00000263102 IGKV2-30P06310 120 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms