RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
CHCHD3-201ENST00000262570 CRPP02741 224 aa11.13□□□□□ -0.63
CHCHD3-201ENST00000262570 G0S2P27469 103 aa11.13□□□□□ -0.63
CHCHD3-201ENST00000262570 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
CHCHD3-201ENST00000262570 CLPSL2Q6UWE3 100 aa11.12□□□□□ -0.63
CHCHD3-201ENST00000262570 ZNF664Q8N3J9 261 aa11.12□□□□□ -0.63
CHCHD3-201ENST00000262570 FAM104AQ969W3 186 aa11.12□□□□□ -0.63
CHCHD3-201ENST00000262570 PYGO1Q9Y3Y4 419 aa11.12□□□□□ -0.63
CHCHD3-201ENST00000262570 MIAQ16674 131 aa11.11□□□□□ -0.63
CHCHD3-201ENST00000262570 TOMM6Q96B49 74 aa11.11□□□□□ -0.63
CHCHD3-201ENST00000262570 FAT2Q9NYQ8 4349 aa11.1□□□□□ -0.63
CHCHD3-201ENST00000262570 MRPS36P82909 103 aaKnown RBP11.1□□□□□ -0.63
CHCHD3-201ENST00000262570 BAGE3Q86Y29 109 aa11.1□□□□□ -0.63
CHCHD3-201ENST00000262570 CHCHD1Q96BP2 118 aaKnown RBP11.1□□□□□ -0.63
CHCHD3-201ENST00000262570 OPRPNQ99935 248 aaPredicted RBP11.1□□□□□ -0.63
CHCHD3-201ENST00000262570 IGIPA6NJ69 53 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST1H2BKO60814 126 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST1H2BJP06899 126 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST1H2BOP23527 126 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST1H2BBP33778 126 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST1H2BDP58876 126 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST1H2BCP62807 126 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST2H2BEQ16778 126 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 Q6ZUT4 128 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST1H2BHQ93079 126 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 RMI2Q96E14 147 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST1H2BNQ99877 126 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 HIST1H2BMQ99879 126 aa11.09□□□□□ -0.63
CHCHD3-201ENST00000262570 IGKV2D-24A0A075B6R9 120 aa11.08□□□□□ -0.64
CHCHD3-201ENST00000262570 A0A096LNJ9 63 aa11.08□□□□□ -0.64
CHCHD3-201ENST00000262570 TRAV8-4A0A0B4J246 113 aa11.08□□□□□ -0.64
CHCHD3-201ENST00000262570 LINC01549A6NIU2 74 aa11.08□□□□□ -0.64
CHCHD3-201ENST00000262570 C1orf43Q9BWL3 253 aa11.08□□□□□ -0.64
CHCHD3-201ENST00000262570 TM2D2Q9BX73 214 aa11.08□□□□□ -0.64
CHCHD3-201ENST00000262570 COX11Q9Y6N1 276 aa11.08□□□□□ -0.64
CHCHD3-201ENST00000262570 IGLV4-3A0A075B6K6 122 aa11.07□□□□□ -0.64
CHCHD3-201ENST00000262570 IGKV3OR2-268A0A0C4DH90 116 aa11.07□□□□□ -0.64
CHCHD3-201ENST00000262570 NPSP0C0P6 89 aa11.07□□□□□ -0.64
CHCHD3-201ENST00000262570 RNASE13Q5GAN3 156 aaKnown RBP11.07□□□□□ -0.64
CHCHD3-201ENST00000262570 IGLV10-54A0A075B6I4 117 aa11.07□□□□□ -0.64
CHCHD3-201ENST00000262570 LINC00310P59036 64 aa11.07□□□□□ -0.64
CHCHD3-201ENST00000262570 PMCHL1Q16048 86 aa11.07□□□□□ -0.64
CHCHD3-201ENST00000262570 LINC00336Q6ZUF6 198 aa11.07□□□□□ -0.64
CHCHD3-201ENST00000262570 ERASQ7Z444 233 aa11.07□□□□□ -0.64
CHCHD3-201ENST00000262570 TIMM17AQ99595 171 aa11.07□□□□□ -0.64
CHCHD3-201ENST00000262570 LINC00959A0A1B0GUT2 108 aa11.06□□□□□ -0.64
CHCHD3-201ENST00000262570 HBDP02042 147 aa11.06□□□□□ -0.64
CHCHD3-201ENST00000262570 KRTAP26-1Q6PEX3 210 aa11.06□□□□□ -0.64
CHCHD3-201ENST00000262570 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
CHCHD3-201ENST00000262570 SCGB3A1Q96QR1 104 aa11.06□□□□□ -0.64
CHCHD3-201ENST00000262570 PSCAO43653 123 aa11.05□□□□□ -0.64
CHCHD3-201ENST00000262570 SERF1AO75920 110 aa11.05□□□□□ -0.64
CHCHD3-201ENST00000262570 MAPKAPK5-AS1Q8N8E1 139 aa11.05□□□□□ -0.64
CHCHD3-201ENST00000262570 C1orf196B1AJZ1 125 aa11.04□□□□□ -0.64
CHCHD3-201ENST00000262570 HSBP1O75506 76 aa11.04□□□□□ -0.64
CHCHD3-201ENST00000262570 TNP2Q05952 138 aa11.04□□□□□ -0.64
CHCHD3-201ENST00000262570 PRSS29PA6NIE9 313 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 CHCHD10Q8WYQ3 142 aaPredicted RBP11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 AMELXQ99217 191 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 TRAV13-1A0A0B4J241 112 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 CCL25O15444 150 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 NUPR1O60356 82 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 SS18Q15532 418 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 PDZD11Q5EBL8 140 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 Q6ZN92 141 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 TEX43Q6ZNM6 134 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 VCX2Q9H322 139 aa11.03□□□□□ -0.64
CHCHD3-201ENST00000262570 LINC00173Q6ZV60 143 aa11.02□□□□□ -0.65
CHCHD3-201ENST00000262570 FAM19A2Q8N3H0 131 aa11.02□□□□□ -0.65
CHCHD3-201ENST00000262570 DNAH11Q96DT5 4516 aa11.01□□□□□ -0.65
CHCHD3-201ENST00000262570 LRCOL1A6NCL2 159 aa11.01□□□□□ -0.65
CHCHD3-201ENST00000262570 IFITM10A6NMD0 228 aa11.01□□□□□ -0.65
CHCHD3-201ENST00000262570 ZC2HC1BQ5TFG8 222 aa11.01□□□□□ -0.65
CHCHD3-201ENST00000262570 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11□□□□□ -0.65
CHCHD3-201ENST00000262570 A0A087WTM6 91 aa10.99□□□□□ -0.65
CHCHD3-201ENST00000262570 GAGE12HA6NDE8 117 aa10.99□□□□□ -0.65
CHCHD3-201ENST00000262570 XCL1P47992 114 aa10.99□□□□□ -0.65
CHCHD3-201ENST00000262570 BAALCQ8WXS3 180 aa10.99□□□□□ -0.65
CHCHD3-201ENST00000262570 C2orf88Q9BSF0 95 aa10.99□□□□□ -0.65
CHCHD3-201ENST00000262570 FOXI1Q12951 378 aa10.99□□□□□ -0.65
CHCHD3-201ENST00000262570 COA6Q5JTJ3 125 aaKnown RBP10.99□□□□□ -0.65
CHCHD3-201ENST00000262570 CD164L2Q6UWJ8 174 aa10.99□□□□□ -0.65
CHCHD3-201ENST00000262570 PKD1P98161 4303 aa10.98□□□□□ -0.65
CHCHD3-201ENST00000262570 ATP5LO75964 103 aa10.98□□□□□ -0.65
CHCHD3-201ENST00000262570 UBE2D1P51668 147 aa10.98□□□□□ -0.65
CHCHD3-201ENST00000262570 WFDC2Q14508 124 aa10.98□□□□□ -0.65
CHCHD3-201ENST00000262570 LECT2O14960 151 aa10.96□□□□□ -0.65
CHCHD3-201ENST00000262570 NDUFA6P56556 154 aa10.96□□□□□ -0.65
CHCHD3-201ENST00000262570 PMVKQ15126 192 aa10.96□□□□□ -0.65
CHCHD3-201ENST00000262570 LINC00242Q5T6M2 205 aa10.96□□□□□ -0.65
CHCHD3-201ENST00000262570 FAM19A3Q7Z5A8 133 aa10.96□□□□□ -0.65
CHCHD3-201ENST00000262570 CST9LQ9H4G1 147 aa10.96□□□□□ -0.65
CHCHD3-201ENST00000262570 A0A1B0GVY2 172 aa10.95□□□□□ -0.66
CHCHD3-201ENST00000262570 TMA7Q9Y2S6 64 aaKnown RBP10.95□□□□□ -0.66
CHCHD3-201ENST00000262570 HECTD4Q9Y4D8 3996 aa10.95□□□□□ -0.66
CHCHD3-201ENST00000262570 IGHV3OR16-9A0A0B4J2B5 98 aa10.94□□□□□ -0.66
CHCHD3-201ENST00000262570 LEPROTL1O95214 131 aa10.94□□□□□ -0.66
CHCHD3-201ENST00000262570 IFI27L1Q96BM0 104 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms